FFCP PHASE1:Mm9::chr7:3303827..3303834,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18752 | |EntrezGene=18752 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=Q2NKI4 | |UniProt=Q2NKI4 | ||
|association_with_transcript=56bp_to_ENSMUST00000172109_5end | |association_with_transcript=56bp_to_ENSMUST00000172109_5end | ||
|cluster_id=chr7:3303827..3303834,+ | |||
|description=CAGE_peak_4_at_Prkcc_5end | |description=CAGE_peak_4_at_Prkcc_5end | ||
|id=chr7:3303827..3303834,+ | |id=chr7:3303827..3303834,+ | ||
|ontology_enrichment_celltype=CL:0002610!1.35e-07!3;CL:0002614!7.47e-07!3 | |ontology_enrichment_celltype=CL:0002610!1.35e-07!3;CL:0002614!7.47e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.95e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.89e-23!50;UBERON:0006238!1.89e-23!50;UBERON:0002616!5.39e-22!49;UBERON:0001049!5.77e-18!52;UBERON:0005068!5.77e-18!52;UBERON:0006241!5.77e-18!52;UBERON:0007135!5.77e-18!52;UBERON:0001017!6.84e-18!73;UBERON:0005743!6.84e-18!73;UBERON:0000073!3.24e-17!75;UBERON:0001016!3.24e-17!75;UBERON:0000033!3.41e-17!63;UBERON:0002791!2.48e-13!29;UBERON:0003528!2.48e-13!29;UBERON:0001893!2.48e-13!29;UBERON:0003080!2.63e-13!40;UBERON:0002020!2.44e-12!34;UBERON:0002780!4.62e-12!39;UBERON:0001890!4.62e-12!39;UBERON:0006240!4.62e-12!39;UBERON:0002298!7.37e-12!6;UBERON:0002346!1.69e-11!71;UBERON:0003075!1.69e-11!71;UBERON:0007284!1.69e-11!71;UBERON:0007811!8.41e-11!86;UBERON:0004121!1.01e-10!102;UBERON:0000924!1.01e-10!102;UBERON:0006601!1.01e-10!102;UBERON:0002021!2.80e-10!10;UBERON:0000411!2.80e-10!10;UBERON:0001950!2.80e-10!10;UBERON:0003056!5.11e-10!49;UBERON:0000153!2.51e-09!94;UBERON:0002619!6.97e-09!17;UBERON:0002950!1.03e-08!4;UBERON:0001891!1.03e-08!4;UBERON:0009616!1.03e-08!4;UBERON:0000956!1.35e-08!21;UBERON:0001869!1.35e-08!21;UBERON:0000203!1.35e-08!21;UBERON:0004684!1.35e-07!3;UBERON:0002275!1.35e-07!3;UBERON:0000025!7.29e-07!114;UBERON:0002038!7.47e-07!3;UBERON:0002308!7.47e-07!3;UBERON:0009663!7.47e-07!3;UBERON:0009661!7.47e-07!3;UBERON:0006331!7.47e-07!3;UBERON:0000125!7.47e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.22e-17,54;UBERON:0002616,9.04e-14,46;UBERON:0000955,1.86e-13,47;UBERON:0006238,1.86e-13,47;UBERON:0001017,2.35e-12,73;UBERON:0001049,4.55e-12,52;UBERON:0005068,4.55e-12,52;UBERON:0006241,4.55e-12,52;UBERON:0007135,4.55e-12,52;UBERON:0001016,5.40e-12,75;UBERON:0000956,1.96e-11,21;UBERON:0001869,1.96e-11,21;UBERON:0000203,1.96e-11,21;UBERON:0002021,3.11e-11,10;UBERON:0000411,3.11e-11,10;UBERON:0001950,3.11e-11,10;UBERON:0004684,1.95e-10,3;UBERON:0002275,1.95e-10,3;UBERON:0002780,2.00e-10,39;UBERON:0001890,2.00e-10,39;UBERON:0006240,2.00e-10,39;UBERON:0003080,3.79e-10,40;UBERON:0002619,5.20e-10,17;UBERON:0002346,1.30e-09,64;UBERON:0003075,1.30e-09,64;UBERON:0007284,1.30e-09,64;UBERON:0004121,3.29e-09,95;UBERON:0000924,3.29e-09,95;UBERON:0006601,3.29e-09,95;UBERON:0010371,2.70e-08,73;UBERON:0003528,3.37e-08,29;UBERON:0002791,3.37e-08,29;UBERON:0001893,3.37e-08,29;UBERON:0003056,3.78e-08,49;UBERON:0001851,8.96e-08,1;UBERON:0005889,8.96e-08,1;UBERON:0002037,9.02e-08,4;UBERON:0002680,9.02e-08,4;UBERON:0001895,9.02e-08,4;UBERON:0010092,9.02e-08,4;UBERON:0006215,9.02e-08,4;UBERON:0002020,6.06e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30347642998166,2.29837208553338,0.614426133024974,0,0,0,0.279182999001381,0.56276261003168,0.763991238884051,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,2.63502717310392,1.67557365450764,0,0,0,0,0.898743836428936,0.457500602818626,0.251308704225729,2.08589184230732,1.27857728665165,1.87009240103604,1.1356888414743,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.68231958851302,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.38097570952153,1.71868654031819,0.68741272937475,0,2.2661816921691,0.675022500231806,0,0.906284817968409,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30347642998166,2.29837208553338,0.614426133024974,0,0,0,0.279182999001381,0.56276261003168,0.763991238884051,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,2.63502717310392,1.67557365450764,0,0,0,0,0.898743836428936,0.457500602818626,0.251308704225729,2.08589184230732,1.27857728665165,1.87009240103604,1.1356888414743,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.68231958851302,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.38097570952153,1.71868654031819,0.68741272937475,0,2.2661816921691,0.675022500231806,0,0.906284817968409,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p4@Prkcc | |short_description=p4@Prkcc | ||
}} | }} |
Latest revision as of 16:13, 26 September 2015
Short description: | p4@Prkcc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Prkcc_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 56bp_to_ENSMUST00000172109_5end |
EntrezGene: | Prkcc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.95e-10 | 3 |