FFCP PHASE1:Mm9::chr4:140517287..140517317,+: Difference between revisions
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{{FFCP|EntrezGene=67680|HGNC=|MCL_coexpression_id=79|UniProt=|association_with_transcript=0bp_to_ENSMUST00000125780,ENSMUST00000129181_5end|description=CAGE_peak_1_at_Sdhb_5end|id=chr4:140517287..140517317,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.39e-08!15;UBERON:0007100!4.83e-08!18;UBERON:0000948!4.83e-08!18;UBERON:0005498!4.83e-08!18;UBERON:0004140!4.83e-08!18;UBERON:0009881!4.83e-08!18;UBERON:0004141!4.83e-08!18;UBERON:0003084!4.83e-08!18;UBERON:0007005!4.83e-08!18;UBERON:0004139!4.83e-08!18;UBERON:0004291!4.83e-08!18;UBERON:0001242!4.30e-07!13;UBERON:0000060!4.30e-07!13;UBERON:0001262!4.30e-07!13;UBERON:0004786!4.30e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.89e-08,31;UBERON:0000344,4.39e-08,15;UBERON:0007100,4.83e-08,18;UBERON:0000948,4.83e-08,18;UBERON:0005498,4.83e-08,18;UBERON:0004140,4.83e-08,18;UBERON:0009881,4.83e-08,18;UBERON:0004141,4.83e-08,18;UBERON:0003084,4.83e-08,18;UBERON:0007005,4.83e-08,18;UBERON:0004139,4.83e-08,18;UBERON:0004291,4.83e-08,18;UBERON:0001242,4.30e-07,13;UBERON:0001262,4.30e-07,13;UBERON:0004786,4.30e-07,13|phase1_expression=84.5585912713312,238.699178825323,217.489636428198,227.150622691429,241.932637564086,121.208834320384,107.461814673942,54.231795845462,30.9735188733667,30.4283884218592,57.0155834190932,53.0484857318987,49.9906131399121,56.4735799626723,46.6353666541928,47.5816878366091,54.5658264939954,54.1017613589378,53.4746291062381,59.8389409035223,107.834891911556,75.2625410102711,81.7555340004868,219.189619226967,222.756411916222,355.449585787198,307.994827253738,228.614977879728,261.662248591427,297.395553116718,201.109573164361,77.473742162075,55.3558308826113,47.5445043046316,200.463024107385,217.268681483549,172.931444754227,111.747945406754,130.483002535475,148.680743288559,89.4111861807142,99.0415953189746,104.384725901698,29.0821649523584,30.1089485721958,33.0384153891027,89.9750046000245,139.754125239866,128.955789265135,86.3268751889818,99.3903593540074,176.815654168915,54.5293469687643,55.1275227928622,44.7004752859477,70.2318260378135,71.9198934246279,96.9463533481591,113.701851003094,101.56626802023,124.230955087211,127.405544057994,107.604670329448,168.281247131622,168.107281636386,159.147545747926,100.366037023666,102.202069215534,85.5439301544941,99.2293646737926,105.583130598394,174.532751470724,152.399293256613,106.32201371858,81.2769594234644,92.8410974476121,110.115880999389,117.727725714543,119.505882873357,106.827893061457,90.1153289483735,97.9317136646709,176.722838367874,139.565127287857,113.376299850393,92.218747253258,107.490619003323,101.960496866439,115.861075799772,114.339770441566,33.0445517119913,339.867431407648,269.268648148269,386.967188404315,262.509672648858,301.07406812941,226.11551641212,36.1312283865482,67.0247891875401,55.1209736236131,89.4355715581921,53.8971205140135,30.5766287647975,56.8853362522665,93.7406207578557,99.0637074007635,102.115937892986,186.348091701506,29.7778566194247,78.6743337043571,88.8244873042616,87.0771267972724,110.926054180164,107.615965354573,72.1994661813227,200.186879988173,27.1914464507811,282.547143421507,74.3072863637894,107.251421515132,135.375850816221,107.642306196019,59.6453635897991,58.848940199321,59.4828647350212,178.564481590805,83.3913266561205,86.3859932630507,101.020830523086,74.2961571447921,56.7300747495097,77.1517721972988,65.3579443922959,67.7645961925376,73.7647558186438,73.657533432762,56.011650117674,72.7780778069044,42.710146175291,67.1309520277852,59.8554037628437,86.4431912669858,53.6585146819941,56.2128970527217,47.6255494059295,49.0675548690975,63.248664077817,63.1236224603198,59.9279020353301,45.9527774807801,51.3777282558731,55.675716036604,35.5900479008765,36.5664774848275,32.3077954160471,51.3508408391712,73.0301714805764,74.3735451561527,73.5983463434585,123.86121197623,119.139238470397,196.807833176889,134.234265076814,207.586264493511,248.678585974454,320.664309810812,390.606072437846,398.636878841517,364.006388008619,361.00425350993,438.987603690809,603.805948066622,521.211973700954,592.923958083322,59.3017654950839,55.8772045219514,224.023934863015,152.059075831538,60.5738631520064,52.7177245123195,60.3099718987397,87.127282637284,104.740058650934,122.124851964263,196.455031479428,140.982305243753,137.480359213747,136.285183348188,116.978452271472,151.900480062563,195.172659036849,205.912076545016,80.2295221031535,66.9496283893011,61.9892546201942,86.7554656621039,94.2609087634661,98.4005553061169,112.181616858432,224.957865520914,229.53214010409,254.691746334596,205.441670571394,51.5551376662731,54.0537236561308,54.8663554219043,48.2807088904637,62.2237072161235,78.6793882004587,65.307023201334,85.7695349639937,142.771934857802,58.9449646762154,109.781579562209,135.112312458605,205.094048893055,216.173883293904,261.966832100308,40.2761954563198,87.545032237964,52.6376873907744,58.9015447639903,52.1012351200475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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67680 | |||
|HGNC= | |||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000125780,ENSMUST00000129181_5end | |||
|cluster_id=chr4:140517287..140517317,+ | |||
|description=CAGE_peak_1_at_Sdhb_5end | |||
|id=chr4:140517287..140517317,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.39e-08!15;UBERON:0007100!4.83e-08!18;UBERON:0000948!4.83e-08!18;UBERON:0005498!4.83e-08!18;UBERON:0004140!4.83e-08!18;UBERON:0009881!4.83e-08!18;UBERON:0004141!4.83e-08!18;UBERON:0003084!4.83e-08!18;UBERON:0007005!4.83e-08!18;UBERON:0004139!4.83e-08!18;UBERON:0004291!4.83e-08!18;UBERON:0001242!4.30e-07!13;UBERON:0000060!4.30e-07!13;UBERON:0001262!4.30e-07!13;UBERON:0004786!4.30e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.89e-08,31;UBERON:0000344,4.39e-08,15;UBERON:0007100,4.83e-08,18;UBERON:0000948,4.83e-08,18;UBERON:0005498,4.83e-08,18;UBERON:0004140,4.83e-08,18;UBERON:0009881,4.83e-08,18;UBERON:0004141,4.83e-08,18;UBERON:0003084,4.83e-08,18;UBERON:0007005,4.83e-08,18;UBERON:0004139,4.83e-08,18;UBERON:0004291,4.83e-08,18;UBERON:0001242,4.30e-07,13;UBERON:0001262,4.30e-07,13;UBERON:0004786,4.30e-07,13 | |||
|phase1_expression=84.5585912713312,238.699178825323,217.489636428198,227.150622691429,241.932637564086,121.208834320384,107.461814673942,54.231795845462,30.9735188733667,30.4283884218592,57.0155834190932,53.0484857318987,49.9906131399121,56.4735799626723,46.6353666541928,47.5816878366091,54.5658264939954,54.1017613589378,53.4746291062381,59.8389409035223,107.834891911556,75.2625410102711,81.7555340004868,219.189619226967,222.756411916222,355.449585787198,307.994827253738,228.614977879728,261.662248591427,297.395553116718,201.109573164361,77.473742162075,55.3558308826113,47.5445043046316,200.463024107385,217.268681483549,172.931444754227,111.747945406754,130.483002535475,148.680743288559,89.4111861807142,99.0415953189746,104.384725901698,29.0821649523584,30.1089485721958,33.0384153891027,89.9750046000245,139.754125239866,128.955789265135,86.3268751889818,99.3903593540074,176.815654168915,54.5293469687643,55.1275227928622,44.7004752859477,70.2318260378135,71.9198934246279,96.9463533481591,113.701851003094,101.56626802023,124.230955087211,127.405544057994,107.604670329448,168.281247131622,168.107281636386,159.147545747926,100.366037023666,102.202069215534,85.5439301544941,99.2293646737926,105.583130598394,174.532751470724,152.399293256613,106.32201371858,81.2769594234644,92.8410974476121,110.115880999389,117.727725714543,119.505882873357,106.827893061457,90.1153289483735,97.9317136646709,176.722838367874,139.565127287857,113.376299850393,92.218747253258,107.490619003323,101.960496866439,115.861075799772,114.339770441566,33.0445517119913,339.867431407648,269.268648148269,386.967188404315,262.509672648858,301.07406812941,226.11551641212,36.1312283865482,67.0247891875401,55.1209736236131,89.4355715581921,53.8971205140135,30.5766287647975,56.8853362522665,93.7406207578557,99.0637074007635,102.115937892986,186.348091701506,29.7778566194247,78.6743337043571,88.8244873042616,87.0771267972724,110.926054180164,107.615965354573,72.1994661813227,200.186879988173,27.1914464507811,282.547143421507,74.3072863637894,107.251421515132,135.375850816221,107.642306196019,59.6453635897991,58.848940199321,59.4828647350212,178.564481590805,83.3913266561205,86.3859932630507,101.020830523086,74.2961571447921,56.7300747495097,77.1517721972988,65.3579443922959,67.7645961925376,73.7647558186438,73.657533432762,56.011650117674,72.7780778069044,42.710146175291,67.1309520277852,59.8554037628437,86.4431912669858,53.6585146819941,56.2128970527217,47.6255494059295,49.0675548690975,63.248664077817,63.1236224603198,59.9279020353301,45.9527774807801,51.3777282558731,55.675716036604,35.5900479008765,36.5664774848275,32.3077954160471,51.3508408391712,73.0301714805764,74.3735451561527,73.5983463434585,123.86121197623,119.139238470397,196.807833176889,134.234265076814,207.586264493511,248.678585974454,320.664309810812,390.606072437846,398.636878841517,364.006388008619,361.00425350993,438.987603690809,603.805948066622,521.211973700954,592.923958083322,59.3017654950839,55.8772045219514,224.023934863015,152.059075831538,60.5738631520064,52.7177245123195,60.3099718987397,87.127282637284,104.740058650934,122.124851964263,196.455031479428,140.982305243753,137.480359213747,136.285183348188,116.978452271472,151.900480062563,195.172659036849,205.912076545016,80.2295221031535,66.9496283893011,61.9892546201942,86.7554656621039,94.2609087634661,98.4005553061169,112.181616858432,224.957865520914,229.53214010409,254.691746334596,205.441670571394,51.5551376662731,54.0537236561308,54.8663554219043,48.2807088904637,62.2237072161235,78.6793882004587,65.307023201334,85.7695349639937,142.771934857802,58.9449646762154,109.781579562209,135.112312458605,205.094048893055,216.173883293904,261.966832100308,40.2761954563198,87.545032237964,52.6376873907744,58.9015447639903,52.1012351200475,45.3941957667321,40.2293753097363,46.2466745422983,37.3595291531673,48.5007670330817,47.9958853659036,54.7303471150565,69.2466777282241,51.7843629721811,205.07614615741,279.023615798998,92.9434476005978,60.9820209333459,91.3532857030536,93.7693492737625,42.1312809618056,367.345199082363,78.5615466346479,73.7929226720647,59.4568577742525,64.5215754471891,65.0572128320591,73.3168214743076,68.817819284732,66.3420797458678,63.6413322493903,66.8348338157359,50.1048500785188,67.8429949972242,58.3135314485802,37.9431282836832,90.2666940711747,64.82242985338,76.487859912082,92.2278840006342,91.2482849001588,81.7777493530847,74.6857767256159,56.7112617984909,71.655973055329,79.6412629998256,102.256050317749,111.386386708042,36.4270378156553,59.2400999363011,71.4059934480805,64.5154475445093,42.0296353732188,59.3968162614895,51.3392944278617,85.2501857520878,55.8518665191631,30.9274823461177,60.2042526690046,52.1040559295077,43.5953952078945,55.5482038588315,55.0306505854459,45.7953110288721,174.88850197791,73.0575689921408,44.5972998882396,54.0733594063643,39.2612398023789,45.2084296811258,35.6771934351876,45.069300121685,69.6911562974807,64.5176195212063,56.2473893384005,93.5577205654811,51.8791029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| |||
|short_description=p1@Sdhb | |||
}} |
Latest revision as of 15:10, 26 September 2015
Short description: | p1@Sdhb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sdhb_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 0bp_to_ENSMUST00000125780, ENSMUST00000129181_5end |
EntrezGene: | Sdhb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.89e-08 | 31 |
mucosa | 4.39e-08 | 15 |
primary circulatory organ | 4.83e-08 | 18 |
heart | 4.83e-08 | 18 |
primitive heart tube | 4.83e-08 | 18 |
primary heart field | 4.83e-08 | 18 |
anterior lateral plate mesoderm | 4.83e-08 | 18 |
heart tube | 4.83e-08 | 18 |
heart primordium | 4.83e-08 | 18 |
cardiac mesoderm | 4.83e-08 | 18 |
cardiogenic plate | 4.83e-08 | 18 |
heart rudiment | 4.83e-08 | 18 |
intestinal mucosa | 4.30e-07 | 13 |
wall of intestine | 4.30e-07 | 13 |
gastrointestinal system mucosa | 4.30e-07 | 13 |