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FFCP PHASE1:Mm9::chr6:118147812..118147826,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19713
|EntrezGene=19713
|HGNC=
|HGNC=
|MCL_coexpression_id=114
|TSSclassifier=NA
|UniProt=P35546
|UniProt=P35546
|association_with_transcript=-50bp_to_ENSMUST00000032201,ENSMUST00000088790,NM_001080780,NM_009050,uc009dlm.1,uc009dln.1_5end
|association_with_transcript=-50bp_to_ENSMUST00000032201,ENSMUST00000088790,NM_001080780,NM_009050,uc009dlm.1,uc009dln.1_5end
|cluster_id=chr6:118147812..118147826,-
|description=CAGE_peak_4_at_Ret_5end
|description=CAGE_peak_4_at_Ret_5end
|id=chr6:118147812..118147826,-
|id=chr6:118147812..118147826,-
|ontology_enrichment_celltype=CL:0000540!2.03e-20!33;CL:0000047!2.03e-20!33;CL:0000031!2.03e-20!33;CL:0000404!2.03e-20!33;CL:0000393!2.89e-16!39;CL:0000211!2.89e-16!39;CL:0002319!1.32e-14!43;CL:0000221!5.62e-14!44;CL:0000133!5.62e-14!44;CL:0000117!1.98e-13!23;CL:0000337!1.98e-13!23;CL:0000055!1.54e-11!50;CL:0000107!2.09e-09!9
|ontology_enrichment_celltype=CL:0000540!2.03e-20!33;CL:0000047!2.03e-20!33;CL:0000031!2.03e-20!33;CL:0000404!2.03e-20!33;CL:0000393!2.89e-16!39;CL:0000211!2.89e-16!39;CL:0002319!1.32e-14!43;CL:0000221!5.62e-14!44;CL:0000133!5.62e-14!44;CL:0000117!1.98e-13!23;CL:0000337!1.98e-13!23;CL:0000055!1.54e-11!50;CL:0000107!2.09e-09!9
|ontology_enrichment_celltype_v019_2=CL:0000540,2.78e-48,33;CL:0000047,2.78e-48,33;CL:0000031,2.78e-48,33;CL:0000404,2.78e-48,33;CL:0000393,4.15e-40,39;CL:0000211,4.15e-40,39;CL:0002319,6.36e-36,43;CL:0000221,5.38e-35,44;CL:0000133,5.38e-35,44;CL:0000107,1.06e-26,9;CL:0000117,5.50e-26,23;CL:0000337,5.50e-26,23;CL:0002321,3.67e-20,70;CL:0000723,2.35e-14,91;CL:0000048,2.35e-14,91;CL:0000034,3.72e-13,97;CL:0002612,3.56e-10,3;CL:0000120,1.39e-09,3;CL:0002613,7.16e-09,3;CL:0002611,1.87e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.29e-14!102;UBERON:0000924!2.29e-14!102;UBERON:0006601!2.29e-14!102;UBERON:0001017!7.42e-14!73;UBERON:0005743!7.42e-14!73;UBERON:0000073!1.25e-13!75;UBERON:0001016!1.25e-13!75;UBERON:0002346!1.34e-09!71;UBERON:0003075!1.34e-09!71;UBERON:0007284!1.34e-09!71;UBERON:0002410!2.09e-09!9;UBERON:0000010!4.53e-08!11
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.06e-26,9;UBERON:0000010,1.50e-21,11;UBERON:0004121,4.10e-21,95;UBERON:0000924,4.10e-21,95;UBERON:0006601,4.10e-21,95;UBERON:0001017,5.70e-21,73;UBERON:0001016,2.83e-20,75;UBERON:0001948,5.40e-16,5;UBERON:0002315,5.40e-16,5;UBERON:0002240,2.85e-13,6;UBERON:0005174,2.85e-13,6;UBERON:0001137,2.85e-13,6;UBERON:0000013,1.08e-10,3;UBERON:0002257,3.56e-10,3;UBERON:0010313,9.94e-10,3;UBERON:0002342,9.94e-10,3;UBERON:0002005,9.94e-10,3;UBERON:0005428,9.94e-10,3;UBERON:0005062,9.94e-10,3;UBERON:0002346,1.03e-09,64;UBERON:0003075,1.03e-09,64;UBERON:0007284,1.03e-09,64;UBERON:0000011,1.70e-09,3;UBERON:0002420,8.71e-09,8;UBERON:0007245,8.71e-09,8;UBERON:0010009,8.71e-09,8;UBERON:0010011,8.71e-09,8;UBERON:0000454,8.71e-09,8;UBERON:0010371,4.45e-08,73;UBERON:0002256,1.87e-07,2;UBERON:0002020,4.22e-07,34
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,3.03474691289397,3.1739458756322,2.53532561402472,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0.599200221036809,0,0.103689612308478,0,0.420649922702764,3.99911378165325,3.97563373712904,0.122490799214954,0.191690942036473,0,1.10115880999389,1.27687338085188,0.921639199537461,1.31886287730194,2.65314166446988,1.04182674111352,1.3959149950069,3.93933827022176,0.916789486660861,3.83017161115768,4.55589378557129,3.35519002485541,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.748953197024114,0,0.628271760564322,0,0,0.83115217823824,0.811206315338788,0,0,0,0,0.130120442962704,1.14951052216736,1.26043490863744,0.90422890701429,1.29269348387523,1.15302348256365,0.843315521037559,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.492502392237286,0.0810688095458557,0.292399974850665,0,0,0,0.102904612379284,0,0,0.639864751605702,0,0.902072229254653,0.605050573870028,0,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0.504941854408746,3.15508219416257,2.73307121007647,3.66219776145758,2.15071918157297,2.00518806674155,3.67999490025482,9.71545684019746,6.13737301613755,5.92931666919785,1.28528526568723,0,0,0,0,0,0,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0.535106452806212,0.329098041204242,0,0,0,0.441056796109924,0.32977250588296,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.406638934253697,0.756037385752609,0.209088296014469,0.436725127492355,0.269728692769641,0.330613822901344,0,0,0,0,0,0.165458490457098,0,0,0,0,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,1.28367683836726,0.505394423527595,0.50695859978048,0.943131706930381,0.37456602987953,0.384150914429216,0.574354689556133,0,0.231768651889711,0,0,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.564656282491984,0,0.365855945745545,0.789209134313529,0.271608227691724,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,1.24905288968973,0.233931608445408,0.429742108096597,0.382576664137687,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,3.03474691289397,3.1739458756322,2.53532561402472,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0.599200221036809,0,0.103689612308478,0,0.420649922702764,3.99911378165325,3.97563373712904,0.122490799214954,0.191690942036473,0,1.10115880999389,1.27687338085188,0.921639199537461,1.31886287730194,2.65314166446988,1.04182674111352,1.3959149950069,3.93933827022176,0.916789486660861,3.83017161115768,4.55589378557129,3.35519002485541,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.748953197024114,0,0.628271760564322,0,0,0.83115217823824,0.811206315338788,0,0,0,0,0.130120442962704,1.14951052216736,1.26043490863744,0.90422890701429,1.29269348387523,1.15302348256365,0.843315521037559,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.492502392237286,0.0810688095458557,0.292399974850665,0,0,0,0.102904612379284,0,0,0.639864751605702,0,0.902072229254653,0.605050573870028,0,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0.504941854408746,3.15508219416257,2.73307121007647,3.66219776145758,2.15071918157297,2.00518806674155,3.67999490025482,9.71545684019746,6.13737301613755,5.92931666919785,1.28528526568723,0,0,0,0,0,0,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0.535106452806212,0.329098041204242,0,0,0,0.441056796109924,0.32977250588296,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.406638934253697,0.756037385752609,0.209088296014469,0.436725127492355,0.269728692769641,0.330613822901344,0,0,0,0,0,0.165458490457098,0,0,0,0,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,1.28367683836726,0.505394423527595,0.50695859978048,0.943131706930381,0.37456602987953,0.384150914429216,0.574354689556133,0,0.231768651889711,0,0,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.564656282491984,0,0.365855945745545,0.789209134313529,0.271608227691724,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,1.24905288968973,0.233931608445408,0.429742108096597,0.382576664137687,0,0
|short_description=p4@Ret
|short_description=p4@Ret
}}
}}

Latest revision as of 13:03, 26 September 2015

Short description:p4@Ret
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ret_5end
Coexpression cluster:MCL_coexpression_mm9:114
Association with transcript: -50bp_to_ENSMUST00000032201, ENSMUST00000088790, NM_001080780, NM_009050, uc009dlm.1, uc009dln.1_5end
EntrezGene:Ret
Link to Zenbu:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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