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FFCP PHASE1:Mm9::chr6:122552363..122552418,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11810
|EntrezGene=11810
|HGNC=
|HGNC=
|MCL_coexpression_id=67
|TSSclassifier=NA
|UniProt=P51908,D3Z675
|UniProt=P51908,D3Z675
|association_with_transcript=0bp_to_ENSMUST00000112585,ENSMUST00000143356,ENSMUST00000147760_5end
|association_with_transcript=0bp_to_ENSMUST00000112585,ENSMUST00000143356,ENSMUST00000147760_5end
|cluster_id=chr6:122552363..122552418,-
|description=CAGE_peak_1_at_Apobec1_5end
|description=CAGE_peak_1_at_Apobec1_5end
|id=chr6:122552363..122552418,-
|id=chr6:122552363..122552418,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!6.98e-16!70;UBERON:0000926!2.68e-14!193;UBERON:0004120!2.68e-14!193;UBERON:0006603!2.68e-14!193;UBERON:0003104!8.29e-12!131;UBERON:0009142!8.29e-12!131;UBERON:0002204!1.97e-11!32;UBERON:0004119!1.15e-10!130;UBERON:0000925!1.15e-10!130;UBERON:0006595!1.15e-10!130;UBERON:0001007!1.89e-10!128;UBERON:0001555!1.89e-10!128;UBERON:0007026!1.89e-10!128;UBERON:0005256!2.67e-10!47;UBERON:0004921!5.41e-10!126;UBERON:0004185!5.41e-10!126;UBERON:0000077!1.08e-09!97;UBERON:0002365!3.30e-09!25;UBERON:0002330!3.30e-09!25;UBERON:0001474!4.41e-09!22;UBERON:0004765!4.41e-09!22;UBERON:0001434!4.41e-09!22;UBERON:0001041!7.41e-09!92;UBERON:0009569!1.01e-08!66;UBERON:0002371!1.05e-08!16;UBERON:0002193!1.19e-08!48;UBERON:0002100!3.24e-08!98;UBERON:0002107!4.85e-08!22;UBERON:0007499!4.85e-08!22;UBERON:0006925!4.85e-08!22;UBERON:0009497!4.85e-08!22;UBERON:0000015!4.85e-08!22;UBERON:0002423!4.85e-08!22;UBERON:0006235!4.85e-08!22;UBERON:0008835!4.85e-08!22;UBERON:0003894!4.85e-08!22;UBERON:0004161!4.85e-08!22;UBERON:0008836!4.85e-08!22;UBERON:0005057!6.85e-08!51;UBERON:0009854!7.33e-08!23;UBERON:0009856!7.33e-08!23;UBERON:0000490!8.01e-08!66;UBERON:0002390!1.06e-07!45;UBERON:0003061!1.06e-07!45;UBERON:0003081!1.61e-07!88;UBERON:0000466!4.25e-07!79;UBERON:0005911!4.27e-07!69;UBERON:0005172!7.44e-07!49;UBERON:0005173!7.44e-07!49;UBERON:0002417!7.44e-07!49;UBERON:0000916!7.44e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.96e-11,32;UBERON:0002100,6.04e-11,90;UBERON:0004119,6.46e-11,118;UBERON:0000925,6.46e-11,118;UBERON:0006595,6.46e-11,118;UBERON:0005256,6.80e-11,45;UBERON:0001007,1.04e-10,116;UBERON:0001555,1.04e-10,116;UBERON:0007026,1.04e-10,116;UBERON:0004921,3.01e-10,114;UBERON:0001041,2.23e-09,80;UBERON:0002365,3.29e-09,25;UBERON:0002330,3.29e-09,25;UBERON:0001474,4.39e-09,22;UBERON:0004765,4.39e-09,22;UBERON:0001434,4.39e-09,22;UBERON:0009569,1.01e-08,66;UBERON:0002371,1.05e-08,16;UBERON:0002193,1.20e-08,48;UBERON:0002405,1.20e-08,48;UBERON:0003104,1.69e-08,61;UBERON:0009142,1.69e-08,61;UBERON:0005177,2.18e-08,79;UBERON:0002107,4.83e-08,22;UBERON:0007499,4.83e-08,22;UBERON:0006925,4.83e-08,22;UBERON:0009497,4.83e-08,22;UBERON:0000015,4.83e-08,22;UBERON:0002423,4.83e-08,22;UBERON:0006235,4.83e-08,22;UBERON:0008835,4.83e-08,22;UBERON:0003894,4.83e-08,22;UBERON:0004161,4.83e-08,22;UBERON:0008836,4.83e-08,22;UBERON:0009854,7.31e-08,23;UBERON:0009856,7.31e-08,23;UBERON:0000490,8.06e-08,66;UBERON:0002390,1.07e-07,45;UBERON:0003061,1.07e-07,45;UBERON:0005911,4.30e-07,69;UBERON:0003081,4.51e-07,87;UBERON:0005172,7.42e-07,49;UBERON:0005173,7.42e-07,49;UBERON:0002417,7.42e-07,49;UBERON:0000916,7.42e-07,49
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63750542163,11.5172614472973,10.3691978633434,26.7175904627378,1.12738587736838,2.0932316446157,2.15096037594227,3.30567020184881,1.93739735216597,3.8859908862879,5.04636126176742,4.29674469985035,3.56521771047417,2.41584120826006,2.88030006257865,32.5491454247024,8.5144590421869,9.96296284498824,13.2519239437351,12.1738153053887,13.7090134799073,11.418567704397,10.485956429395,10.9043765943999,14.250672844485,14.3173182894314,20.076323432389,19.1461564864256,22.4403652188612,14.964205318604,0,0,0,27.2397327585389,30.2168785476403,32.0515342467714,24.0092584568554,22.069172577556,1.12950368523413,0.920650473014354,4.58316410751517,2.40594455281163,0.685082519770642,3.0215755895588,1.35004500046361,0.45032120322422,2.71885445390523,1.03552062350364,1.14166082342594,1.19707462020309,2.39027048055788,3.64660075602441,3.77303692730368,4.59608771125035,4.88942801163553,5.35691148821125,5.77654577265267,6.31743029409494,4.05566879824384,5.47016390019621,3.93294331373506,3.90553429669703,3.84817642002609,5.71552429539688,5.44656331940821,4.82273051159263,2.47251540481984,4.56316652416632,5.82877729055206,4.2594193478241,3.81497903915713,4.0696996657052,4.79957840118186,5.58456412085065,5.85369513192872,3.41990624869196,3.12349461845482,2.80571135828869,4.38949567059444,4.92522411877817,4.91077251803627,4.33823155320705,8.29498427218908,2.24829520144151,5.84829021113521,8.59484216193193,8.03410994689142,11.0295709559758,19.9406338633562
|phase1_expression=4.16387002472464,13.2610654902957,25.479957405814,4.83942738090928,8.5152274090879,15.9485308316295,17.7545606852599,5.4231795845462,1.267098499365,0.70219357896598,1.54096171402954,0.239316476986009,7.87523357683546,3.05971408466491,21.9852442798337,29.7638643063044,18.1886088313318,70.1903317922079,69.1056745372923,88.2730475739903,8.50432901510698,9.13476751048145,11.2315909329742,17.2791816616879,13.9939661450974,15.5042630311055,12.0613358924541,15.513928753384,3.6104449696711,3.52842181663903,12.1951780860418,3.81018404075779,1.84519436275371,0,6.35473563452804,4.65457007003779,3.67504841272264,87.4731108240137,77.3521991078562,82.1932278038863,155.293112840188,118.166868897811,96.1310499001684,10.4494358919729,9.63080846585388,13.5824596599644,3.12956537739216,11.3373081317832,5.4921545683618,10.1103547518627,6.29938897314131,5.75010257459886,39.0933472114526,2.90144856804538,4.36921938885203,7.20326420900652,22.349608315223,16.5015069528782,0.202316460859598,0,0,1.69422266034566,10.6715375533337,188.528990770453,248.205457004311,166.252346897387,59.9200221036809,34.1954291736184,2.59224030771194,2.97013064329719,2.94454945891935,1.42825492201902,1.98781686856452,1.22490799214954,0.670918297127655,0,0,1.91531007127782,0.921639199537461,0.263772575460388,0.182975287204819,0,0.837548997004143,1.68828783009504,1.37518422999129,1.47314292736834,2.42031857358475,0.559198337475902,5.90664307998836,5.2144376473682,27.8269909153611,55.9275520037901,169.31286209323,32.9218946899068,56.5305483179472,65.8599524033083,19.5217743983135,10.5666799998396,5.71529210126311,5.65343319216544,5.63373679106722,14.115912515575,7.64415719119937,0,30.0922547005588,24.5759069510846,28.3093689208279,22.1516726654976,249.616119835874,47.0561580835495,3.99016251562112,3.95805121805784,4.84292544237723,7.988299949289,7.99603208522793,11.6869929936598,3.21353458054686,34.7038456607788,79.6149496754887,10.0295446967394,35.5554844721234,38.7900202508178,7.45567044872489,2.92780797011547,2.72280718857492,14.5610521468897,5.51149572727233,11.3981518888747,9.65733725755292,3.14560342750128,3.66000482254901,1.25654352112864,2.9550134432687,1.02286182932132,3.94797284663164,2.59586020908412,6.11036183101898,43.0448118310922,25.2722758433675,40.404836330203,1.56144531555244,2.29902104433473,1.44049703844279,2.41127708537144,2.65342346690179,2.43416068541215,2.62364828767241,10.0894314588216,0.862271971731369,1.32374256117473,4.04687585577082,3.72632745126877,4.44875598760957,2.089512999133,5.14455341019859,1.79130840136644,15.4486901208912,13.6394390770799,13.0715209721973,1.03562886267751,3.04883877975425,3.6012412292203,5.44512891845984,9.05115466038058,5.55361606394562,2.79040733700489,2.68273401399619,4.08678698285093,5.75959474697182,7.71587081171748,10.6200140505071,11.6959989940266,18.8813099150304,21.7414398391802,3.78521907415429,3.39585220851639,33.3722970813636,10.3135720998782,3.19932375802851,2.78684006232526,4.38149368495117,4.23535401709019,4.44756087689741,3.80451252225118,9.96511029243474,5.43506550589236,9.80207314321051,13.5290400987983,15.4021628824105,12.5834717211591,15.1296634912286,13.3424653080426,2.27601481143698,1.71372768914593,2.25415471346161,2.24016460629846,3.68509725618489,3.22624771495465,6.45012678667424,7.38050739898011,9.73392112616524,12.4631135561019,31.4239784712378,2.66952169145751,6.09332884850929,8.31989815823959,11.5630269191447,14.470629585145,16.2960545140109,19.8510334841059,29.6707464998315,32.9473695825698,35.9420516318386,45.7733365632259,47.7417639865278,50.5157755894223,55.254403364749,40.5252557945228,31.9623018988226,1.89491411770485,4.23708938749267,4.92260748748046,5.63256595892405,5.86271901046355,8.09348379012447,10.1469496886055,16.5516901311501,18.6030339304971,13.0752910299139,26.3819936692338,34.3643113913132,28.9298117163023,826.336235987212,706.533483280504,33.4399705652945,26.4899276452543,5.29816946959713,5.74337264301796,10.8197063948606,16.1581393410799,1.57754109708128,3.12350995437311,2.58508077279359,3.82350076724083,2.89638276307112,1.69845918473299,3.23848561339915,4.38383786866968,4.74345333535828,3.53453448063988,57.3437944241405,4.27357448801413,6.02681749608232,99.806924398384,9.2921596837974,4.37005145078967,3.02323556964751,3.96070667487386,5.02013217897314,4.91896236710284,9.30341855405596,18.1766864738753,8.91243445961803,9.7971394960103,6.32511651449993,12.3762651897824,52.0872596803296,2.34079422240703,3.23396709456886,1.92903331528433,4.78818630834139,3.74574516964348,3.62007845324666,3.95804433848979,14.7843176080138,6.14313005505079,8.82113592219848,23.5787341706316,9.36493674836252,5.72972786817481,8.23669173621642,13.459553779095,11.659233465194,6.30446026835733,46.8186213386116,18.9875918526165,24.6308721401717,18.6484772434644,38.000995306445,35.2318386738045,12.7483822495391,11.056164733569,14.0963973280512,9.54670618015114,2.37251995185852,5.48962561242491,4.21220829205025,5.01811910434725,5.45906409365444,5.52943820177765,10.1663750542163,11.5172614472973,10.3691978633434,26.7175904627378,1.12738587736838,2.0932316446157,2.15096037594227,3.30567020184881,1.93739735216597,3.8859908862879,5.04636126176742,4.29674469985035,3.56521771047417,2.41584120826006,2.88030006257865,32.5491454247024,8.5144590421869,9.96296284498824,13.2519239437351,12.1738153053887,13.7090134799073,11.418567704397,10.485956429395,10.9043765943999,14.250672844485,14.3173182894314,20.076323432389,19.1461564864256,22.4403652188612,14.964205318604,0,0,0,27.2397327585389,30.2168785476403,32.0515342467714,24.0092584568554,22.069172577556,1.12950368523413,0.920650473014354,4.58316410751517,2.40594455281163,0.685082519770642,3.0215755895588,1.35004500046361,0.45032120322422,2.71885445390523,1.03552062350364,1.14166082342594,1.19707462020309,2.39027048055788,3.64660075602441,3.77303692730368,4.59608771125035,4.88942801163553,5.35691148821125,5.77654577265267,6.31743029409494,4.05566879824384,5.47016390019621,3.93294331373506,3.90553429669703,3.84817642002609,5.71552429539688,5.44656331940821,4.82273051159263,2.47251540481984,4.56316652416632,5.82877729055206,4.2594193478241,3.81497903915713,4.0696996657052,4.79957840118186,5.58456412085065,5.85369513192872,3.41990624869196,3.12349461845482,2.80571135828869,4.38949567059444,4.92522411877817,4.91077251803627,4.33823155320705,8.29498427218908,2.24829520144151,5.84829021113521,8.59484216193193,8.03410994689142,11.0295709559758,19.9406338633562
|short_description=p1@Apobec1
|short_description=p1@Apobec1
}}
}}

Latest revision as of 14:50, 26 September 2015

Short description:p1@Apobec1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Apobec1_5end
Coexpression cluster:MCL_coexpression_mm9:67
Association with transcript: 0bp_to_ENSMUST00000112585, ENSMUST00000143356, ENSMUST00000147760_5end
EntrezGene:Apobec1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Apobec1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I625.48
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.95
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A121.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A329.76
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A518.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A270.19
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A469.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A688.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I911.23
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D117.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.99
GP2+ M cell, pool1.CNhs13228.11845-124H915.50
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I215.51
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G887.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H177.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H382.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9155.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2118.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H496.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.63
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.34
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.49
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A239.09
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.20
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.35
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C516.50
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7188.53
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7248.21
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2166.25
Mouse Microglia, donor1.CNhs12629.11718-123C859.92
Mouse Microglia, donor2.CNhs12634.11736-123E834.20
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D95.91
Mouse Schwann, donor2.CNhs12573.11746-123F95.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G327.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F755.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C4169.31
Mouse hepatocyte, donor3.CNhs12615.11637-122C832.92
Mouse hepatocyte, donor6.CNhs13090.11822-124F456.53
Mouse hepatocyte, donor8.CNhs13091.11824-124F665.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G130.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G224.58
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G328.31
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B622.15
accessory axillary lymph node, adult.CNhs10475.1063-29H9249.62
adrenal gland, adult.CNhs10508.49-24D747.06
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F57.99
adrenal gland, neonate N00.CNhs11191.1311-23C18.00
adrenal gland, neonate N25.CNhs11223.1377-27I311.69
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H134.70
bone (os femoris), adult.CNhs10483.56-12G279.61
bone (os femoris), neonate N02.CNhs11227.1985-43F510.03
bone (os femoris), neonate N16.CNhs11225.1525-43A635.56
bone (os femoris), neonate N20.CNhs11195.1350-25C338.79
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H714.56
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.51
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.66
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.11
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A243.04
epididymis, adult.CNhs10490.58-23B225.27
eyeball, adult.CNhs10484.31-12G440.40
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A210.09
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C815.45
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.64
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.07
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C89.05
heart, embryo E16.CNhs11021.457-17C65.55
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E34.09
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G17.72
heart, neonate N16.CNhs11209.782-15G110.62
heart, neonate N20.CNhs11127.821-26I611.70
heart, neonate N25.CNhs11196.1351-25D318.88
heart, neonate N30.CNhs11202.1390-42D221.74
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I333.37
intestine, adult.CNhs10496.178-9A310.31
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E95.44
intestine, neonate N06.CNhs11102.688-20B89.80
intestine, neonate N07.CNhs11095.720-20F213.53
intestine, neonate N10.CNhs11098.755-23A515.40
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E315.13
intestine, neonate N30.CNhs11131.1384-42G113.34
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G73.23
kidney, neonate N10.CNhs11206.758-6D56.45
kidney, neonate N20.CNhs11113.832-19I17.38
kidney, neonate N25.CNhs11122.1353-25F39.73
kidney, neonate N30.CNhs11203.1385-42H112.46
liver, adult pregnant day01.CNhs10466.508-5B231.42
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H66.09
liver, embryo E14.CNhs10594.409-16E18.32
liver, embryo E15.CNhs10520.433-16D711.56
liver, embryo E16.CNhs10523.462-17F514.47
liver, embryo E17.CNhs10510.481-18A316.30
liver, embryo E18.CNhs10579.499-43G419.85
liver, neonate N00.CNhs11117.641-24F429.67
liver, neonate N03.CNhs11123.1345-25G232.95
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H245.77
liver, neonate N10.CNhs11115.751-24B947.74
liver, neonate N20.CNhs11220.823-25A350.52
liver, neonate N25.CNhs11198.1368-26H155.25
liver, neonate N30.CNhs11106.1382-42D140.53
lung, adult.CNhs10474.28-22B131.96
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A65.86
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C610.15
lung, neonate N06.CNhs11212.683-20E516.55
lung, neonate N07.CNhs11111.715-19A318.60
lung, neonate N10.CNhs11219.750-23E613.08
lung, neonate N20.CNhs11109.822-18A426.38
lung, neonate N25.CNhs11119.1359-25C734.36
lung, neonate N30.CNhs11133.1394-42H228.93
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1826.34
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1706.53
mammary gland, adult lactating day02.CNhs10480.595-22B633.44
mammary gland, adult pregnant day19.CNhs10476.588-5H226.49
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.16
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I757.34
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I46.03
oviduct, adult pregnant day01.CNhs10500.988-6G699.81
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G99.30
pancreas, neonate N01.CNhs11138.1531-43D718.18
pancreas, neonate N02.CNhs11139.1539-43D88.91
pancreas, neonate N16.CNhs11136.787-43B69.80
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G852.09
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I714.78
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C323.58
skin, neonate N00.CNhs11124.650-25G49.36
skin, neonate N03.CNhs11215.662-22H35.73
skin, neonate N06.CNhs11097.693-20I58.24
skin, neonate N10.CNhs11108.762-6C413.46
small intestine, neonate N16.CNhs11114.790-21I111.66
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G246.82
spleen, embryo E16.CNhs11035.461-43C118.99
spleen, embryo E18.CNhs11011.1271-21F224.63
spleen, neonate N10.CNhs11116.752-24D118.65
spleen, neonate N20.CNhs11112.824-19H138.00
spleen, neonate N25.CNhs11099.1354-25G335.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.10
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G85.49
stomach, embryo E16.CNhs11022.459-17D44.21
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B85.53
stomach, neonate N07.CNhs11210.718-18A910.17
stomach, neonate N25.CNhs11104.1355-25E411.52
stomach, neonate N30.CNhs11134.1386-42I110.37
submandibular gland, adult.CNhs10469.59-29C126.72
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B75.05
testis, neonate N07.CNhs11222.726-26I44.30
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B532.55
thymus, embryo E14.CNhs11041.402-44I48.51
thymus, embryo E15.CNhs11005.430-45I29.96
thymus, embryo E16.CNhs11002.456-26C513.25
thymus, embryo E17.CNhs10581.478-18C112.17
thymus, embryo E18.CNhs10595.1273-19G413.71
thymus, neonate N02.CNhs11181.1541-43F811.42
thymus, neonate N03.CNhs11137.2104-43C710.49
thymus, neonate N06.CNhs11197.681-26C410.90
thymus, neonate N07.CNhs11211.713-19D314.25
thymus, neonate N10.CNhs11194.748-24E414.32
thymus, neonate N20.CNhs11186.820-7A220.08
thymus, neonate N25.CNhs11125.1362-25G719.15
thymus, neonate N30.CNhs11132.1393-42G222.44
tongue, adult.CNhs10499.32-1B414.96
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E427.24
uterus, adult pregnant day19.CNhs10497.590-15F530.22
uterus, adult.CNhs10509.92-27E532.05
vagina, adult.CNhs10502.89-27D524.01
vesicular gland, adult.CNhs10491.51-27F822.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F98.29
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C28.59
whole body, neonate N01.CNhs10576.659-23C68.03
whole body, neonate N06.CNhs10515.692-21D111.03
whole body, neonate N10.CNhs10518.761-6B419.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
musculoskeletal system1.96e-1132
trunk6.04e-1190
endoderm-derived structure6.46e-11118
endoderm6.46e-11118
presumptive endoderm6.46e-11118
trunk mesenchyme6.80e-1145
digestive system1.04e-10116
digestive tract1.04e-10116
primitive gut1.04e-10116
subdivision of digestive tract3.01e-10114
foregut2.23e-0980
exocrine gland3.29e-0925
exocrine system3.29e-0925
bone element4.39e-0922
skeletal element4.39e-0922
skeletal system4.39e-0922
subdivision of trunk1.01e-0866
bone marrow1.05e-0816
hemolymphoid system1.20e-0848
immune system1.20e-0848
mesenchyme1.69e-0861
entire embryonic mesenchyme1.69e-0861
trunk region element2.18e-0879
liver4.83e-0822
epithelial sac4.83e-0822
digestive gland4.83e-0822
epithelium of foregut-midgut junction4.83e-0822
anatomical boundary4.83e-0822
hepatobiliary system4.83e-0822
foregut-midgut junction4.83e-0822
hepatic diverticulum4.83e-0822
liver primordium4.83e-0822
septum transversum4.83e-0822
liver bud4.83e-0822
digestive tract diverticulum7.31e-0823
sac7.31e-0823
unilaminar epithelium8.06e-0866
hematopoietic system1.07e-0745
blood island1.07e-0745
endo-epithelium4.30e-0769
lateral plate mesoderm4.51e-0787
abdomen element7.42e-0749
abdominal segment element7.42e-0749
abdominal segment of trunk7.42e-0749
abdomen7.42e-0749
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