FFCP PHASE1:Mm9::chr10:96942053..96942066,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=13179|HGNC=|MCL_coexpression_id=2611|UniProt=P28654,Q3UKR1|association_with_transcript=-67bp_to_NM_001190451,uc007gwx.2_5end|description=CAGE_peak_9_at_Dcn_5end|id=chr10:96942053..96942066,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,7.02e-15,6;CL:0000187,7.02e-15,6;CL:0000056,7.02e-15,6;CL:0000222,1.01e-12,7;CL:0000192,5.96e-12,3;CL:0000359,5.96e-12,3;CL:0002539,5.96e-12,3;CL:0000514,5.96e-12,3;CL:0000355,7.79e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!7.81e-09!26;UBERON:0000990!7.81e-09!26;UBERON:0003133!1.67e-07!24;UBERON:0004176!6.41e-07!17;UBERON:0009196!6.41e-07!17;UBERON:0009117!6.41e-07!17;UBERON:0003102!9.32e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000947,2.04e-15,4;UBERON:0001637,2.04e-15,4;UBERON:0004573,2.04e-15,4;UBERON:0003509,2.04e-15,4;UBERON:0004571,2.04e-15,4;UBERON:0010191,2.04e-15,4;UBERON:0004572,2.04e-15,4;UBERON:0004535,1.20e-13,23;UBERON:0001009,1.20e-13,23;UBERON:0004872,4.99e-13,33;UBERON:0000383,1.55e-12,10;UBERON:0000055,2.38e-12,5;UBERON:0007500,2.38e-12,5;UBERON:0001981,2.38e-12,5;UBERON:0002049,2.38e-12,5;UBERON:0007798,2.38e-12,5;UBERON:0004537,2.38e-12,5;UBERON:0006965,2.38e-12,5;UBERON:0001135,5.96e-12,3;UBERON:0004237,5.96e-12,3;UBERON:0004695,5.96e-12,3;UBERON:0002111,5.96e-12,3;UBERON:0004178,5.96e-12,3;UBERON:0003914,3.42e-10,47;UBERON:0001134,7.79e-10,9;UBERON:0002036,7.79e-10,9;UBERON:0002385,7.79e-10,9;UBERON:0000486,7.79e-10,9;UBERON:0007503,7.79e-10,9;UBERON:0001015,7.79e-10,9;UBERON:0002329,7.79e-10,9;UBERON:0003082,7.79e-10,9;UBERON:0003059,7.79e-10,9;UBERON:0007282,7.79e-10,9;UBERON:0004290,7.79e-10,9;UBERON:0009618,7.79e-10,9;UBERON:0000165,4.34e-08,2;UBERON:0000166,4.34e-08,2;UBERON:0000930,4.34e-08,2;UBERON:0007524,5.39e-08,11;UBERON:0003077,5.39e-08,11;UBERON:0007285,5.39e-08,11;UBERON:0000080,7.59e-08,4;UBERON:0005904,7.59e-08,4;UBERON:0006947,7.59e-08,4;UBERON:0002120,7.59e-08,4;UBERON:0004054,7.59e-08,4;UBERON:0004875,7.59e-08,4;UBERON:0004876,7.59e-08,4;UBERON:0005721,7.59e-08,4;UBERON:0005754,7.59e-08,4;UBERON:0007297,7.59e-08,4;UBERON:0001343,1.42e-07,2;UBERON:0004910,1.42e-07,2;UBERON:0004909,1.42e-07,2;UBERON:0005154,1.42e-07,2;UBERON:0005295,1.42e-07,2;UBERON:0005297,1.42e-07,2;UBERON:0005294,1.42e-07,2;UBERON:0010141,1.42e-07,2;UBERON:0005891,1.42e-07,2;UBERON:0010147,1.79e-07,2;UBERON:0003937,1.79e-07,2;UBERON:0005399,1.79e-07,2;UBERON:0005256,1.84e-07,45;UBERON:0000161,6.77e-07,5|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16176953699867,4.8660926985367,1.46837401729345,0,0,0,0,0,0,0,0,0,0.514518872071894,1.43266719969378,1.03134418455488,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0,0.579728977403356,2.58127163094416,0,0,0,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0.517875767294343,1.63286352971307,0,0,0,0.150722640552623,0.470354828542819,0.376999773989026,0,2.31358971071859,0,0.970601099684455,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,1.12023300235348,1.11966273549084,0.505445516867349,1.68353484709179,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.655912071918102,1.29351685369508,0,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.32833492815819,1.05389452409612,1.31579988682799,1.09775057645525,1.47627060636409,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0.949058123089023,0.164698954724011,0,0,0.38992817423824,0,0.432276099749388,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.252946148497029,0.442830443938806,0.156998727841375,0.123397163921801,0.296452627087149,0,0.393117990226406,0,0,0,0,0,0.486405680325106,0,0,0,0.624075346229121,0.757736633841335,0.717589654087649,0,0.369506380333209,0,0.325929952884052,0,0,0.167506257441816,0,0,0,0.44292937929755,0.159454768657487,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,0,0,0.327869890753351,1.76729649043061,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0.35613120733451,0.977321756121456,1.64970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0.316036757935816,0,1.03135543248187,1.02131881726136,0.18006109403131,0,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0,0.23467170806371,0,1.32317038832977,0.49465875882444,0.322928853391811,0.301564624640779,0.358117032009409,0.328281799490123,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.826534557253359,0.523511883968059,0.388844919875379,1.24267862617385,0,0.149516546043979,0,0.583353565032143,0.387479470433193,1.01373675294467,0.58678619322877,0.5208175393758,0.419437377702843,0.483168241652012,0.576060012515731,0.632022241256357,0.202725215290164,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0.116876902181569,2.0405734525369,0,0,0,0.772758376128762,0.375364950902364,0.549454872801795,0.857473516316263,1.00314420807073,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.50695859978048,0.377252682772152,0.0936415074698824,0.128050304809739,0.287177344778066,0.476293691283074,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0,0,0.271608227691724,0,0,0.197008964751127,0,0,0.385813221962283,0,0.467863216890817,0.429742108096597,0.57386499620653,0.882365676478062,1.85494268496337|short_description=p9@Dcn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13179 | |||
|HGNC= | |||
|MCL_coexpression_id=2611 | |||
|TSSclassifier=NA | |||
|UniProt=P28654,Q3UKR1 | |||
|association_with_transcript=-67bp_to_NM_001190451,uc007gwx.2_5end | |||
|cluster_id=chr10:96942053..96942066,+ | |||
|description=CAGE_peak_9_at_Dcn_5end | |||
|id=chr10:96942053..96942066,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.02e-15,6;CL:0000187,7.02e-15,6;CL:0000056,7.02e-15,6;CL:0000222,1.01e-12,7;CL:0000192,5.96e-12,3;CL:0000359,5.96e-12,3;CL:0002539,5.96e-12,3;CL:0000514,5.96e-12,3;CL:0000355,7.79e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!7.81e-09!26;UBERON:0000990!7.81e-09!26;UBERON:0003133!1.67e-07!24;UBERON:0004176!6.41e-07!17;UBERON:0009196!6.41e-07!17;UBERON:0009117!6.41e-07!17;UBERON:0003102!9.32e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,2.04e-15,4;UBERON:0001637,2.04e-15,4;UBERON:0004573,2.04e-15,4;UBERON:0003509,2.04e-15,4;UBERON:0004571,2.04e-15,4;UBERON:0010191,2.04e-15,4;UBERON:0004572,2.04e-15,4;UBERON:0004535,1.20e-13,23;UBERON:0001009,1.20e-13,23;UBERON:0004872,4.99e-13,33;UBERON:0000383,1.55e-12,10;UBERON:0000055,2.38e-12,5;UBERON:0007500,2.38e-12,5;UBERON:0001981,2.38e-12,5;UBERON:0002049,2.38e-12,5;UBERON:0007798,2.38e-12,5;UBERON:0004537,2.38e-12,5;UBERON:0006965,2.38e-12,5;UBERON:0001135,5.96e-12,3;UBERON:0004237,5.96e-12,3;UBERON:0004695,5.96e-12,3;UBERON:0002111,5.96e-12,3;UBERON:0004178,5.96e-12,3;UBERON:0003914,3.42e-10,47;UBERON:0001134,7.79e-10,9;UBERON:0002036,7.79e-10,9;UBERON:0002385,7.79e-10,9;UBERON:0000486,7.79e-10,9;UBERON:0007503,7.79e-10,9;UBERON:0001015,7.79e-10,9;UBERON:0002329,7.79e-10,9;UBERON:0003082,7.79e-10,9;UBERON:0003059,7.79e-10,9;UBERON:0007282,7.79e-10,9;UBERON:0004290,7.79e-10,9;UBERON:0009618,7.79e-10,9;UBERON:0000165,4.34e-08,2;UBERON:0000166,4.34e-08,2;UBERON:0000930,4.34e-08,2;UBERON:0007524,5.39e-08,11;UBERON:0003077,5.39e-08,11;UBERON:0007285,5.39e-08,11;UBERON:0000080,7.59e-08,4;UBERON:0005904,7.59e-08,4;UBERON:0006947,7.59e-08,4;UBERON:0002120,7.59e-08,4;UBERON:0004054,7.59e-08,4;UBERON:0004875,7.59e-08,4;UBERON:0004876,7.59e-08,4;UBERON:0005721,7.59e-08,4;UBERON:0005754,7.59e-08,4;UBERON:0007297,7.59e-08,4;UBERON:0001343,1.42e-07,2;UBERON:0004910,1.42e-07,2;UBERON:0004909,1.42e-07,2;UBERON:0005154,1.42e-07,2;UBERON:0005295,1.42e-07,2;UBERON:0005297,1.42e-07,2;UBERON:0005294,1.42e-07,2;UBERON:0010141,1.42e-07,2;UBERON:0005891,1.42e-07,2;UBERON:0010147,1.79e-07,2;UBERON:0003937,1.79e-07,2;UBERON:0005399,1.79e-07,2;UBERON:0005256,1.84e-07,45;UBERON:0000161,6.77e-07,5 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16176953699867,4.8660926985367,1.46837401729345,0,0,0,0,0,0,0,0,0,0.514518872071894,1.43266719969378,1.03134418455488,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0,0.579728977403356,2.58127163094416,0,0,0,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0.517875767294343,1.63286352971307,0,0,0,0.150722640552623,0.470354828542819,0.376999773989026,0,2.31358971071859,0,0.970601099684455,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,1.12023300235348,1.11966273549084,0.505445516867349,1.68353484709179,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.655912071918102,1.29351685369508,0,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.32833492815819,1.05389452409612,1.31579988682799,1.09775057645525,1.47627060636409,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0.949058123089023,0.164698954724011,0,0,0.38992817423824,0,0.432276099749388,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.252946148497029,0.442830443938806,0.156998727841375,0.123397163921801,0.296452627087149,0,0.393117990226406,0,0,0,0,0,0.486405680325106,0,0,0,0.624075346229121,0.757736633841335,0.717589654087649,0,0.369506380333209,0,0.325929952884052,0,0,0.167506257441816,0,0,0,0.44292937929755,0.159454768657487,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,0,0,0.327869890753351,1.76729649043061,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0.35613120733451,0.977321756121456,1.64970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0.316036757935816,0,1.03135543248187,1.02131881726136,0.18006109403131,0,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0,0.23467170806371,0,1.32317038832977,0.49465875882444,0.322928853391811,0.301564624640779,0.358117032009409,0.328281799490123,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.826534557253359,0.523511883968059,0.388844919875379,1.24267862617385,0,0.149516546043979,0,0.583353565032143,0.387479470433193,1.01373675294467,0.58678619322877,0.5208175393758,0.419437377702843,0.483168241652012,0.576060012515731,0.632022241256357,0.202725215290164,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0.116876902181569,2.0405734525369,0,0,0,0.772758376128762,0.375364950902364,0.549454872801795,0.857473516316263,1.00314420807073,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.50695859978048,0.377252682772152,0.0936415074698824,0.128050304809739,0.287177344778066,0.476293691283074,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0,0,0.271608227691724,0,0,0.197008964751127,0,0,0.385813221962283,0,0.467863216890817,0.429742108096597,0.57386499620653,0.882365676478062,1.85494268496337 | |||
|short_description=p9@Dcn | |||
}} |
Latest revision as of 15:27, 26 September 2015
Short description: | p9@Dcn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Dcn_5end |
Coexpression cluster: | MCL_coexpression_mm9:2611 |
Association with transcript: | -67bp_to_NM_001190451, uc007gwx.2_5end |
EntrezGene: | Dcn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.02e-15 | 6 |
muscle cell | 7.02e-15 | 6 |
myoblast | 7.02e-15 | 6 |
mesodermal cell | 1.01e-12 | 7 |
smooth muscle cell | 5.96e-12 | 3 |
vascular associated smooth muscle cell | 5.96e-12 | 3 |
aortic smooth muscle cell | 5.96e-12 | 3 |
smooth muscle myoblast | 5.96e-12 | 3 |
multi-potent skeletal muscle stem cell | 7.79e-10 | 9 |