FFCP PHASE1:Mm9::chr12:34613267..34613272,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=114712 | |EntrezGene=114712 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=Q923Z4 | |UniProt=Q923Z4 | ||
|association_with_transcript=-17bp_to_ENSMUST00000061035,NM_033522,uc007niv.1_5end | |association_with_transcript=-17bp_to_ENSMUST00000061035,NM_033522,uc007niv.1_5end | ||
|cluster_id=chr12:34613267..34613272,+ | |||
|description=CAGE_peak_1_at_Ferd3l_5end | |description=CAGE_peak_1_at_Ferd3l_5end | ||
|id=chr12:34613267..34613272,+ | |id=chr12:34613267..34613272,+ | ||
|ontology_enrichment_celltype=CL:0002610!2.89e-30!3;CL:0000117!1.99e-15!23;CL:0000337!1.99e-15!23;CL:0002613!2.70e-14!3;CL:0000540!9.45e-11!33;CL:0000047!9.45e-11!33;CL:0000031!9.45e-11!33;CL:0000404!9.45e-11!33;CL:0000393!4.36e-09!39;CL:0000211!4.36e-09!39;CL:0002319!3.12e-08!43;CL:0000221!4.83e-08!44;CL:0000133!4.83e-08!44;CL:0000055!4.62e-07!50 | |ontology_enrichment_celltype=CL:0002610!2.89e-30!3;CL:0000117!1.99e-15!23;CL:0000337!1.99e-15!23;CL:0002613!2.70e-14!3;CL:0000540!9.45e-11!33;CL:0000047!9.45e-11!33;CL:0000031!9.45e-11!33;CL:0000404!9.45e-11!33;CL:0000393!4.36e-09!39;CL:0000211!4.36e-09!39;CL:0002319!3.12e-08!43;CL:0000221!4.83e-08!44;CL:0000133!4.83e-08!44;CL:0000055!4.62e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,7.89e-30,3;CL:0002613,7.89e-30,3;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004684!2.89e-30!3;UBERON:0002275!2.89e-30!3;UBERON:0000369!5.88e-09!5;UBERON:0002435!5.88e-09!5;UBERON:0000204!5.88e-09!5;UBERON:0010082!5.88e-09!5;UBERON:0002616!3.20e-07!49;UBERON:0000955!4.50e-07!50;UBERON:0006238!4.50e-07!50 | |ontology_enrichment_uberon=UBERON:0004684!2.89e-30!3;UBERON:0002275!2.89e-30!3;UBERON:0000369!5.88e-09!5;UBERON:0002435!5.88e-09!5;UBERON:0000204!5.88e-09!5;UBERON:0010082!5.88e-09!5;UBERON:0002616!3.20e-07!49;UBERON:0000955!4.50e-07!50;UBERON:0006238!4.50e-07!50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,7.89e-30,3;UBERON:0002275,7.89e-30,3;UBERON:0000369,2.13e-18,5;UBERON:0002435,2.13e-18,5;UBERON:0000204,2.13e-18,5;UBERON:0010082,2.13e-18,5;UBERON:0002420,6.30e-12,8;UBERON:0007245,6.30e-12,8;UBERON:0010009,6.30e-12,8;UBERON:0010011,6.30e-12,8;UBERON:0000454,6.30e-12,8;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,1.53224805702225,0.768032666281217,1.05509030184155,2.37867873366265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,1.53224805702225,0.768032666281217,1.05509030184155,2.37867873366265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Ferd3l | |short_description=p1@Ferd3l | ||
}} | }} |
Latest revision as of 13:57, 26 September 2015
Short description: | p1@Ferd3l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ferd3l_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -17bp_to_ENSMUST00000061035, NM_033522, uc007niv.1_5end |
EntrezGene: | Ferd3l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 7.89e-30 | 3 |
striatum neuron | 7.89e-30 | 3 |
CNS neuron (sensu Vertebrata) | 6.04e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-16 | 23 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 7.89e-30 | 3 |
reticular formation | 7.89e-30 | 3 |
corpus striatum | 2.13e-18 | 5 |
striatum | 2.13e-18 | 5 |
ventral part of telencephalon | 2.13e-18 | 5 |
future corpus striatum | 2.13e-18 | 5 |
basal ganglion | 6.30e-12 | 8 |
nuclear complex of neuraxis | 6.30e-12 | 8 |
aggregate regional part of brain | 6.30e-12 | 8 |
collection of basal ganglia | 6.30e-12 | 8 |
cerebral subcortex | 6.30e-12 | 8 |
regional part of nervous system | 2.91e-07 | 54 |