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FFCP PHASE1:Mm9::chr12:35591550..35591565,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=79221
|EntrezGene=79221
|HGNC=
|HGNC=
|MCL_coexpression_id=251
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=83bp_to_uc007njd.1_5end
|association_with_transcript=83bp_to_uc007njd.1_5end
|cluster_id=chr12:35591550..35591565,-
|description=CAGE_peak_4_at_Hdac9_5end
|description=CAGE_peak_4_at_Hdac9_5end
|id=chr12:35591550..35591565,-
|id=chr12:35591550..35591565,-
|ontology_enrichment_celltype=CL:0000117!2.58e-08!23;CL:0000337!2.58e-08!23;CL:0000540!2.56e-07!33;CL:0000047!2.56e-07!33;CL:0000031!2.56e-07!33;CL:0000404!2.56e-07!33
|ontology_enrichment_celltype=CL:0000117!2.58e-08!23;CL:0000337!2.58e-08!23;CL:0000540!2.56e-07!33;CL:0000047!2.56e-07!33;CL:0000031!2.56e-07!33;CL:0000404!2.56e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-11,23;CL:0000337,1.15e-11,23;CL:0000393,6.30e-08,39;CL:0000211,6.30e-08,39;CL:0000540,8.89e-08,33;CL:0000047,8.89e-08,33;CL:0000031,8.89e-08,33;CL:0000404,8.89e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0001017!1.49e-16!73;UBERON:0005743!1.49e-16!73;UBERON:0001049!3.22e-16!52;UBERON:0005068!3.22e-16!52;UBERON:0006241!3.22e-16!52;UBERON:0007135!3.22e-16!52;UBERON:0000073!8.41e-16!75;UBERON:0001016!8.41e-16!75;UBERON:0000033!1.43e-15!63;UBERON:0000955!1.62e-15!50;UBERON:0006238!1.62e-15!50;UBERON:0002616!7.98e-15!49;UBERON:0003056!2.02e-14!49;UBERON:0002346!3.86e-14!71;UBERON:0003075!3.86e-14!71;UBERON:0007284!3.86e-14!71;UBERON:0004121!4.74e-13!102;UBERON:0000924!4.74e-13!102;UBERON:0006601!4.74e-13!102;UBERON:0003080!1.21e-12!40;UBERON:0002780!4.86e-12!39;UBERON:0001890!4.86e-12!39;UBERON:0006240!4.86e-12!39;UBERON:0000153!7.76e-12!94;UBERON:0002020!9.96e-12!34;UBERON:0002791!5.24e-09!29;UBERON:0003528!5.24e-09!29;UBERON:0001893!5.24e-09!29;UBERON:0007811!1.20e-08!86;UBERON:0002021!1.29e-07!10;UBERON:0000411!1.29e-07!10;UBERON:0001950!1.29e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.02e-31,54;UBERON:0001049,1.11e-28,52;UBERON:0005068,1.11e-28,52;UBERON:0006241,1.11e-28,52;UBERON:0007135,1.11e-28,52;UBERON:0001017,1.69e-27,73;UBERON:0001016,2.09e-26,75;UBERON:0002346,5.89e-24,64;UBERON:0003075,5.89e-24,64;UBERON:0007284,5.89e-24,64;UBERON:0000955,2.62e-23,47;UBERON:0006238,2.62e-23,47;UBERON:0002616,5.27e-22,46;UBERON:0004121,2.13e-21,95;UBERON:0000924,2.13e-21,95;UBERON:0006601,2.13e-21,95;UBERON:0010371,1.00e-20,73;UBERON:0003080,6.54e-20,40;UBERON:0002020,8.45e-20,34;UBERON:0002780,9.32e-19,39;UBERON:0001890,9.32e-19,39;UBERON:0006240,9.32e-19,39;UBERON:0003056,2.60e-17,49;UBERON:0003528,1.78e-14,29;UBERON:0002791,1.78e-14,29;UBERON:0001893,1.78e-14,29;UBERON:0010314,5.44e-14,92;UBERON:0002021,7.36e-14,10;UBERON:0000411,7.36e-14,10;UBERON:0001950,7.36e-14,10;UBERON:0003076,2.78e-09,12;UBERON:0003057,2.78e-09,12;UBERON:0004111,2.99e-09,122;UBERON:0002420,6.41e-09,8;UBERON:0007245,6.41e-09,8;UBERON:0010009,6.41e-09,8;UBERON:0010011,6.41e-09,8;UBERON:0000454,6.41e-09,8;UBERON:0000025,1.21e-08,114;UBERON:0002619,1.33e-08,17;UBERON:0002240,2.84e-08,6;UBERON:0005174,2.84e-08,6;UBERON:0001137,2.84e-08,6;UBERON:0000956,8.38e-08,21;UBERON:0001869,8.38e-08,21;UBERON:0000203,8.38e-08,21;UBERON:0010708,1.98e-07,8;UBERON:0001948,3.26e-07,5;UBERON:0002315,3.26e-07,5
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.422366166455,0,0.171217968225505,0,0.342401459862411,0,0,0.202475267389826,0,0.946386496074713,0.685572168028694,0.42438965179803,0.935476191661768,0.198581902401771,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65100772129174,3.24406179902447,0.550640256485045,0,0,0,0,0.139986421625363,0,0.503347818173209,0.725362142011344,0.672187598284928,0,0,0,1.21389876515759,0.528990979272033,1.90149421051854,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0.135005938331691,0.420649922702764,1.99955689082663,2.87129103237098,0.367472397644862,0.0958454710182364,0.919218786610021,6.60695285996332,10.9811110753261,9.83081812839958,1.45074916503213,1.73826522844578,1.04182674111352,3.62937898701795,1.68828783009504,5.04234217663473,3.53554302568401,4.8406371471695,2.98239113320481,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0.259786004602869,0,1.40843419776681,0,0,0,0,0.253359865475099,0,0.11418387971906,5.95557132388495,0,0.346970653532272,0,0.461230994512117,0,0,0,0,0.433798070759735,0.884610551949874,0.161766849947409,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,4.79330046095433,1.83000241127451,1.38219787324151,4.34560800480691,3.3243009452943,10.1816141834184,6.48965052271031,0.305518091550949,0,0,0.210441855886474,1.56144531555244,0.919608417733892,0.540186389416048,0.452114453507145,0.680364991513279,0.896796041993948,0.749613796477831,1.81092359517311,1.72454394346274,2.08016688184601,2.99116911078713,0.876782929710299,4.17070873838397,1.0447564995665,1.85203922767149,0.796137067273973,0,0,0,0.828503090142008,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.162137619091711,0,0.219550115291051,0.268412837520744,3.15434922846191,0.720332286654991,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,1.14248512609729,0,0.407302655690628,0.775809948670503,0.350679099451593,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.651859905768103,0.339490171550376,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.690739927463582,0.723245292907558,0,0,0.491764273019036,0.275936746304732,2.40825884981688,2.81308047821288,0,0,0,0.390438744296638,0.861693590931196,1.43381278771531,0.891194696329576,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,26.66966926301,0,0.534196811001766,0.162886959353576,0.824850614862677,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,2.04263763452273,1.26042765821917,0.388076051348264,0.428674070063185,1.06404140185364,1.42695054081656,1.31639216481697,0.304464949114599,0.704015124191131,0,0.220528398054962,0,0.161464426695906,0.361877549568935,0.238744688006273,0.328281799490123,0.582961673259701,2.41052892613663,1.19609616558497,0,0,0.376736914009382,0.820165366326151,0.457556346413045,0.169978429993855,0.279902904647316,0.138199973804424,0,0.632671987162271,0.813277868507395,0.432021363287205,0.627264888043406,0.218362563746178,0.404593039154462,0.41326727862668,0.785267825952089,1.42576470620972,0,0.56369293868419,0.299033092087958,0.330916980914195,0.194451188344048,0.129159823477731,0,0.117357238645754,0.13020438484395,0.524296722128554,0.483168241652012,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0.302899349844443,0.304827226619999,0,0.877120926657772,0.288635524920988,0.233753804363138,0,0.221985953374065,0.179427713218951,0.503653849092235,1.35232715822533,0.563047426353546,0.183151624267265,1.50057865355346,0,6.21227026878773,5.52390283808612,2.86447756719698,4.81188910562325,2.05524755931193,3.7769694869485,5.40018000185445,5.40385443869065,2.26571204492102,4.65984280576638,0.31136204275253,1.59609949360412,0.682934423016537,0.729320151204882,0.419226325255965,0.735374033800057,1.11123363900808,0.412070114477788,0.320919209591815,2.02157769411038,0.25347929989024,0.754505365544305,0.936415074698824,1.08842759088278,0.804096565378586,0.476293691283074,0.695305955669133,0.38581844092741,0.412085900803307,0.588795680537589,1.02860775715625,0.532427418478012,1.43061713968393,0.872078499793971,0.846984423737976,0.507687647350059,1.28049581010941,0.526139422875686,1.08643291076689,1.68342681497322,0.593175090620871,0.591026894253381,0,1.08455788830176,0.578719832943424,0.249810577937946,0,0.214871054048298,0.57386499620653,0.661774257358546,0.695603506861264
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|short_description=p4@Hdac9
|short_description=p4@Hdac9
}}
}}

Latest revision as of 14:02, 26 September 2015

Short description:p4@Hdac9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Hdac9_5end
Coexpression cluster:MCL_coexpression_mm9:251
Association with transcript: 83bp_to_uc007njd.1_5end
EntrezGene:Hdac9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Hdac9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H95.96
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I926.67
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.15e-1123
neuroblast (sensu Vertebrata)1.15e-1123
electrically responsive cell6.30e-0839
electrically active cell6.30e-0839
neuron8.89e-0833
neuronal stem cell8.89e-0833
neuroblast8.89e-0833
electrically signaling cell8.89e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.02e-3154
neural tube1.11e-2852
neural rod1.11e-2852
future spinal cord1.11e-2852
neural keel1.11e-2852
central nervous system1.69e-2773
nervous system2.09e-2675
neurectoderm5.89e-2464
neural plate5.89e-2464
presumptive neural plate5.89e-2464
brain2.62e-2347
future brain2.62e-2347
regional part of brain5.27e-2246
ectoderm-derived structure2.13e-2195
ectoderm2.13e-2195
presumptive ectoderm2.13e-2195
ecto-epithelium1.00e-2073
anterior neural tube6.54e-2040
gray matter8.45e-2034
regional part of forebrain9.32e-1939
forebrain9.32e-1939
future forebrain9.32e-1939
pre-chordal neural plate2.60e-1749
brain grey matter1.78e-1429
regional part of telencephalon1.78e-1429
telencephalon1.78e-1429
structure with developmental contribution from neural crest5.44e-1492
occipital lobe7.36e-1410
visual cortex7.36e-1410
neocortex7.36e-1410
posterior neural tube2.78e-0912
chordal neural plate2.78e-0912
anatomical conduit2.99e-09122
basal ganglion6.41e-098
nuclear complex of neuraxis6.41e-098
aggregate regional part of brain6.41e-098
collection of basal ganglia6.41e-098
cerebral subcortex6.41e-098
tube1.21e-08114
regional part of cerebral cortex1.33e-0817
spinal cord2.84e-086
dorsal region element2.84e-086
dorsum2.84e-086
cerebral cortex8.38e-0821
cerebral hemisphere8.38e-0821
pallium8.38e-0821
pectoral complex1.98e-078
regional part of spinal cord3.26e-075
gray matter of spinal cord3.26e-075
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