FFCP PHASE1:Mm9::chr9:40153700..40153716,-: Difference between revisions
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{{FFCP|EntrezGene=235283|HGNC=|MCL_coexpression_id=1|UniProt=Q80TI0|association_with_transcript=158bp_to_ENSMUST00000121357,uc009ozo.1_5end|description=CAGE_peak_17_at_Gramd1b_5end|id=chr9:40153700..40153716,-|ontology_enrichment_celltype=CL:0000117!7.00e-14!23;CL:0000337!7.00e-14!23;CL:0000221!3.31e-09!44;CL:0000133!3.31e-09!44;CL:0002319!7.14e-09!43;CL:0000540!6.19e-08!33;CL:0000047!6.19e-08!33;CL:0000031!6.19e-08!33;CL:0000404!6.19e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.45e-09,23;CL:0000337,4.45e-09,23;CL:0002610,5.18e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.58e-27!52;UBERON:0005068!4.58e-27!52;UBERON:0006241!4.58e-27!52;UBERON:0007135!4.58e-27!52;UBERON:0000033!1.54e-26!63;UBERON:0001017!1.77e-26!73;UBERON:0005743!1.77e-26!73;UBERON:0000073!5.51e-26!75;UBERON:0001016!5.51e-26!75;UBERON:0000955!8.50e-26!50;UBERON:0006238!8.50e-26!50;UBERON:0002616!8.66e-25!49;UBERON:0002020!3.35e-24!34;UBERON:0002346!7.75e-21!71;UBERON:0003075!7.75e-21!71;UBERON:0007284!7.75e-21!71;UBERON:0002791!2.09e-20!29;UBERON:0003528!2.09e-20!29;UBERON:0001893!2.09e-20!29;UBERON:0003056!3.77e-20!49;UBERON:0004121!6.91e-20!102;UBERON:0000924!6.91e-20!102;UBERON:0006601!6.91e-20!102;UBERON:0003080!1.09e-19!40;UBERON:0002780!7.94e-19!39;UBERON:0001890!7.94e-19!39;UBERON:0006240!7.94e-19!39;UBERON:0007811!1.64e-18!86;UBERON:0000153!2.67e-17!94;UBERON:0000956!1.47e-16!21;UBERON:0001869!1.47e-16!21;UBERON:0000203!1.47e-16!21;UBERON:0002619!4.15e-14!17;UBERON:0002021!1.37e-10!10;UBERON:0000411!1.37e-10!10;UBERON:0001950!1.37e-10!10;UBERON:0003076!7.22e-08!12;UBERON:0003057!7.22e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.32e-40,54;UBERON:0001049,7.87e-37,52;UBERON:0005068,7.87e-37,52;UBERON:0006241,7.87e-37,52;UBERON:0007135,7.87e-37,52;UBERON:0001017,1.29e-36,73;UBERON:0001016,1.95e-35,75;UBERON:0000955,4.29e-31,47;UBERON:0006238,4.29e-31,47;UBERON:0002020,3.91e-29,34;UBERON:0002616,4.31e-29,46;UBERON:0002346,1.33e-28,64;UBERON:0003075,1.33e-28,64;UBERON:0007284,1.33e-28,64;UBERON:0004121,2.27e-26,95;UBERON:0000924,2.27e-26,95;UBERON:0006601,2.27e-26,95;UBERON:0003080,2.43e-24,40;UBERON:0010371,3.32e-24,73;UBERON:0002021,5.64e-24,10;UBERON:0000411,5.64e-24,10;UBERON:0001950,5.64e-24,10;UBERON:0003528,3.20e-23,29;UBERON:0002791,3.20e-23,29;UBERON:0001893,3.20e-23,29;UBERON:0002780,1.31e-22,39;UBERON:0001890,1.31e-22,39;UBERON:0006240,1.31e-22,39;UBERON:0002619,3.29e-19,17;UBERON:0003056,7.29e-19,49;UBERON:0000956,7.53e-18,21;UBERON:0001869,7.53e-18,21;UBERON:0000203,7.53e-18,21;UBERON:0010314,9.60e-18,92;UBERON:0000025,4.13e-14,114;UBERON:0003076,7.34e-13,12;UBERON:0003057,7.34e-13,12;UBERON:0004111,1.04e-12,122;UBERON:0011216,6.49e-09,194;UBERON:0002240,6.66e-09,6;UBERON:0005174,6.66e-09,6;UBERON:0001137,6.66e-09,6;UBERON:0002950,9.20e-09,4;UBERON:0001891,9.20e-09,4;UBERON:0009616,9.20e-09,4;UBERON:0010286,9.20e-09,4;UBERON:0001948,3.75e-07,5;UBERON:0002315,3.75e-07,5;UBERON:0004684,5.18e-07,3;UBERON:0002275,5.18e-07,3;UBERON:0000483,9.21e-07,174|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.422366166455,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,1.15265491596466,0.518448061542388,0.405017814995072,0.841299845405528,1.14260393761521,1.54607978666129,0.857435594504678,0.191690942036473,0.919218786610021,1.10115880999389,2.29837208553338,2.30409799884365,0.527545150920775,0.731901148819277,0,1.11673199600552,1.68828783009504,1.5279824777681,2.35702868378934,2.98980529678116,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,2.04946557908083,1.46612694769419,0,0,0,0,4.34392854273986,5.03250663100489,1.7591609295801,9.03886464999838,6.13717097592793,4.1557608911912,3.0825839982874,0.101839363850316,0.622034853050465,2.27450482590307,0.841767423545896,0,0,0,0.150704817835715,0.272145996605311,0.512454881139399,0.562210347358373,0.517406741478031,0.215567992932842,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4585567081041,2.6755199218614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.571242563048644,0,0.407302655690628,0,0.350679099451593,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,13.8168166061377,0,0.178065603667255,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0,0,0.214337035031592,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=235283 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80TI0 | |||
|association_with_transcript=158bp_to_ENSMUST00000121357,uc009ozo.1_5end | |||
|cluster_id=chr9:40153700..40153716,- | |||
|description=CAGE_peak_17_at_Gramd1b_5end | |||
|id=chr9:40153700..40153716,- | |||
|ontology_enrichment_celltype=CL:0000117!7.00e-14!23;CL:0000337!7.00e-14!23;CL:0000221!3.31e-09!44;CL:0000133!3.31e-09!44;CL:0002319!7.14e-09!43;CL:0000540!6.19e-08!33;CL:0000047!6.19e-08!33;CL:0000031!6.19e-08!33;CL:0000404!6.19e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.45e-09,23;CL:0000337,4.45e-09,23;CL:0002610,5.18e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.58e-27!52;UBERON:0005068!4.58e-27!52;UBERON:0006241!4.58e-27!52;UBERON:0007135!4.58e-27!52;UBERON:0000033!1.54e-26!63;UBERON:0001017!1.77e-26!73;UBERON:0005743!1.77e-26!73;UBERON:0000073!5.51e-26!75;UBERON:0001016!5.51e-26!75;UBERON:0000955!8.50e-26!50;UBERON:0006238!8.50e-26!50;UBERON:0002616!8.66e-25!49;UBERON:0002020!3.35e-24!34;UBERON:0002346!7.75e-21!71;UBERON:0003075!7.75e-21!71;UBERON:0007284!7.75e-21!71;UBERON:0002791!2.09e-20!29;UBERON:0003528!2.09e-20!29;UBERON:0001893!2.09e-20!29;UBERON:0003056!3.77e-20!49;UBERON:0004121!6.91e-20!102;UBERON:0000924!6.91e-20!102;UBERON:0006601!6.91e-20!102;UBERON:0003080!1.09e-19!40;UBERON:0002780!7.94e-19!39;UBERON:0001890!7.94e-19!39;UBERON:0006240!7.94e-19!39;UBERON:0007811!1.64e-18!86;UBERON:0000153!2.67e-17!94;UBERON:0000956!1.47e-16!21;UBERON:0001869!1.47e-16!21;UBERON:0000203!1.47e-16!21;UBERON:0002619!4.15e-14!17;UBERON:0002021!1.37e-10!10;UBERON:0000411!1.37e-10!10;UBERON:0001950!1.37e-10!10;UBERON:0003076!7.22e-08!12;UBERON:0003057!7.22e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.32e-40,54;UBERON:0001049,7.87e-37,52;UBERON:0005068,7.87e-37,52;UBERON:0006241,7.87e-37,52;UBERON:0007135,7.87e-37,52;UBERON:0001017,1.29e-36,73;UBERON:0001016,1.95e-35,75;UBERON:0000955,4.29e-31,47;UBERON:0006238,4.29e-31,47;UBERON:0002020,3.91e-29,34;UBERON:0002616,4.31e-29,46;UBERON:0002346,1.33e-28,64;UBERON:0003075,1.33e-28,64;UBERON:0007284,1.33e-28,64;UBERON:0004121,2.27e-26,95;UBERON:0000924,2.27e-26,95;UBERON:0006601,2.27e-26,95;UBERON:0003080,2.43e-24,40;UBERON:0010371,3.32e-24,73;UBERON:0002021,5.64e-24,10;UBERON:0000411,5.64e-24,10;UBERON:0001950,5.64e-24,10;UBERON:0003528,3.20e-23,29;UBERON:0002791,3.20e-23,29;UBERON:0001893,3.20e-23,29;UBERON:0002780,1.31e-22,39;UBERON:0001890,1.31e-22,39;UBERON:0006240,1.31e-22,39;UBERON:0002619,3.29e-19,17;UBERON:0003056,7.29e-19,49;UBERON:0000956,7.53e-18,21;UBERON:0001869,7.53e-18,21;UBERON:0000203,7.53e-18,21;UBERON:0010314,9.60e-18,92;UBERON:0000025,4.13e-14,114;UBERON:0003076,7.34e-13,12;UBERON:0003057,7.34e-13,12;UBERON:0004111,1.04e-12,122;UBERON:0011216,6.49e-09,194;UBERON:0002240,6.66e-09,6;UBERON:0005174,6.66e-09,6;UBERON:0001137,6.66e-09,6;UBERON:0002950,9.20e-09,4;UBERON:0001891,9.20e-09,4;UBERON:0009616,9.20e-09,4;UBERON:0010286,9.20e-09,4;UBERON:0001948,3.75e-07,5;UBERON:0002315,3.75e-07,5;UBERON:0004684,5.18e-07,3;UBERON:0002275,5.18e-07,3;UBERON:0000483,9.21e-07,174 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.422366166455,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,1.15265491596466,0.518448061542388,0.405017814995072,0.841299845405528,1.14260393761521,1.54607978666129,0.857435594504678,0.191690942036473,0.919218786610021,1.10115880999389,2.29837208553338,2.30409799884365,0.527545150920775,0.731901148819277,0,1.11673199600552,1.68828783009504,1.5279824777681,2.35702868378934,2.98980529678116,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,2.04946557908083,1.46612694769419,0,0,0,0,4.34392854273986,5.03250663100489,1.7591609295801,9.03886464999838,6.13717097592793,4.1557608911912,3.0825839982874,0.101839363850316,0.622034853050465,2.27450482590307,0.841767423545896,0,0,0,0.150704817835715,0.272145996605311,0.512454881139399,0.562210347358373,0.517406741478031,0.215567992932842,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4585567081041,2.6755199218614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.571242563048644,0,0.407302655690628,0,0.350679099451593,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,13.8168166061377,0,0.178065603667255,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0,0,0.214337035031592,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.549454872801795,0,0,4.51801474093653,4.60325236507177,5.72895513439397,6.70227411140382,4.7955776383945,5.2877572817279,3.37511250115903,5.85417564191487,14.9536994964788,9.83744592328458,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0.64183841918363,0,0.760437899670719,0.565879024158229,0.655490552289177,0.320125762024346,0.34461281373368,0.476293691283074,0.115884325944855,0.192909220463705,0.824171801606613,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.338458431566706,0.365855945745545,0,0.271608227691724,1.12228454331548,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p17@Gramd1b | |||
}} |
Latest revision as of 15:09, 26 September 2015
Short description: | p17@Gramd1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_Gramd1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 158bp_to_ENSMUST00000121357, uc009ozo.1_5end |
EntrezGene: | Gramd1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.45e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.45e-09 | 23 |
raphe nuclei neuron | 5.18e-07 | 3 |