FFCP PHASE1:Mm9::chr9:40184415..40184432,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=235283 | |EntrezGene=235283 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=617 | |MCL_coexpression_id=617 | ||
|TSSclassifier=NA | |||
|UniProt=Q80TI0 | |UniProt=Q80TI0 | ||
|association_with_transcript=-409bp_to_uc009ozp.1_5end | |association_with_transcript=-409bp_to_uc009ozp.1_5end | ||
|cluster_id=chr9:40184415..40184432,- | |||
|description=CAGE_peak_27_at_Gramd1b_5end | |description=CAGE_peak_27_at_Gramd1b_5end | ||
|id=chr9:40184415..40184432,- | |id=chr9:40184415..40184432,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.09e-14,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.57e-20!63;UBERON:0000955!8.94e-16!50;UBERON:0006238!8.94e-16!50;UBERON:0002346!3.68e-15!71;UBERON:0003075!3.68e-15!71;UBERON:0007284!3.68e-15!71;UBERON:0002616!1.37e-14!49;UBERON:0004121!8.19e-14!102;UBERON:0000924!8.19e-14!102;UBERON:0006601!8.19e-14!102;UBERON:0007811!1.38e-13!86;UBERON:0003056!2.21e-12!49;UBERON:0000153!1.14e-11!94;UBERON:0001049!1.20e-11!52;UBERON:0005068!1.20e-11!52;UBERON:0006241!1.20e-11!52;UBERON:0007135!1.20e-11!52;UBERON:0001017!1.65e-11!73;UBERON:0005743!1.65e-11!73;UBERON:0000073!5.32e-11!75;UBERON:0001016!5.32e-11!75;UBERON:0000970!2.83e-08!9;UBERON:0000019!2.83e-08!9;UBERON:0000047!2.83e-08!9;UBERON:0004088!2.83e-08!9;UBERON:0002104!2.83e-08!9;UBERON:0001456!2.83e-08!9;UBERON:0003072!2.83e-08!9;UBERON:0003071!2.83e-08!9;UBERON:0004128!2.83e-08!9;UBERON:0004733!9.97e-08!6;UBERON:0004732!9.97e-08!6;UBERON:0002028!9.97e-08!6;UBERON:0007277!9.97e-08!6;UBERON:0002298!1.06e-07!6;UBERON:0003080!5.45e-07!40;UBERON:0005085!7.30e-07!13;UBERON:0002791!9.61e-07!29;UBERON:0003528!9.61e-07!29;UBERON:0001893!9.61e-07!29 | |ontology_enrichment_uberon=UBERON:0000033!1.57e-20!63;UBERON:0000955!8.94e-16!50;UBERON:0006238!8.94e-16!50;UBERON:0002346!3.68e-15!71;UBERON:0003075!3.68e-15!71;UBERON:0007284!3.68e-15!71;UBERON:0002616!1.37e-14!49;UBERON:0004121!8.19e-14!102;UBERON:0000924!8.19e-14!102;UBERON:0006601!8.19e-14!102;UBERON:0007811!1.38e-13!86;UBERON:0003056!2.21e-12!49;UBERON:0000153!1.14e-11!94;UBERON:0001049!1.20e-11!52;UBERON:0005068!1.20e-11!52;UBERON:0006241!1.20e-11!52;UBERON:0007135!1.20e-11!52;UBERON:0001017!1.65e-11!73;UBERON:0005743!1.65e-11!73;UBERON:0000073!5.32e-11!75;UBERON:0001016!5.32e-11!75;UBERON:0000970!2.83e-08!9;UBERON:0000019!2.83e-08!9;UBERON:0000047!2.83e-08!9;UBERON:0004088!2.83e-08!9;UBERON:0002104!2.83e-08!9;UBERON:0001456!2.83e-08!9;UBERON:0003072!2.83e-08!9;UBERON:0003071!2.83e-08!9;UBERON:0004128!2.83e-08!9;UBERON:0004733!9.97e-08!6;UBERON:0004732!9.97e-08!6;UBERON:0002028!9.97e-08!6;UBERON:0007277!9.97e-08!6;UBERON:0002298!1.06e-07!6;UBERON:0003080!5.45e-07!40;UBERON:0005085!7.30e-07!13;UBERON:0002791!9.61e-07!29;UBERON:0003528!9.61e-07!29;UBERON:0001893!9.61e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.09e-14,3;UBERON:0002275,1.09e-14,3;UBERON:0004733,2.32e-13,6;UBERON:0004732,2.32e-13,6;UBERON:0002028,2.32e-13,6;UBERON:0007277,2.32e-13,6;UBERON:0000073,1.27e-12,54;UBERON:0001017,3.75e-12,73;UBERON:0004121,6.38e-12,95;UBERON:0000924,6.38e-12,95;UBERON:0006601,6.38e-12,95;UBERON:0001016,9.13e-12,75;UBERON:0001896,1.60e-10,2;UBERON:0002298,1.60e-10,2;UBERON:0005290,1.60e-10,2;UBERON:0010096,1.60e-10,2;UBERON:0002346,1.90e-10,64;UBERON:0003075,1.90e-10,64;UBERON:0007284,1.90e-10,64;UBERON:0000955,2.04e-10,47;UBERON:0006238,2.04e-10,47;UBERON:0003076,5.44e-10,12;UBERON:0003057,5.44e-10,12;UBERON:0001049,3.44e-09,52;UBERON:0005068,3.44e-09,52;UBERON:0006241,3.44e-09,52;UBERON:0007135,3.44e-09,52;UBERON:0010371,6.65e-09,73;UBERON:0002616,1.05e-08,46;UBERON:0007023,9.34e-08,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,1.1665793944457,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,2.29837208553338,3.07213066512487,0,0,0,1.3959149950069,0,0.61119299110724,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,4.68449275218475,5.86450779077674,0,0,0,0,2.24685959107234,0.457500602818626,0,0.695297280769106,0.255715457330331,1.45451631191692,1.62241263067758,0.203678727700633,0.124406970610093,2.27450482590307,12.2056276414155,0,0,0.180062129805349,0.30140963567143,0.340182495756639,0.384341160854549,0.374806898238915,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,2.24770825982909,2.46144541843627,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0.329940245945071,0,0,0,0,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10264199027481,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,1.1665793944457,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,2.29837208553338,3.07213066512487,0,0,0,1.3959149950069,0,0.61119299110724,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,4.68449275218475,5.86450779077674,0,0,0,0,2.24685959107234,0.457500602818626,0,0.695297280769106,0.255715457330331,1.45451631191692,1.62241263067758,0.203678727700633,0.124406970610093,2.27450482590307,12.2056276414155,0,0,0.180062129805349,0.30140963567143,0.340182495756639,0.384341160854549,0.374806898238915,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,2.24770825982909,2.46144541843627,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0.329940245945071,0,0,0,0,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10264199027481,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p27@Gramd1b | |short_description=p27@Gramd1b | ||
}} | }} |
Latest revision as of 15:11, 26 September 2015
Short description: | p27@Gramd1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_27_at_Gramd1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:617 |
Association with transcript: | -409bp_to_uc009ozp.1_5end |
EntrezGene: | Gramd1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.09e-14 | 3 |
reticular formation | 1.09e-14 | 3 |
segmental subdivision of hindbrain | 2.32e-13 | 6 |
segmental subdivision of nervous system | 2.32e-13 | 6 |
hindbrain | 2.32e-13 | 6 |
presumptive hindbrain | 2.32e-13 | 6 |
regional part of nervous system | 1.27e-12 | 54 |
central nervous system | 3.75e-12 | 73 |
ectoderm-derived structure | 6.38e-12 | 95 |
ectoderm | 6.38e-12 | 95 |
presumptive ectoderm | 6.38e-12 | 95 |
nervous system | 9.13e-12 | 75 |
medulla oblongata | 1.60e-10 | 2 |
brainstem | 1.60e-10 | 2 |
myelencephalon | 1.60e-10 | 2 |
future myelencephalon | 1.60e-10 | 2 |
neurectoderm | 1.90e-10 | 64 |
neural plate | 1.90e-10 | 64 |
presumptive neural plate | 1.90e-10 | 64 |
brain | 2.04e-10 | 47 |
future brain | 2.04e-10 | 47 |
posterior neural tube | 5.44e-10 | 12 |
chordal neural plate | 5.44e-10 | 12 |
neural tube | 3.44e-09 | 52 |
neural rod | 3.44e-09 | 52 |
future spinal cord | 3.44e-09 | 52 |
neural keel | 3.44e-09 | 52 |
ecto-epithelium | 6.65e-09 | 73 |
regional part of brain | 1.05e-08 | 46 |
adult organism | 9.34e-08 | 51 |