FFCP PHASE1:Mm9::chr7:30980582..30980588,-: Difference between revisions
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{{FFCP|EntrezGene=12336|HGNC=|MCL_coexpression_id=495|UniProt=O88456|association_with_transcript=-399bp_to_ENSMUST00000001845_5end|description=CAGE_peak_16_at_Capns1_5end|id=chr7:30980582..30980588,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,2.56e-25,3;CL:0002202,2.56e-25,3;CL:0000069,2.56e-25,3;CL:0002632,2.56e-25,3;CL:0002368,2.56e-25,3;CL:0000307,2.56e-25,3;CL:0000377,2.56e-25,3;CL:0000349,1.55e-11,3;CL:0000351,1.55e-11,3;CL:0000223,7.80e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.56e-25,3;UBERON:0001005,2.56e-25,3;UBERON:0007196,2.56e-25,3;UBERON:0001558,2.56e-25,3;UBERON:0005631,4.90e-24,3;UBERON:0000478,4.90e-24,3;UBERON:0000158,4.90e-24,3;UBERON:0001987,1.19e-16,2;UBERON:0003124,1.19e-16,2;UBERON:0004340,1.19e-16,2;UBERON:0003975,4.31e-15,5;UBERON:0000358,1.55e-11,3;UBERON:0000307,1.55e-11,3;UBERON:0007010,1.55e-11,3;UBERON:0000996,9.82e-10,1;UBERON:0003134,1.15e-09,8;UBERON:0000305,4.39e-09,1;UBERON:0001723,5.27e-09,1;UBERON:0001033,5.27e-09,1;UBERON:0010056,5.27e-09,1;UBERON:0005795,8.37e-09,4;UBERON:0000995,8.37e-09,4;UBERON:0004175,1.18e-08,9;UBERON:0000474,1.18e-08,9;UBERON:0000161,2.25e-07,5;UBERON:0003100,3.54e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0.869593466105033,0,2.719885334831,0,0,0,0,0,0,0,0,0,0,0,6.27824018932521,7.60079596425296,8.08839112023653,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,1.48316980640624,0,0,0,0.220841518460394,0,0,0,0,0.510914110417183,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0.504941854408746,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75474732901937,1.0591603543191,0,0.8244312647074,0,0.180938774784468,0.358117032009409,0.656563598980245,0,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0.418176592028937,0,0,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,1.13365191807606,0.221985953374065,1.61484941897056,3.52557694364565,0.386379188064381,0,0,9.21784030039983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0,0.382576664137687,0.220591419119515,0|short_description=p16@Capns1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12336 | |||
|HGNC= | |||
|MCL_coexpression_id=495 | |||
|TSSclassifier=NA | |||
|UniProt=O88456 | |||
|association_with_transcript=-399bp_to_ENSMUST00000001845_5end | |||
|cluster_id=chr7:30980582..30980588,- | |||
|description=CAGE_peak_16_at_Capns1_5end | |||
|id=chr7:30980582..30980588,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.56e-25,3;CL:0002202,2.56e-25,3;CL:0000069,2.56e-25,3;CL:0002632,2.56e-25,3;CL:0002368,2.56e-25,3;CL:0000307,2.56e-25,3;CL:0000377,2.56e-25,3;CL:0000349,1.55e-11,3;CL:0000351,1.55e-11,3;CL:0000223,7.80e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.56e-25,3;UBERON:0001005,2.56e-25,3;UBERON:0007196,2.56e-25,3;UBERON:0001558,2.56e-25,3;UBERON:0005631,4.90e-24,3;UBERON:0000478,4.90e-24,3;UBERON:0000158,4.90e-24,3;UBERON:0001987,1.19e-16,2;UBERON:0003124,1.19e-16,2;UBERON:0004340,1.19e-16,2;UBERON:0003975,4.31e-15,5;UBERON:0000358,1.55e-11,3;UBERON:0000307,1.55e-11,3;UBERON:0007010,1.55e-11,3;UBERON:0000996,9.82e-10,1;UBERON:0003134,1.15e-09,8;UBERON:0000305,4.39e-09,1;UBERON:0001723,5.27e-09,1;UBERON:0001033,5.27e-09,1;UBERON:0010056,5.27e-09,1;UBERON:0005795,8.37e-09,4;UBERON:0000995,8.37e-09,4;UBERON:0004175,1.18e-08,9;UBERON:0000474,1.18e-08,9;UBERON:0000161,2.25e-07,5;UBERON:0003100,3.54e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0.869593466105033,0,2.719885334831,0,0,0,0,0,0,0,0,0,0,0,6.27824018932521,7.60079596425296,8.08839112023653,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,1.48316980640624,0,0,0,0.220841518460394,0,0,0,0,0.510914110417183,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0.504941854408746,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75474732901937,1.0591603543191,0,0.8244312647074,0,0.180938774784468,0.358117032009409,0.656563598980245,0,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0.418176592028937,0,0,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,1.13365191807606,0.221985953374065,1.61484941897056,3.52557694364565,0.386379188064381,0,0,9.21784030039983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p16@Capns1 | |||
}} |
Latest revision as of 14:16, 26 September 2015
Short description: | p16@Capns1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Capns1_5end |
Coexpression cluster: | MCL_coexpression_mm9:495 |
Association with transcript: | -399bp_to_ENSMUST00000001845_5end |
EntrezGene: | Capns1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.56e-25 | 3 |
epithelial cell of tracheobronchial tree | 2.56e-25 | 3 |
branched duct epithelial cell | 2.56e-25 | 3 |
epithelial cell of lower respiratory tract | 2.56e-25 | 3 |
respiratory epithelial cell | 2.56e-25 | 3 |
tracheal epithelial cell | 2.56e-25 | 3 |
tracheoblast | 2.56e-25 | 3 |
extraembryonic cell | 1.55e-11 | 3 |
trophoblast cell | 1.55e-11 | 3 |
endodermal cell | 7.80e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.56e-25 | 3 |
respiratory airway | 2.56e-25 | 3 |
tracheobronchial tree | 2.56e-25 | 3 |
lower respiratory tract | 2.56e-25 | 3 |
extraembryonic membrane | 4.90e-24 | 3 |
extraembryonic structure | 4.90e-24 | 3 |
membranous layer | 4.90e-24 | 3 |
placenta | 1.19e-16 | 2 |
chorion | 1.19e-16 | 2 |
allantois | 1.19e-16 | 2 |
internal female genitalia | 4.31e-15 | 5 |
blastocyst | 1.55e-11 | 3 |
blastula | 1.55e-11 | 3 |
cleaving embryo | 1.55e-11 | 3 |
vagina | 9.82e-10 | 1 |
female reproductive organ | 1.15e-09 | 8 |
amnion | 4.39e-09 | 1 |
tongue | 5.27e-09 | 1 |
gustatory system | 5.27e-09 | 1 |
future tongue | 5.27e-09 | 1 |
embryonic uterus | 8.37e-09 | 4 |
uterus | 8.37e-09 | 4 |
internal genitalia | 1.18e-08 | 9 |
female reproductive system | 1.18e-08 | 9 |
orifice | 2.25e-07 | 5 |
female organism | 3.54e-07 | 11 |