FFCP PHASE1:Mm9::chr9:35366090..35366103,-: Difference between revisions
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{{FFCP|EntrezGene=30959|HGNC=|MCL_coexpression_id=60|UniProt=Q9QY15|association_with_transcript=-35bp_to_ENSMUST00000034612,NM_013932,uc012gqi.1_5end|description=CAGE_peak_4_at_Ddx25_5end|id=chr9:35366090..35366103,-|ontology_enrichment_celltype=CL:0000117!1.73e-13!23;CL:0000337!1.73e-13!23;CL:0000540!4.31e-13!33;CL:0000047!4.31e-13!33;CL:0000031!4.31e-13!33;CL:0000404!4.31e-13!33;CL:0000393!1.48e-09!39;CL:0000211!1.48e-09!39;CL:0000221!5.04e-08!44;CL:0000133!5.04e-08!44;CL:0002319!6.79e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-23,23;CL:0000337,1.23e-23,23;CL:0000540,1.34e-15,33;CL:0000047,1.34e-15,33;CL:0000031,1.34e-15,33;CL:0000404,1.34e-15,33;CL:0000393,3.98e-12,39;CL:0000211,3.98e-12,39;CL:0002319,2.26e-10,43;CL:0000221,5.48e-10,44;CL:0000133,5.48e-10,44;CL:0002609,6.41e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.21e-28!71;UBERON:0003075!2.21e-28!71;UBERON:0007284!2.21e-28!71;UBERON:0001017!2.56e-26!73;UBERON:0005743!2.56e-26!73;UBERON:0000073!2.28e-25!75;UBERON:0001016!2.28e-25!75;UBERON:0001049!3.40e-25!52;UBERON:0005068!3.40e-25!52;UBERON:0006241!3.40e-25!52;UBERON:0007135!3.40e-25!52;UBERON:0000033!2.39e-23!63;UBERON:0004121!3.48e-23!102;UBERON:0000924!3.48e-23!102;UBERON:0006601!3.48e-23!102;UBERON:0003056!2.26e-22!49;UBERON:0000955!2.95e-22!50;UBERON:0006238!2.95e-22!50;UBERON:0002616!1.66e-21!49;UBERON:0003080!3.32e-20!40;UBERON:0002780!1.86e-19!39;UBERON:0001890!1.86e-19!39;UBERON:0006240!1.86e-19!39;UBERON:0002020!3.85e-18!34;UBERON:0002791!7.31e-15!29;UBERON:0003528!7.31e-15!29;UBERON:0001893!7.31e-15!29;UBERON:0000153!1.72e-11!94;UBERON:0007811!3.84e-11!86;UBERON:0000956!6.26e-10!21;UBERON:0001869!6.26e-10!21;UBERON:0000203!6.26e-10!21;UBERON:0002619!9.53e-08!17;UBERON:0002021!4.56e-07!10;UBERON:0000411!4.56e-07!10;UBERON:0001950!4.56e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.08e-42,54;UBERON:0001049,6.13e-42,52;UBERON:0005068,6.13e-42,52;UBERON:0006241,6.13e-42,52;UBERON:0007135,6.13e-42,52;UBERON:0002346,2.93e-39,64;UBERON:0003075,2.93e-39,64;UBERON:0007284,2.93e-39,64;UBERON:0001017,7.06e-38,73;UBERON:0001016,1.88e-36,75;UBERON:0000955,1.11e-35,47;UBERON:0006238,1.11e-35,47;UBERON:0002616,2.35e-34,46;UBERON:0010371,1.41e-32,73;UBERON:0003080,1.10e-31,40;UBERON:0002020,4.45e-31,34;UBERON:0002780,2.28e-30,39;UBERON:0001890,2.28e-30,39;UBERON:0006240,2.28e-30,39;UBERON:0004121,2.43e-30,95;UBERON:0000924,2.43e-30,95;UBERON:0006601,2.43e-30,95;UBERON:0003056,6.15e-30,49;UBERON:0003528,3.49e-25,29;UBERON:0002791,3.49e-25,29;UBERON:0001893,3.49e-25,29;UBERON:0010314,6.68e-24,92;UBERON:0000956,2.42e-16,21;UBERON:0001869,2.42e-16,21;UBERON:0000203,2.42e-16,21;UBERON:0000025,2.68e-13,114;UBERON:0002619,1.90e-12,17;UBERON:0004111,1.44e-11,122;UBERON:0002420,4.13e-10,8;UBERON:0007245,4.13e-10,8;UBERON:0010009,4.13e-10,8;UBERON:0010011,4.13e-10,8;UBERON:0000454,4.13e-10,8;UBERON:0003076,4.33e-10,12;UBERON:0003057,4.33e-10,12;UBERON:0002021,7.27e-10,10;UBERON:0000411,7.27e-10,10;UBERON:0001950,7.27e-10,10;UBERON:0002240,2.55e-08,6;UBERON:0005174,2.55e-08,6;UBERON:0001137,2.55e-08,6;UBERON:0001948,4.89e-07,5;UBERON:0002315,4.89e-07,5|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0,2.22548106945558,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,2.48855069540346,2.02508907497536,1.89292465216244,2.57085885963423,2.20868540951614,2.9397791811589,1.43768206527355,2.75765635983006,0,4.59674417106676,3.37934373163736,3.16527090552465,2.92760459527711,2.08365348222704,2.79182999001381,5.6276261003168,3.97275444219706,6.48182888042069,2.13557521198654,5.21918448310842,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,1.46390398505774,3.77004072264219,0,0,0,0,3.89455662452539,1.83000241127451,2.76439574648302,3.99795936442236,2.04572365864264,2.49345653471472,4.2182728397617,0.611036183101898,0,0,0.420883711772948,1.69156575851515,1.14951052216736,1.26043490863744,1.05493372485001,0.476255494059295,0.384341160854549,0.468508622798644,0.517406741478031,0.431135985865684,0.756424320671277,0.527853372491847,0.43839146485515,0.834141747676794,0,0.205782136407943,1.99034266818493,0,0,0,1.24275463521301,0.234526059981096,0.540186184383045,0,0,0.462801338662135,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,1.89260953707715,3.49875682089567,0,0,1.2797295032114,0.464473343720877,0.257734922644187,0,0,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0,0,0.189667900953082,0.228497025219458,0,0.814605311381257,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,1.43768206527355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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=30959 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QY15 | |||
|association_with_transcript=-35bp_to_ENSMUST00000034612,NM_013932,uc012gqi.1_5end | |||
|cluster_id=chr9:35366090..35366103,- | |||
|description=CAGE_peak_4_at_Ddx25_5end | |||
|id=chr9:35366090..35366103,- | |||
|ontology_enrichment_celltype=CL:0000117!1.73e-13!23;CL:0000337!1.73e-13!23;CL:0000540!4.31e-13!33;CL:0000047!4.31e-13!33;CL:0000031!4.31e-13!33;CL:0000404!4.31e-13!33;CL:0000393!1.48e-09!39;CL:0000211!1.48e-09!39;CL:0000221!5.04e-08!44;CL:0000133!5.04e-08!44;CL:0002319!6.79e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-23,23;CL:0000337,1.23e-23,23;CL:0000540,1.34e-15,33;CL:0000047,1.34e-15,33;CL:0000031,1.34e-15,33;CL:0000404,1.34e-15,33;CL:0000393,3.98e-12,39;CL:0000211,3.98e-12,39;CL:0002319,2.26e-10,43;CL:0000221,5.48e-10,44;CL:0000133,5.48e-10,44;CL:0002609,6.41e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.21e-28!71;UBERON:0003075!2.21e-28!71;UBERON:0007284!2.21e-28!71;UBERON:0001017!2.56e-26!73;UBERON:0005743!2.56e-26!73;UBERON:0000073!2.28e-25!75;UBERON:0001016!2.28e-25!75;UBERON:0001049!3.40e-25!52;UBERON:0005068!3.40e-25!52;UBERON:0006241!3.40e-25!52;UBERON:0007135!3.40e-25!52;UBERON:0000033!2.39e-23!63;UBERON:0004121!3.48e-23!102;UBERON:0000924!3.48e-23!102;UBERON:0006601!3.48e-23!102;UBERON:0003056!2.26e-22!49;UBERON:0000955!2.95e-22!50;UBERON:0006238!2.95e-22!50;UBERON:0002616!1.66e-21!49;UBERON:0003080!3.32e-20!40;UBERON:0002780!1.86e-19!39;UBERON:0001890!1.86e-19!39;UBERON:0006240!1.86e-19!39;UBERON:0002020!3.85e-18!34;UBERON:0002791!7.31e-15!29;UBERON:0003528!7.31e-15!29;UBERON:0001893!7.31e-15!29;UBERON:0000153!1.72e-11!94;UBERON:0007811!3.84e-11!86;UBERON:0000956!6.26e-10!21;UBERON:0001869!6.26e-10!21;UBERON:0000203!6.26e-10!21;UBERON:0002619!9.53e-08!17;UBERON:0002021!4.56e-07!10;UBERON:0000411!4.56e-07!10;UBERON:0001950!4.56e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.08e-42,54;UBERON:0001049,6.13e-42,52;UBERON:0005068,6.13e-42,52;UBERON:0006241,6.13e-42,52;UBERON:0007135,6.13e-42,52;UBERON:0002346,2.93e-39,64;UBERON:0003075,2.93e-39,64;UBERON:0007284,2.93e-39,64;UBERON:0001017,7.06e-38,73;UBERON:0001016,1.88e-36,75;UBERON:0000955,1.11e-35,47;UBERON:0006238,1.11e-35,47;UBERON:0002616,2.35e-34,46;UBERON:0010371,1.41e-32,73;UBERON:0003080,1.10e-31,40;UBERON:0002020,4.45e-31,34;UBERON:0002780,2.28e-30,39;UBERON:0001890,2.28e-30,39;UBERON:0006240,2.28e-30,39;UBERON:0004121,2.43e-30,95;UBERON:0000924,2.43e-30,95;UBERON:0006601,2.43e-30,95;UBERON:0003056,6.15e-30,49;UBERON:0003528,3.49e-25,29;UBERON:0002791,3.49e-25,29;UBERON:0001893,3.49e-25,29;UBERON:0010314,6.68e-24,92;UBERON:0000956,2.42e-16,21;UBERON:0001869,2.42e-16,21;UBERON:0000203,2.42e-16,21;UBERON:0000025,2.68e-13,114;UBERON:0002619,1.90e-12,17;UBERON:0004111,1.44e-11,122;UBERON:0002420,4.13e-10,8;UBERON:0007245,4.13e-10,8;UBERON:0010009,4.13e-10,8;UBERON:0010011,4.13e-10,8;UBERON:0000454,4.13e-10,8;UBERON:0003076,4.33e-10,12;UBERON:0003057,4.33e-10,12;UBERON:0002021,7.27e-10,10;UBERON:0000411,7.27e-10,10;UBERON:0001950,7.27e-10,10;UBERON:0002240,2.55e-08,6;UBERON:0005174,2.55e-08,6;UBERON:0001137,2.55e-08,6;UBERON:0001948,4.89e-07,5;UBERON:0002315,4.89e-07,5 | |||
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|short_description=p4@Ddx25 | |||
}} |
Latest revision as of 14:15, 26 September 2015
Short description: | p4@Ddx25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ddx25_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -35bp_to_ENSMUST00000034612, NM_013932, uc012gqi.1_5end |
EntrezGene: | Ddx25 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.23e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.23e-23 | 23 |
neuron | 1.34e-15 | 33 |
neuronal stem cell | 1.34e-15 | 33 |
neuroblast | 1.34e-15 | 33 |
electrically signaling cell | 1.34e-15 | 33 |
electrically responsive cell | 3.98e-12 | 39 |
electrically active cell | 3.98e-12 | 39 |
neural cell | 2.26e-10 | 43 |
ectodermal cell | 5.48e-10 | 44 |
neurectodermal cell | 5.48e-10 | 44 |
neuron of cerebral cortex | 6.41e-07 | 6 |