FFCP PHASE1:Mm9::chr7:3289201..3289213,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:3289201..3289213,+ to FFCP PHASE1:Mm9::chr7:3289201..3289213,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=50918 | |EntrezGene=50918 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O35682,Q0VE46 | |UniProt=O35682,Q0VE46 | ||
|association_with_transcript=162bp_to_ENSMUST00000164553,NM_001093764,uc009eup.1_5end | |||
|cluster_id=chr7:3289201..3289213,+ | |||
|description=CAGE_peak_12_at_Myadm_5end | |||
|id=chr7:3289201..3289213,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.65e-07,23;CL:0000337,8.65e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.17e-09!52;UBERON:0005068!9.17e-09!52;UBERON:0006241!9.17e-09!52;UBERON:0007135!9.17e-09!52;UBERON:0002346!1.19e-08!71;UBERON:0003075!1.19e-08!71;UBERON:0007284!1.19e-08!71;UBERON:0001017!1.96e-08!73;UBERON:0005743!1.96e-08!73;UBERON:0000073!8.03e-08!75;UBERON:0001016!8.03e-08!75;UBERON:0002021!2.31e-07!10;UBERON:0000411!2.31e-07!10;UBERON:0001950!2.31e-07!10;UBERON:0002616!2.53e-07!49;UBERON:0002020!3.01e-07!34;UBERON:0004121!7.54e-07!102;UBERON:0000924!7.54e-07!102;UBERON:0006601!7.54e-07!102;UBERON:0000955!7.61e-07!50;UBERON:0006238!7.61e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.73e-14,10;UBERON:0000411,2.73e-14,10;UBERON:0001950,2.73e-14,10;UBERON:0002020,3.28e-13,34;UBERON:0000073,7.18e-11,54;UBERON:0002619,1.80e-09,17;UBERON:0001017,4.02e-09,73;UBERON:0001049,4.15e-09,52;UBERON:0005068,4.15e-09,52;UBERON:0006241,4.15e-09,52;UBERON:0007135,4.15e-09,52;UBERON:0001948,5.35e-09,5;UBERON:0002315,5.35e-09,5;UBERON:0000956,8.16e-09,21;UBERON:0001869,8.16e-09,21;UBERON:0000203,8.16e-09,21;UBERON:0001016,1.04e-08,75;UBERON:0003528,6.64e-08,29;UBERON:0002791,6.64e-08,29;UBERON:0001893,6.64e-08,29;UBERON:0002240,2.08e-07,6;UBERON:0005174,2.08e-07,6;UBERON:0001137,2.08e-07,6;UBERON:0002780,4.15e-07,39;UBERON:0001890,4.15e-07,39;UBERON:0006240,4.15e-07,39;UBERON:0003080,7.71e-07,40 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0.340173160604279,0.198581902401771,0.522399578277871,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,2.35292595212406,0.683045484958446,0,0.629484089877886,0.405507724878058,0,0,0.436050312760893,0.878744730937887,0.58328969722285,0,1.43752564364972,0,0,0,0.257259436035947,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0.449949858640699,0,0,0.898800331555214,0.384218305321555,0.207379224616955,0.405017814995072,0.210324961351382,3.14216082844184,3.53389665522582,0,0.191690942036473,0,3.30347642998166,0.766124028511126,1.38245879930619,0.263772575460388,0.365950574409639,0,1.3959149950069,0.56276261003168,1.22238598221448,2.35702868378934,1.70846016958924,1.1183966749518,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0.35333957451034,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,1.21439728736295,0.304465478312141,1.15307748628029,0.452167921657868,0.587943535678524,0,1.48316980640624,0.722996784599558,0,0.808834249737046,0,0,0,0.585561594023094,0.628340120440365,0.255457055208591,0.359445373517761,0,0.508280908292259,0.599162557619291,0,0.376963056338593,2.08589184230732,2.04572365864264,2.49345653471472,0.811206315338788,2.13862664085664,0,0,0,0.520481771850815,0.919608417733892,0.720248519221397,0.452114453507145,0.612328492361951,0.384341160854549,0.468508622798644,0,0.215567992932842,0.378212160335639,3.34307135911503,3.72632745126877,2.50242524303038,1.74126083261083,0.61734640922383,0.398068533636986,0,0,0.284163499395593,0.207125772535502,0.234526059981096,0,0.946978942340841,0.196764231747404,1.07986979021165,1.16266972375204,1.3413670069981,0.350296027101508,1.15191894939436,0.985004784474571,0.486412857275134,0.730999937126662,0,0.402619256281115,3.36463917702604,0.308713837137853,0,0.264450566663544,1.91959425481711,1.16118335930219,1.15980715189884,0.605050573870028,0.667134131534611,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.569003702859245,0.456994050438915,1.1270773567308,0,0.387904974335251,0.420814919341911,0.379419222745544,0.295220295959204,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0.184753190166605,0.947457058852424,0.488894929326078,0.339490171550376,0,0.167506257441816,1.19021820443007,0.585400943573396,0.945810864637146,1.10732344824387,0.637819074629948,0.655453258862952,0,0.144649058581512,0,0,0,0,0.963303539926752,0.937693492737625,0.327869890753351,0.252470927204373,0.315508219416257,0,0.646270193198397,0.238968797952552,0,0.283076530788832,0,0,0,0,0.141940085208269,3.38324646967785,1.62886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.532020700926821,0.535106452806212,0.658196082408484,1.522324745573,0.23467170806371,0.63549621259146,0,0,0.484393280087717,0.361877549568935,0.119372344003136,0,0.291480836629851,0.927126510052548,0,0.82554747185289,0.370389054739423,0.188368457004691,0,0.228778173206523,0.509935289981566,0.559805809294632,0.690999869022119,0,1.26534397432454,1.42323626988794,0.756037385752609,0.418176592028937,0.655087691238533,0.944050424693745,0.578574190077352,0,0.259229946583586,0,0,1.19613236835183,0.496375471371293,0.583353565032143,0.774958940866387,0.506868376472335,1.40828686374905,0.911430693907651,0,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0.665957860122194,0.0897138566094757,0.167884616364078,0.19318959403219,0.563047426353546,0.183151624267265,0.214368379079066,0,5.0827665835536,5.06357760157895,4.01026859407578,3.43706364687375,2.05524755931193,1.5107877947794,0.675022500231806,2.2516060161211,1.35942722695261,3.10656187051092,0.31136204275253,0.399024873401031,1.53660245178721,0.972426868273176,0.628839487883947,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,1.26348605881899,0.50695859978048,0.754505365544305,0.561849044819294,0.448176066834085,0.804096565378586,0.952587382566147,0.463537303779422,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,1.24233064311536,0,0.726732083161643,0.752875043322645,0.761531471025089,0.914639864363863,0.263069711437843,0.271608227691724,0.561142271657738,0.711810108745045,0.29551344712669,0.818462086339379,0.464810523557898,0.385813221962283,1.74867404556562,0.467863216890817,0.859484216193193,0.382576664137687,0.441182838239031,0.927471342481686 | |phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0.340173160604279,0.198581902401771,0.522399578277871,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,2.35292595212406,0.683045484958446,0,0.629484089877886,0.405507724878058,0,0,0.436050312760893,0.878744730937887,0.58328969722285,0,1.43752564364972,0,0,0,0.257259436035947,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0.449949858640699,0,0,0.898800331555214,0.384218305321555,0.207379224616955,0.405017814995072,0.210324961351382,3.14216082844184,3.53389665522582,0,0.191690942036473,0,3.30347642998166,0.766124028511126,1.38245879930619,0.263772575460388,0.365950574409639,0,1.3959149950069,0.56276261003168,1.22238598221448,2.35702868378934,1.70846016958924,1.1183966749518,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0.35333957451034,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,1.21439728736295,0.304465478312141,1.15307748628029,0.452167921657868,0.587943535678524,0,1.48316980640624,0.722996784599558,0,0.808834249737046,0,0,0,0.585561594023094,0.628340120440365,0.255457055208591,0.359445373517761,0,0.508280908292259,0.599162557619291,0,0.376963056338593,2.08589184230732,2.04572365864264,2.49345653471472,0.811206315338788,2.13862664085664,0,0,0,0.520481771850815,0.919608417733892,0.720248519221397,0.452114453507145,0.612328492361951,0.384341160854549,0.468508622798644,0,0.215567992932842,0.378212160335639,3.34307135911503,3.72632745126877,2.50242524303038,1.74126083261083,0.61734640922383,0.398068533636986,0,0,0.284163499395593,0.207125772535502,0.234526059981096,0,0.946978942340841,0.196764231747404,1.07986979021165,1.16266972375204,1.3413670069981,0.350296027101508,1.15191894939436,0.985004784474571,0.486412857275134,0.730999937126662,0,0.402619256281115,3.36463917702604,0.308713837137853,0,0.264450566663544,1.91959425481711,1.16118335930219,1.15980715189884,0.605050573870028,0.667134131534611,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.569003702859245,0.456994050438915,1.1270773567308,0,0.387904974335251,0.420814919341911,0.379419222745544,0.295220295959204,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0.184753190166605,0.947457058852424,0.488894929326078,0.339490171550376,0,0.167506257441816,1.19021820443007,0.585400943573396,0.945810864637146,1.10732344824387,0.637819074629948,0.655453258862952,0,0.144649058581512,0,0,0,0,0.963303539926752,0.937693492737625,0.327869890753351,0.252470927204373,0.315508219416257,0,0.646270193198397,0.238968797952552,0,0.283076530788832,0,0,0,0,0.141940085208269,3.38324646967785,1.62886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.532020700926821,0.535106452806212,0.658196082408484,1.522324745573,0.23467170806371,0.63549621259146,0,0,0.484393280087717,0.361877549568935,0.119372344003136,0,0.291480836629851,0.927126510052548,0,0.82554747185289,0.370389054739423,0.188368457004691,0,0.228778173206523,0.509935289981566,0.559805809294632,0.690999869022119,0,1.26534397432454,1.42323626988794,0.756037385752609,0.418176592028937,0.655087691238533,0.944050424693745,0.578574190077352,0,0.259229946583586,0,0,1.19613236835183,0.496375471371293,0.583353565032143,0.774958940866387,0.506868376472335,1.40828686374905,0.911430693907651,0,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0.665957860122194,0.0897138566094757,0.167884616364078,0.19318959403219,0.563047426353546,0.183151624267265,0.214368379079066,0,5.0827665835536,5.06357760157895,4.01026859407578,3.43706364687375,2.05524755931193,1.5107877947794,0.675022500231806,2.2516060161211,1.35942722695261,3.10656187051092,0.31136204275253,0.399024873401031,1.53660245178721,0.972426868273176,0.628839487883947,0.367687016900028,0.222246727801615,0.412070114477788,0.64183841918363,1.26348605881899,0.50695859978048,0.754505365544305,0.561849044819294,0.448176066834085,0.804096565378586,0.952587382566147,0.463537303779422,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,1.24233064311536,0,0.726732083161643,0.752875043322645,0.761531471025089,0.914639864363863,0.263069711437843,0.271608227691724,0.561142271657738,0.711810108745045,0.29551344712669,0.818462086339379,0.464810523557898,0.385813221962283,1.74867404556562,0.467863216890817,0.859484216193193,0.382576664137687,0.441182838239031,0.927471342481686 | ||
|short_description=p12@Myadm | |||
}} | }} |
Latest revision as of 16:03, 26 September 2015
Short description: | p12@Myadm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Myadm_5end |
Coexpression cluster: | NA |
Association with transcript: | 162bp_to_ENSMUST00000164553, NM_001093764, uc009eup.1_5end |
EntrezGene: | Myadm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.65e-07 | 23 |
neuroblast (sensu Vertebrata) | 8.65e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.73e-14 | 10 |
visual cortex | 2.73e-14 | 10 |
neocortex | 2.73e-14 | 10 |
gray matter | 3.28e-13 | 34 |
regional part of nervous system | 7.18e-11 | 54 |
regional part of cerebral cortex | 1.80e-09 | 17 |
central nervous system | 4.02e-09 | 73 |
neural tube | 4.15e-09 | 52 |
neural rod | 4.15e-09 | 52 |
future spinal cord | 4.15e-09 | 52 |
neural keel | 4.15e-09 | 52 |
regional part of spinal cord | 5.35e-09 | 5 |
gray matter of spinal cord | 5.35e-09 | 5 |
cerebral cortex | 8.16e-09 | 21 |
cerebral hemisphere | 8.16e-09 | 21 |
pallium | 8.16e-09 | 21 |
nervous system | 1.04e-08 | 75 |
brain grey matter | 6.64e-08 | 29 |
regional part of telencephalon | 6.64e-08 | 29 |
telencephalon | 6.64e-08 | 29 |
spinal cord | 2.08e-07 | 6 |
dorsal region element | 2.08e-07 | 6 |
dorsum | 2.08e-07 | 6 |
regional part of forebrain | 4.15e-07 | 39 |
forebrain | 4.15e-07 | 39 |
future forebrain | 4.15e-07 | 39 |
anterior neural tube | 7.71e-07 | 40 |