FFCP PHASE1:Mm9::chr2:32596958..32596967,+: Difference between revisions
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{{FFCP|EntrezGene=27387|HGNC=|MCL_coexpression_id=13|UniProt=A2AK86|association_with_transcript=-42bp_to_ENSMUST00000131101_5end|description=CAGE_peak_8_at_Sh2d3c_5end|id=chr2:32596958..32596967,+|ontology_enrichment_celltype=CL:0000117!4.04e-23!23;CL:0000337!4.04e-23!23;CL:0000540!3.16e-15!33;CL:0000047!3.16e-15!33;CL:0000031!3.16e-15!33;CL:0000404!3.16e-15!33;CL:0000393!1.19e-11!39;CL:0000211!1.19e-11!39;CL:0000221!2.74e-11!44;CL:0000133!2.74e-11!44;CL:0002319!7.84e-11!43;CL:0000055!3.04e-08!50;CL:0002609!1.68e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,9.33e-27,23;CL:0000337,9.33e-27,23;CL:0000540,2.39e-18,33;CL:0000047,2.39e-18,33;CL:0000031,2.39e-18,33;CL:0000404,2.39e-18,33;CL:0000393,2.30e-15,39;CL:0000211,2.30e-15,39;CL:0002319,7.78e-14,43;CL:0000221,1.70e-13,44;CL:0000133,1.70e-13,44;CL:0002613,6.72e-10,3;CL:0000120,2.17e-09,3;CL:0002608,2.39e-09,3;CL:0002612,3.51e-09,3;CL:0002321,4.69e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.38e-29!52;UBERON:0005068!6.38e-29!52;UBERON:0006241!6.38e-29!52;UBERON:0007135!6.38e-29!52;UBERON:0002346!4.57e-27!71;UBERON:0003075!4.57e-27!71;UBERON:0007284!4.57e-27!71;UBERON:0000033!7.89e-27!63;UBERON:0001017!1.21e-26!73;UBERON:0005743!1.21e-26!73;UBERON:0002616!9.21e-26!49;UBERON:0000073!1.69e-25!75;UBERON:0001016!1.69e-25!75;UBERON:0000955!5.56e-25!50;UBERON:0006238!5.56e-25!50;UBERON:0003056!1.31e-23!49;UBERON:0002020!1.30e-22!34;UBERON:0004121!6.79e-22!102;UBERON:0000924!6.79e-22!102;UBERON:0006601!6.79e-22!102;UBERON:0003080!1.84e-20!40;UBERON:0002780!1.70e-19!39;UBERON:0001890!1.70e-19!39;UBERON:0006240!1.70e-19!39;UBERON:0002791!3.10e-17!29;UBERON:0003528!3.10e-17!29;UBERON:0001893!3.10e-17!29;UBERON:0007811!1.09e-15!86;UBERON:0000153!6.05e-14!94;UBERON:0000956!1.78e-13!21;UBERON:0001869!1.78e-13!21;UBERON:0000203!1.78e-13!21;UBERON:0002619!4.59e-10!17;UBERON:0003076!6.51e-09!12;UBERON:0003057!6.51e-09!12;UBERON:0002240!9.16e-08!6;UBERON:0005174!9.16e-08!6;UBERON:0001137!9.16e-08!6;UBERON:0000025!9.18e-08!114;UBERON:0002021!4.21e-07!10;UBERON:0000411!4.21e-07!10;UBERON:0001950!4.21e-07!10;UBERON:0001948!5.90e-07!5;UBERON:0002315!5.90e-07!5;UBERON:0004111!6.14e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.19e-21,34;UBERON:0001017,1.24e-15,73;UBERON:0000073,1.36e-15,54;UBERON:0001016,3.51e-15,75;UBERON:0001049,1.79e-13,52;UBERON:0005068,1.79e-13,52;UBERON:0006241,1.79e-13,52;UBERON:0007135,1.79e-13,52;UBERON:0003528,3.37e-13,29;UBERON:0002791,3.37e-13,29;UBERON:0001893,3.37e-13,29;UBERON:0002619,8.06e-13,17;UBERON:0001948,6.56e-12,5;UBERON:0002315,6.56e-12,5;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0002346,1.03e-10,64;UBERON:0003075,1.03e-10,64;UBERON:0007284,1.03e-10,64;UBERON:0000956,2.53e-10,21;UBERON:0001869,2.53e-10,21;UBERON:0000203,2.53e-10,21;UBERON:0002240,5.10e-10,6;UBERON:0005174,5.10e-10,6;UBERON:0001137,5.10e-10,6;UBERON:0002780,1.28e-09,39;UBERON:0001890,1.28e-09,39;UBERON:0006240,1.28e-09,39;UBERON:0003080,2.33e-09,40;UBERON:0010371,3.11e-09,73;UBERON:0002257,3.51e-09,3;UBERON:0001954,1.15e-08,7;UBERON:0003022,1.15e-08,7;UBERON:0002421,1.15e-08,7;UBERON:0000349,1.15e-08,7;UBERON:0002600,1.15e-08,7;UBERON:0002616,4.93e-08,46;UBERON:0000955,7.60e-08,47;UBERON:0006238,7.60e-08,47;UBERON:0003056,1.72e-07,49;UBERON:0010314,4.76e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.841299845405528,0.571301968807607,1.98781686856452,1.22490799214954,0.766763768145891,1.83843757322004,2.20231761998777,0.638436690425939,0.921639199537461,2.2420668914133,2.37867873366265,0,0.558365998002762,0.56276261003168,0.30559649555362,1.17851434189467,1.28134512719193,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,0.748953197024114,0,0.502617408451458,0.521472960576829,0.511430914660661,0.83115217823824,0.162241263067758,0,0,0,0,0.130120442962704,0,0.360124259610698,0.150704817835715,0.340182495756639,0.512454881139399,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.23485534855141,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0.820481806145422,0,0,0,0,0.646270193198397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,1.12950368523413,0.920650473014354,1.14579102687879,0.515559547031063,0.685082519770642,0,0.675022500231806,0.45032120322422,0,1.55328093525546,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0.64183841918363,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.581385666529314,0.282328141245992,0.169229215783353,0,0,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0.749431733813838,0,0,0.191288332068843,0,0|short_description=p8@Sh2d3c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27387 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=A2AK86 | |||
|association_with_transcript=-42bp_to_ENSMUST00000131101_5end | |||
|cluster_id=chr2:32596958..32596967,+ | |||
|description=CAGE_peak_8_at_Sh2d3c_5end | |||
|id=chr2:32596958..32596967,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.04e-23!23;CL:0000337!4.04e-23!23;CL:0000540!3.16e-15!33;CL:0000047!3.16e-15!33;CL:0000031!3.16e-15!33;CL:0000404!3.16e-15!33;CL:0000393!1.19e-11!39;CL:0000211!1.19e-11!39;CL:0000221!2.74e-11!44;CL:0000133!2.74e-11!44;CL:0002319!7.84e-11!43;CL:0000055!3.04e-08!50;CL:0002609!1.68e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.33e-27,23;CL:0000337,9.33e-27,23;CL:0000540,2.39e-18,33;CL:0000047,2.39e-18,33;CL:0000031,2.39e-18,33;CL:0000404,2.39e-18,33;CL:0000393,2.30e-15,39;CL:0000211,2.30e-15,39;CL:0002319,7.78e-14,43;CL:0000221,1.70e-13,44;CL:0000133,1.70e-13,44;CL:0002613,6.72e-10,3;CL:0000120,2.17e-09,3;CL:0002608,2.39e-09,3;CL:0002612,3.51e-09,3;CL:0002321,4.69e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.38e-29!52;UBERON:0005068!6.38e-29!52;UBERON:0006241!6.38e-29!52;UBERON:0007135!6.38e-29!52;UBERON:0002346!4.57e-27!71;UBERON:0003075!4.57e-27!71;UBERON:0007284!4.57e-27!71;UBERON:0000033!7.89e-27!63;UBERON:0001017!1.21e-26!73;UBERON:0005743!1.21e-26!73;UBERON:0002616!9.21e-26!49;UBERON:0000073!1.69e-25!75;UBERON:0001016!1.69e-25!75;UBERON:0000955!5.56e-25!50;UBERON:0006238!5.56e-25!50;UBERON:0003056!1.31e-23!49;UBERON:0002020!1.30e-22!34;UBERON:0004121!6.79e-22!102;UBERON:0000924!6.79e-22!102;UBERON:0006601!6.79e-22!102;UBERON:0003080!1.84e-20!40;UBERON:0002780!1.70e-19!39;UBERON:0001890!1.70e-19!39;UBERON:0006240!1.70e-19!39;UBERON:0002791!3.10e-17!29;UBERON:0003528!3.10e-17!29;UBERON:0001893!3.10e-17!29;UBERON:0007811!1.09e-15!86;UBERON:0000153!6.05e-14!94;UBERON:0000956!1.78e-13!21;UBERON:0001869!1.78e-13!21;UBERON:0000203!1.78e-13!21;UBERON:0002619!4.59e-10!17;UBERON:0003076!6.51e-09!12;UBERON:0003057!6.51e-09!12;UBERON:0002240!9.16e-08!6;UBERON:0005174!9.16e-08!6;UBERON:0001137!9.16e-08!6;UBERON:0000025!9.18e-08!114;UBERON:0002021!4.21e-07!10;UBERON:0000411!4.21e-07!10;UBERON:0001950!4.21e-07!10;UBERON:0001948!5.90e-07!5;UBERON:0002315!5.90e-07!5;UBERON:0004111!6.14e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.19e-21,34;UBERON:0001017,1.24e-15,73;UBERON:0000073,1.36e-15,54;UBERON:0001016,3.51e-15,75;UBERON:0001049,1.79e-13,52;UBERON:0005068,1.79e-13,52;UBERON:0006241,1.79e-13,52;UBERON:0007135,1.79e-13,52;UBERON:0003528,3.37e-13,29;UBERON:0002791,3.37e-13,29;UBERON:0001893,3.37e-13,29;UBERON:0002619,8.06e-13,17;UBERON:0001948,6.56e-12,5;UBERON:0002315,6.56e-12,5;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0002346,1.03e-10,64;UBERON:0003075,1.03e-10,64;UBERON:0007284,1.03e-10,64;UBERON:0000956,2.53e-10,21;UBERON:0001869,2.53e-10,21;UBERON:0000203,2.53e-10,21;UBERON:0002240,5.10e-10,6;UBERON:0005174,5.10e-10,6;UBERON:0001137,5.10e-10,6;UBERON:0002780,1.28e-09,39;UBERON:0001890,1.28e-09,39;UBERON:0006240,1.28e-09,39;UBERON:0003080,2.33e-09,40;UBERON:0010371,3.11e-09,73;UBERON:0002257,3.51e-09,3;UBERON:0001954,1.15e-08,7;UBERON:0003022,1.15e-08,7;UBERON:0002421,1.15e-08,7;UBERON:0000349,1.15e-08,7;UBERON:0002600,1.15e-08,7;UBERON:0002616,4.93e-08,46;UBERON:0000955,7.60e-08,47;UBERON:0006238,7.60e-08,47;UBERON:0003056,1.72e-07,49;UBERON:0010314,4.76e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.841299845405528,0.571301968807607,1.98781686856452,1.22490799214954,0.766763768145891,1.83843757322004,2.20231761998777,0.638436690425939,0.921639199537461,2.2420668914133,2.37867873366265,0,0.558365998002762,0.56276261003168,0.30559649555362,1.17851434189467,1.28134512719193,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,0.748953197024114,0,0.502617408451458,0.521472960576829,0.511430914660661,0.83115217823824,0.162241263067758,0,0,0,0,0.130120442962704,0,0.360124259610698,0.150704817835715,0.340182495756639,0.512454881139399,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.23485534855141,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0.820481806145422,0,0,0,0,0.646270193198397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,1.12950368523413,0.920650473014354,1.14579102687879,0.515559547031063,0.685082519770642,0,0.675022500231806,0.45032120322422,0,1.55328093525546,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0.64183841918363,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.581385666529314,0.282328141245992,0.169229215783353,0,0,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0.749431733813838,0,0,0.191288332068843,0,0 | |||
|short_description=p8@Sh2d3c | |||
}} |
Latest revision as of 14:43, 26 September 2015
Short description: | p8@Sh2d3c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Sh2d3c_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -42bp_to_ENSMUST00000131101_5end |
EntrezGene: | Sh2d3c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.33e-27 | 23 |
neuroblast (sensu Vertebrata) | 9.33e-27 | 23 |
neuron | 2.39e-18 | 33 |
neuronal stem cell | 2.39e-18 | 33 |
neuroblast | 2.39e-18 | 33 |
electrically signaling cell | 2.39e-18 | 33 |
electrically responsive cell | 2.30e-15 | 39 |
electrically active cell | 2.30e-15 | 39 |
neural cell | 7.78e-14 | 43 |
ectodermal cell | 1.70e-13 | 44 |
neurectodermal cell | 1.70e-13 | 44 |
striatum neuron | 6.72e-10 | 3 |
granule cell | 2.17e-09 | 3 |
hippocampal neuron | 2.39e-09 | 3 |
neuron of the ventral spinal cord | 3.51e-09 | 3 |
embryonic cell | 4.69e-08 | 70 |