FFCP PHASE1:Mm9::chr6:124790210..124790223,-: Difference between revisions
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|id=chr6:124790210..124790223,-
|short_description=p2@Gnb3
|description=CAGE_peak_2_at_Gnb3_5end
|association_with_transcript=69bp_to_ENSMUST00000024206,NM_013530,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14695 | |EntrezGene=14695 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=53 | |||
|TSSclassifier=NA | |||
|UniProt=Q61011,Q54AE3,Q8BMQ1 | |UniProt=Q61011,Q54AE3,Q8BMQ1 | ||
|association_with_transcript=69bp_to_ENSMUST00000024206,NM_013530,uc009dsd.1,uc009dse.1_5end | |||
|cluster_id=chr6:124790210..124790223,- | |||
|description=CAGE_peak_2_at_Gnb3_5end | |||
|id=chr6:124790210..124790223,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.08e-18!9;UBERON:0000019!1.08e-18!9;UBERON:0000047!1.08e-18!9;UBERON:0004088!1.08e-18!9;UBERON:0002104!1.08e-18!9;UBERON:0001456!1.08e-18!9;UBERON:0003072!1.08e-18!9;UBERON:0003071!1.08e-18!9;UBERON:0004128!1.08e-18!9;UBERON:0001444!5.23e-15!11;UBERON:0000020!1.26e-13!12;UBERON:0001032!1.26e-13!12;UBERON:0004456!1.26e-13!12;UBERON:0005085!1.86e-12!13;UBERON:0001894!5.32e-11!10;UBERON:0006222!5.32e-11!10;UBERON:0000007!1.43e-10!8;UBERON:0003296!1.43e-10!8;UBERON:0010133!1.43e-10!8;UBERON:0003056!9.37e-10!49;UBERON:0000033!8.79e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.11e-50,9;UBERON:0000019,5.11e-50,9;UBERON:0000047,5.11e-50,9;UBERON:0010312,5.11e-50,9;UBERON:0004088,5.11e-50,9;UBERON:0002104,5.11e-50,9;UBERON:0001456,5.11e-50,9;UBERON:0003072,5.11e-50,9;UBERON:0004128,5.11e-50,9;UBERON:0003071,5.11e-50,9;UBERON:0001444,5.06e-41,11;UBERON:0000020,1.20e-37,12;UBERON:0001032,1.20e-37,12;UBERON:0004456,1.20e-37,12;UBERON:0000033,8.68e-35,13;UBERON:0005085,8.68e-35,13;UBERON:0007811,8.84e-13,36;UBERON:0003056,1.11e-12,49;UBERON:0000153,9.82e-11,43;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0010371,1.47e-08,73;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,5.47148825304832,0,0.689706313300419,0.900310649026746,3.76762044589288,5.57899293040888,12.1708034270607,13.5867500611607,9.31332134660456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.540183282093931,1.4229455216103,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,5.47148825304832,0,0.689706313300419,0.900310649026746,3.76762044589288,5.57899293040888,12.1708034270607,13.5867500611607,9.31332134660456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.540183282093931,1.4229455216103,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p2@Gnb3 | |||
}} | }} |
Latest revision as of 16:19, 26 September 2015
Short description: | p2@Gnb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gnb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 69bp_to_ENSMUST00000024206, NM_013530, uc009dsd.1, uc009dse.1_5end |
EntrezGene: | Gnb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 5.11e-50 | 9 |
camera-type eye | 5.11e-50 | 9 |
simple eye | 5.11e-50 | 9 |
immature eye | 5.11e-50 | 9 |
ocular region | 5.11e-50 | 9 |
visual system | 5.11e-50 | 9 |
face | 5.11e-50 | 9 |
optic cup | 5.11e-50 | 9 |
optic vesicle | 5.11e-50 | 9 |
eye primordium | 5.11e-50 | 9 |
subdivision of head | 5.06e-41 | 11 |
sense organ | 1.20e-37 | 12 |
sensory system | 1.20e-37 | 12 |
entire sense organ system | 1.20e-37 | 12 |
head | 8.68e-35 | 13 |
ectodermal placode | 8.68e-35 | 13 |
craniocervical region | 8.84e-13 | 36 |
pre-chordal neural plate | 1.11e-12 | 49 |
anterior region of body | 9.82e-11 | 43 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
ecto-epithelium | 1.47e-08 | 73 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |