FFCP PHASE1:Mm9::chr4:140401685..140401700,-: Difference between revisions
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|id=chr4:140401685..140401700,-
|short_description=p1@Padi1
|description=CAGE_peak_1_at_Padi1_5end
|association_with_transcript=0bp_to_ENSMUST00000026378,NM_011059,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18599 | |EntrezGene=18599 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=197 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z185,Q544I4 | |UniProt=Q9Z185,Q544I4 | ||
|association_with_transcript=0bp_to_ENSMUST00000026378,NM_011059,uc008vnh.1_5end | |||
|cluster_id=chr4:140401685..140401700,- | |||
|description=CAGE_peak_1_at_Padi1_5end | |||
|id=chr4:140401685..140401700,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.90e-08,3;CL:0002202,2.90e-08,3;CL:0000069,2.90e-08,3;CL:0002632,2.90e-08,3;CL:0002368,2.90e-08,3;CL:0000307,2.90e-08,3;CL:0000377,2.90e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000474!1.38e-09!9;UBERON:0003134!1.29e-08!8;UBERON:0003100!2.83e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000474,1.37e-20,9;UBERON:0003134,2.77e-18,8;UBERON:0003100,1.59e-16,11;UBERON:0000014,5.53e-13,5;UBERON:0001003,5.53e-13,5;UBERON:0002097,5.53e-13,5;UBERON:0002199,5.53e-13,5;UBERON:0007029,5.53e-13,5;UBERON:0007376,5.53e-13,5;UBERON:0002416,5.53e-13,5;UBERON:0007383,5.53e-13,5;UBERON:0003975,1.96e-12,5;UBERON:0005795,5.52e-10,4;UBERON:0000995,5.52e-10,4;UBERON:0003126,2.90e-08,3;UBERON:0001005,2.90e-08,3;UBERON:0007196,2.90e-08,3;UBERON:0001558,2.90e-08,3;UBERON:0003102,1.25e-07,22;UBERON:0000992,1.90e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.6534199966259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287536413054709,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,23.5975234702223,25.8427062784601,26.7927955857835,0.68510327831436,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0.696504333044333,1.64625709126355,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0.380451252225118,0,0.494096864172033,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.975668239288994,0.788175720530955,0.8858587585951,0.956728611944923,1.14704320301017,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0.963963949265421,49.8209699081023,2.13678724400706,1.30309567482861,36.7883374228754,0,0.485561272309963,0,0.943025398779491,18.6040192514887,19.6758494684114,10.3371317267288,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,3.75474732901937,1.27099242518292,0.220528398054962,61.832344853055,6.13564821444441,21.1095237248546,71.742778745885,132.461706094264,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.540026704109006,6.48173717644853,7.86105229486239,6.06889558731693,4.1326727862668,4.97336289769656,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0.39736270956253,0.120195449519969,0,0.504832249740738,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,36.503591762049,0,0,0,2.12508553435409,39.225637369297,1197.44531945938,322.410042134915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0.206035057238894,0,0.252697211763798,0.25347929989024,0.565879024158229,0.561849044819294,0.640251524048693,0.516919220600519,1.90517476513229,0.579421629724277,0.192909220463705,0.412085900803307,1.03039244094078,1.02860775715625,0.887379030796687,0.715308569841963,0.436039249896986,0.470546902076653,0.507687647350059,0.365855945745545,0.526139422875686,0.679020569229309,0,0.355905054372522,0.492522411877817,0.818462086339379,0,0.771626443924566,2.24829520144151,3.27504251823572,2.57845264857958,1.14772999241306,8.82365676478062,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.6534199966259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287536413054709,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,23.5975234702223,25.8427062784601,26.7927955857835,0.68510327831436,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0.696504333044333,1.64625709126355,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0.380451252225118,0,0.494096864172033,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.975668239288994,0.788175720530955,0.8858587585951,0.956728611944923,1.14704320301017,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0.963963949265421,49.8209699081023,2.13678724400706,1.30309567482861,36.7883374228754,0,0.485561272309963,0,0.943025398779491,18.6040192514887,19.6758494684114,10.3371317267288,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,3.75474732901937,1.27099242518292,0.220528398054962,61.832344853055,6.13564821444441,21.1095237248546,71.742778745885,132.461706094264,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.540026704109006,6.48173717644853,7.86105229486239,6.06889558731693,4.1326727862668,4.97336289769656,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0.39736270956253,0.120195449519969,0,0.504832249740738,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,36.503591762049,0,0,0,2.12508553435409,39.225637369297,1197.44531945938,322.410042134915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0.206035057238894,0,0.252697211763798,0.25347929989024,0.565879024158229,0.561849044819294,0.640251524048693,0.516919220600519,1.90517476513229,0.579421629724277,0.192909220463705,0.412085900803307,1.03039244094078,1.02860775715625,0.887379030796687,0.715308569841963,0.436039249896986,0.470546902076653,0.507687647350059,0.365855945745545,0.526139422875686,0.679020569229309,0,0.355905054372522,0.492522411877817,0.818462086339379,0,0.771626443924566,2.24829520144151,3.27504251823572,2.57845264857958,1.14772999241306,8.82365676478062,0.695603506861264 | ||
|short_description=p1@Padi1 | |||
}} | }} |
Latest revision as of 15:06, 26 September 2015
Short description: | p1@Padi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Padi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:197 |
Association with transcript: | 0bp_to_ENSMUST00000026378, NM_011059, uc008vnh.1_5end |
EntrezGene: | Padi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.90e-08 | 3 |
epithelial cell of tracheobronchial tree | 2.90e-08 | 3 |
branched duct epithelial cell | 2.90e-08 | 3 |
epithelial cell of lower respiratory tract | 2.90e-08 | 3 |
respiratory epithelial cell | 2.90e-08 | 3 |
tracheal epithelial cell | 2.90e-08 | 3 |
tracheoblast | 2.90e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive system | 1.37e-20 | 9 |
female reproductive organ | 2.77e-18 | 8 |
female organism | 1.59e-16 | 11 |
zone of skin | 5.53e-13 | 5 |
skin epidermis | 5.53e-13 | 5 |
skin of body | 5.53e-13 | 5 |
integument | 5.53e-13 | 5 |
surface | 5.53e-13 | 5 |
outer epithelium | 5.53e-13 | 5 |
integumental system | 5.53e-13 | 5 |
enveloping layer of ectoderm | 5.53e-13 | 5 |
internal female genitalia | 1.96e-12 | 5 |
embryonic uterus | 5.52e-10 | 4 |
uterus | 5.52e-10 | 4 |
trachea | 2.90e-08 | 3 |
respiratory airway | 2.90e-08 | 3 |
tracheobronchial tree | 2.90e-08 | 3 |
lower respiratory tract | 2.90e-08 | 3 |
surface structure | 1.25e-07 | 22 |
female gonad | 1.90e-07 | 3 |