FFCP PHASE1:Mm9::chr7:28271965..28271979,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:28271965..28271979,+
|short_description=p1@Sertad1
|description=CAGE_peak_1_at_Sertad1_5end
|association_with_transcript=0bp_to_NM_018820,uc009fwh.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=55942 | |EntrezGene=55942 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2291 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JL10 | |UniProt=Q9JL10 | ||
|association_with_transcript=0bp_to_NM_018820,uc009fwh.1_5end | |||
|cluster_id=chr7:28271965..28271979,+ | |||
|description=CAGE_peak_1_at_Sertad1_5end | |||
|id=chr7:28271965..28271979,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.64e-18!66;CL:0000219!8.16e-13!54;CL:0002320!5.20e-10!46;CL:0000134!5.20e-10!46;CL:0000144!1.19e-08!121;CL:0000012!1.19e-08!121;CL:0000988!2.48e-08!32;CL:0002032!2.48e-08!32;CL:0000037!2.48e-08!32;CL:0000566!2.48e-08!32;CL:0000837!2.48e-08!32;CL:0002371!2.02e-07!118;CL:0000066!5.27e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,8.16e-13,54;CL:0002320,5.20e-10,46;CL:0000134,5.20e-10,46;CL:0000988,2.48e-08,32;CL:0002032,2.48e-08,32;CL:0000037,2.48e-08,32;CL:0000837,2.48e-08,32;CL:0000066,5.27e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.20e-10!46;UBERON:0000344!1.14e-07!15;UBERON:0001242!5.69e-07!13;UBERON:0000060!5.69e-07!13;UBERON:0001262!5.69e-07!13;UBERON:0004786!5.69e-07!13;UBERON:0004923!6.02e-07!24;UBERON:0002204!9.14e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.20e-10,46;UBERON:0000344,1.14e-07,15;UBERON:0001242,5.69e-07,13;UBERON:0001262,5.69e-07,13;UBERON:0004786,5.69e-07,13;UBERON:0004923,6.02e-07,24;UBERON:0002204,9.14e-07,32 | |||
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| ||
|short_description=p1@Sertad1 | |||
}} | }} |
Latest revision as of 11:49, 26 September 2015
Short description: | p1@Sertad1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sertad1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2291 |
Association with transcript: | 0bp_to_NM_018820, uc009fwh.1_5end |
EntrezGene: | Sertad1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 8.16e-13 | 54 |
connective tissue cell | 5.20e-10 | 46 |
mesenchymal cell | 5.20e-10 | 46 |
hematopoietic cell | 2.48e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.48e-08 | 32 |
hematopoietic stem cell | 2.48e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.48e-08 | 32 |
epithelial cell | 5.27e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.20e-10 | 46 |
mucosa | 1.14e-07 | 15 |
intestinal mucosa | 5.69e-07 | 13 |
wall of intestine | 5.69e-07 | 13 |
gastrointestinal system mucosa | 5.69e-07 | 13 |
organ component layer | 6.02e-07 | 24 |
musculoskeletal system | 9.14e-07 | 32 |