FFCP PHASE1:Mm9::chr4:140204738..140204751,-: Difference between revisions
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{{FFCP|EntrezGene=72754|HGNC=|UniProt=A2AWP8|association_with_transcript=-67bp_to_ENSMUST00000097820,NM_001112723,NM_172415,uc008vmw.2,uc008vmx.2_5end|description=CAGE_peak_10_at_Arhgef10l_5end|id=chr4:140204738..140204751,-|ontology_enrichment_celltype=CL:0000540!6.06e-10!33;CL:0000047!6.06e-10!33;CL:0000031!6.06e-10!33;CL:0000404!6.06e-10!33;CL:0000393!1.12e-09!39;CL:0000211!1.12e-09!39;CL:0002319!1.27e-07!43;CL:0000055!2.76e-07!50;CL:0000221!3.36e-07!44;CL:0000133!3.36e-07!44|ontology_enrichment_celltype_v019_2=CL:0002609,3.15e-24,6;CL:0000540,3.13e-19,33;CL:0000047,3.13e-19,33;CL:0000031,3.13e-19,33;CL:0000404,3.13e-19,33;CL:0000393,4.32e-19,39;CL:0000211,4.32e-19,39;CL:0000117,9.31e-19,23;CL:0000337,9.31e-19,23;CL:0002613,1.34e-16,3;CL:0002319,1.97e-14,43;CL:0000221,4.52e-14,44;CL:0000133,4.52e-14,44;CL:0002321,6.22e-10,70;CL:0002608,1.10e-08,3;CL:0000723,2.99e-07,91;CL:0000048,2.99e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.01e-10!73;UBERON:0005743!1.01e-10!73;UBERON:0000073!1.16e-10!75;UBERON:0001016!1.16e-10!75;UBERON:0004121!1.98e-09!102;UBERON:0000924!1.98e-09!102;UBERON:0006601!1.98e-09!102;UBERON:0003056!6.73e-09!49;UBERON:0002346!7.03e-09!71;UBERON:0003075!7.03e-09!71;UBERON:0007284!7.03e-09!71;UBERON:0001049!2.31e-08!52;UBERON:0005068!2.31e-08!52;UBERON:0006241!2.31e-08!52;UBERON:0007135!2.31e-08!52;UBERON:0000033!1.22e-07!63;UBERON:0002616!1.39e-07!49;UBERON:0003080!1.46e-07!40;UBERON:0002780!2.56e-07!39;UBERON:0001890!2.56e-07!39;UBERON:0006240!2.56e-07!39;UBERON:0000955!3.40e-07!50;UBERON:0006238!3.40e-07!50;UBERON:0000153!4.23e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.68e-18,34;UBERON:0003528,4.57e-18,29;UBERON:0002791,4.57e-18,29;UBERON:0001893,4.57e-18,29;UBERON:0000369,2.58e-17,5;UBERON:0002435,2.58e-17,5;UBERON:0000204,2.58e-17,5;UBERON:0010082,2.58e-17,5;UBERON:0002780,7.14e-16,39;UBERON:0001890,7.14e-16,39;UBERON:0006240,7.14e-16,39;UBERON:0003080,1.93e-15,40;UBERON:0001049,7.22e-14,52;UBERON:0005068,7.22e-14,52;UBERON:0006241,7.22e-14,52;UBERON:0007135,7.22e-14,52;UBERON:0000073,2.70e-13,54;UBERON:0002616,3.06e-13,46;UBERON:0001017,3.13e-13,73;UBERON:0000955,6.27e-13,47;UBERON:0006238,6.27e-13,47;UBERON:0001016,7.88e-13,75;UBERON:0003056,2.42e-12,49;UBERON:0002346,5.75e-11,64;UBERON:0003075,5.75e-11,64;UBERON:0007284,5.75e-11,64;UBERON:0002420,6.31e-11,8;UBERON:0007245,6.31e-11,8;UBERON:0010009,6.31e-11,8;UBERON:0010011,6.31e-11,8;UBERON:0000454,6.31e-11,8;UBERON:0004121,9.76e-10,95;UBERON:0000924,9.76e-10,95;UBERON:0006601,9.76e-10,95;UBERON:0000956,1.46e-09,21;UBERON:0001869,1.46e-09,21;UBERON:0000203,1.46e-09,21;UBERON:0010371,2.06e-09,73;UBERON:0010314,1.80e-08,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0.436050312760893,0,0.194429899074283,0.139986421625363,0,0,0,0,1.02903774414379,0.286533439938757,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,2.28117147078651,2.56511282830212,2.52389953621658,0,0,1.5923803897944,3.1629005436018,0.919218786610021,0,0.255374676170375,0.153606533256243,1.18697658957174,1.18933936683133,1.04182674111352,0.279182999001381,0,0,0.294628585473668,0.427115042397309,1.3047961207771,0,0.377857800533928,0,0,0,0,0,0,0,0.340860645156116,0.779358013808606,0.70667914902068,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.299581278809645,0,1.13088916901578,0,0.255715457330331,0.41557608911912,0,0.305518091550949,0.248813941220186,0,0,0.520481771850815,0.229902104433473,0.360124259610698,0.150704817835715,0.340182495756639,0.640568601424249,0.937017245597288,0,1.94011193639558,0.567318240503458,0.703804496655795,0.657587197282725,0.556094498451196,0,0.61734640922383,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,0.823236899034275,0,0,0.639864751605702,0.696710015581316,0.128867461322093,0.201683524623343,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.456994050438915,0,0.203651327845314,0.193952487167626,0.210407459670956,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.651859905768103,0,0.469380496577004,0.335012514883631,0,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.631016438832513,0.390438744296638,0.646270193198397,1.19484398976276,0.668396022247182,0.849229592366497,2.42886421004937,0.292255857911312,0.395287777946524,0,0,0.712262414669021,0,0,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.646793418913773,1.07168517515796,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0.322928853391811,0.2412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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72754 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=A2AWP8 | |||
|association_with_transcript=-67bp_to_ENSMUST00000097820,NM_001112723,NM_172415,uc008vmw.2,uc008vmx.2_5end | |||
|cluster_id=chr4:140204738..140204751,- | |||
|description=CAGE_peak_10_at_Arhgef10l_5end | |||
|id=chr4:140204738..140204751,- | |||
|ontology_enrichment_celltype=CL:0000540!6.06e-10!33;CL:0000047!6.06e-10!33;CL:0000031!6.06e-10!33;CL:0000404!6.06e-10!33;CL:0000393!1.12e-09!39;CL:0000211!1.12e-09!39;CL:0002319!1.27e-07!43;CL:0000055!2.76e-07!50;CL:0000221!3.36e-07!44;CL:0000133!3.36e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,3.15e-24,6;CL:0000540,3.13e-19,33;CL:0000047,3.13e-19,33;CL:0000031,3.13e-19,33;CL:0000404,3.13e-19,33;CL:0000393,4.32e-19,39;CL:0000211,4.32e-19,39;CL:0000117,9.31e-19,23;CL:0000337,9.31e-19,23;CL:0002613,1.34e-16,3;CL:0002319,1.97e-14,43;CL:0000221,4.52e-14,44;CL:0000133,4.52e-14,44;CL:0002321,6.22e-10,70;CL:0002608,1.10e-08,3;CL:0000723,2.99e-07,91;CL:0000048,2.99e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.01e-10!73;UBERON:0005743!1.01e-10!73;UBERON:0000073!1.16e-10!75;UBERON:0001016!1.16e-10!75;UBERON:0004121!1.98e-09!102;UBERON:0000924!1.98e-09!102;UBERON:0006601!1.98e-09!102;UBERON:0003056!6.73e-09!49;UBERON:0002346!7.03e-09!71;UBERON:0003075!7.03e-09!71;UBERON:0007284!7.03e-09!71;UBERON:0001049!2.31e-08!52;UBERON:0005068!2.31e-08!52;UBERON:0006241!2.31e-08!52;UBERON:0007135!2.31e-08!52;UBERON:0000033!1.22e-07!63;UBERON:0002616!1.39e-07!49;UBERON:0003080!1.46e-07!40;UBERON:0002780!2.56e-07!39;UBERON:0001890!2.56e-07!39;UBERON:0006240!2.56e-07!39;UBERON:0000955!3.40e-07!50;UBERON:0006238!3.40e-07!50;UBERON:0000153!4.23e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.68e-18,34;UBERON:0003528,4.57e-18,29;UBERON:0002791,4.57e-18,29;UBERON:0001893,4.57e-18,29;UBERON:0000369,2.58e-17,5;UBERON:0002435,2.58e-17,5;UBERON:0000204,2.58e-17,5;UBERON:0010082,2.58e-17,5;UBERON:0002780,7.14e-16,39;UBERON:0001890,7.14e-16,39;UBERON:0006240,7.14e-16,39;UBERON:0003080,1.93e-15,40;UBERON:0001049,7.22e-14,52;UBERON:0005068,7.22e-14,52;UBERON:0006241,7.22e-14,52;UBERON:0007135,7.22e-14,52;UBERON:0000073,2.70e-13,54;UBERON:0002616,3.06e-13,46;UBERON:0001017,3.13e-13,73;UBERON:0000955,6.27e-13,47;UBERON:0006238,6.27e-13,47;UBERON:0001016,7.88e-13,75;UBERON:0003056,2.42e-12,49;UBERON:0002346,5.75e-11,64;UBERON:0003075,5.75e-11,64;UBERON:0007284,5.75e-11,64;UBERON:0002420,6.31e-11,8;UBERON:0007245,6.31e-11,8;UBERON:0010009,6.31e-11,8;UBERON:0010011,6.31e-11,8;UBERON:0000454,6.31e-11,8;UBERON:0004121,9.76e-10,95;UBERON:0000924,9.76e-10,95;UBERON:0006601,9.76e-10,95;UBERON:0000956,1.46e-09,21;UBERON:0001869,1.46e-09,21;UBERON:0000203,1.46e-09,21;UBERON:0010371,2.06e-09,73;UBERON:0010314,1.80e-08,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0.436050312760893,0,0.194429899074283,0.139986421625363,0,0,0,0,1.02903774414379,0.286533439938757,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,2.28117147078651,2.56511282830212,2.52389953621658,0,0,1.5923803897944,3.1629005436018,0.919218786610021,0,0.255374676170375,0.153606533256243,1.18697658957174,1.18933936683133,1.04182674111352,0.279182999001381,0,0,0.294628585473668,0.427115042397309,1.3047961207771,0,0.377857800533928,0,0,0,0,0,0,0,0.340860645156116,0.779358013808606,0.70667914902068,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.299581278809645,0,1.13088916901578,0,0.255715457330331,0.41557608911912,0,0.305518091550949,0.248813941220186,0,0,0.520481771850815,0.229902104433473,0.360124259610698,0.150704817835715,0.340182495756639,0.640568601424249,0.937017245597288,0,1.94011193639558,0.567318240503458,0.703804496655795,0.657587197282725,0.556094498451196,0,0.61734640922383,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,0.823236899034275,0,0,0.639864751605702,0.696710015581316,0.128867461322093,0.201683524623343,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.456994050438915,0,0.203651327845314,0.193952487167626,0.210407459670956,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.651859905768103,0,0.469380496577004,0.335012514883631,0,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.631016438832513,0.390438744296638,0.646270193198397,1.19484398976276,0.668396022247182,0.849229592366497,2.42886421004937,0.292255857911312,0.395287777946524,0,0,0.712262414669021,0,0,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.646793418913773,1.07168517515796,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0.322928853391811,0.241251699712623,0.119372344003136,0.656563598980245,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.247960367176008,0.26175594198403,0,0,0,0.598066184175915,0.165458490457098,0,0.129159823477731,0.168956125490778,0.58678619322877,0.13020438484395,0,0.483168241652012,0,0,0.405450430580328,0.205421914329655,0.25984164595559,0.358053391334963,0,0.120195449519969,0,0.100966449948148,0.15241361331,0.403304740547362,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.343706364687375,1.37016503954128,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0.726511433089237,0.399024873401031,0.512200817262403,0,0,0.367687016900028,0.44449345560323,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.448176066834085,0.17230640686684,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0.685738504770831,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.592302255241736,0,0,0.407412341537585,0,0.474540072496697,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0.701794825336225,0,0,0.220591419119515,0 | |||
|short_description=p10@Arhgef10l | |||
}} |
Latest revision as of 14:58, 26 September 2015
Short description: | p10@Arhgef10l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Arhgef10l_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_ENSMUST00000097820, NM_001112723, NM_172415, uc008vmw.2, uc008vmx.2_5end |
EntrezGene: | Arhgef10l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 3.15e-24 | 6 |
neuron | 3.13e-19 | 33 |
neuronal stem cell | 3.13e-19 | 33 |
neuroblast | 3.13e-19 | 33 |
electrically signaling cell | 3.13e-19 | 33 |
electrically responsive cell | 4.32e-19 | 39 |
electrically active cell | 4.32e-19 | 39 |
CNS neuron (sensu Vertebrata) | 9.31e-19 | 23 |
neuroblast (sensu Vertebrata) | 9.31e-19 | 23 |
striatum neuron | 1.34e-16 | 3 |
neural cell | 1.97e-14 | 43 |
ectodermal cell | 4.52e-14 | 44 |
neurectodermal cell | 4.52e-14 | 44 |
embryonic cell | 6.22e-10 | 70 |
hippocampal neuron | 1.10e-08 | 3 |
somatic stem cell | 2.99e-07 | 91 |
multi fate stem cell | 2.99e-07 | 91 |