FFCP PHASE1:Mm9::chr17:37199615..37199652,+: Difference between revisions
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{{FFCP|EntrezGene=54393|HGNC=|MCL_coexpression_id=313|UniProt=|association_with_transcript=-276bp_to_ENSMUST00000174181_5end|description=CAGE_peak_9_at_Gabbr1_5end|id=chr17:37199615..37199652,+|ontology_enrichment_celltype=CL:0000117!1.05e-16!23;CL:0000337!1.05e-16!23;CL:0000540!8.49e-12!33;CL:0000047!8.49e-12!33;CL:0000031!8.49e-12!33;CL:0000404!8.49e-12!33;CL:0000393!3.23e-11!39;CL:0000211!3.23e-11!39;CL:0002319!4.42e-09!43;CL:0000221!1.37e-08!44;CL:0000133!1.37e-08!44;CL:0000055!1.70e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.23e-33,23;CL:0000337,2.23e-33,23;CL:0000540,5.75e-22,33;CL:0000047,5.75e-22,33;CL:0000031,5.75e-22,33;CL:0000404,5.75e-22,33;CL:0000393,6.22e-18,39;CL:0000211,6.22e-18,39;CL:0002319,9.70e-18,43;CL:0000221,3.10e-17,44;CL:0000133,3.10e-17,44;CL:0002610,1.81e-09,3;CL:0002321,3.29e-09,70;CL:0002614,5.78e-09,3;CL:0002612,2.38e-08,3;CL:0002613,9.77e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.57e-22!73;UBERON:0005743!3.57e-22!73;UBERON:0000073!2.06e-21!75;UBERON:0001016!2.06e-21!75;UBERON:0002020!4.71e-21!34;UBERON:0001049!1.02e-20!52;UBERON:0005068!1.02e-20!52;UBERON:0006241!1.02e-20!52;UBERON:0007135!1.02e-20!52;UBERON:0000955!1.82e-19!50;UBERON:0006238!1.82e-19!50;UBERON:0002616!8.54e-19!49;UBERON:0000033!2.57e-18!63;UBERON:0002791!3.33e-17!29;UBERON:0003528!3.33e-17!29;UBERON:0001893!3.33e-17!29;UBERON:0002346!5.96e-17!71;UBERON:0003075!5.96e-17!71;UBERON:0007284!5.96e-17!71;UBERON:0003056!1.66e-16!49;UBERON:0003080!1.01e-15!40;UBERON:0002780!3.77e-15!39;UBERON:0001890!3.77e-15!39;UBERON:0006240!3.77e-15!39;UBERON:0004121!4.70e-15!102;UBERON:0000924!4.70e-15!102;UBERON:0006601!4.70e-15!102;UBERON:0000153!1.96e-12!94;UBERON:0007811!1.97e-12!86;UBERON:0000956!1.02e-11!21;UBERON:0001869!1.02e-11!21;UBERON:0000203!1.02e-11!21;UBERON:0002619!7.36e-10!17;UBERON:0002021!1.17e-08!10;UBERON:0000411!1.17e-08!10;UBERON:0001950!1.17e-08!10;UBERON:0000025!1.87e-08!114;UBERON:0004111!7.87e-07!122;UBERON:0002420!8.62e-07!8;UBERON:0007245!8.62e-07!8;UBERON:0010009!8.62e-07!8;UBERON:0010011!8.62e-07!8;UBERON:0000454!8.62e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.57e-39,34;UBERON:0000073,1.57e-37,54;UBERON:0001017,4.97e-37,73;UBERON:0001016,7.23e-36,75;UBERON:0001049,9.58e-33,52;UBERON:0005068,9.58e-33,52;UBERON:0006241,9.58e-33,52;UBERON:0007135,9.58e-33,52;UBERON:0003528,8.20e-28,29;UBERON:0002791,8.20e-28,29;UBERON:0001893,8.20e-28,29;UBERON:0004121,6.45e-27,95;UBERON:0000924,6.45e-27,95;UBERON:0006601,6.45e-27,95;UBERON:0002346,1.82e-25,64;UBERON:0003075,1.82e-25,64;UBERON:0007284,1.82e-25,64;UBERON:0002021,1.79e-24,10;UBERON:0000411,1.79e-24,10;UBERON:0001950,1.79e-24,10;UBERON:0002780,3.36e-24,39;UBERON:0001890,3.36e-24,39;UBERON:0006240,3.36e-24,39;UBERON:0000955,1.61e-23,47;UBERON:0006238,1.61e-23,47;UBERON:0003080,1.79e-23,40;UBERON:0002616,6.40e-22,46;UBERON:0010371,1.42e-21,73;UBERON:0002619,1.73e-19,17;UBERON:0003056,2.85e-18,49;UBERON:0000956,6.29e-18,21;UBERON:0001869,6.29e-18,21;UBERON:0000203,6.29e-18,21;UBERON:0010314,7.44e-16,92;UBERON:0002240,5.86e-15,6;UBERON:0005174,5.86e-15,6;UBERON:0001137,5.86e-15,6;UBERON:0001948,3.96e-13,5;UBERON:0002315,3.96e-13,5;UBERON:0000025,1.30e-11,114;UBERON:0002420,4.01e-11,8;UBERON:0007245,4.01e-11,8;UBERON:0010009,4.01e-11,8;UBERON:0010011,4.01e-11,8;UBERON:0000454,4.01e-11,8;UBERON:0004111,1.89e-10,122;UBERON:0011216,1.13e-09,194;UBERON:0003076,1.59e-09,12;UBERON:0003057,1.59e-09,12;UBERON:0004684,1.81e-09,3;UBERON:0002275,1.81e-09,3;UBERON:0002038,5.78e-09,3;UBERON:0009663,5.78e-09,3;UBERON:0009661,5.78e-09,3;UBERON:0000125,5.78e-09,3;UBERON:0002308,5.78e-09,3;UBERON:0002257,2.38e-08,3;UBERON:0002950,8.42e-07,4;UBERON:0001891,8.42e-07,4;UBERON:0009616,8.42e-07,4;UBERON:0010286,8.42e-07,4|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0.159544317990673,0.684802919724823,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.251793635951155,0.101376931219515,0.367093504323363,0,0,0.219686182734472,0,0.279972843250725,0,0.167782606057736,0,0,0.257259436035947,0,0,0.809265843438391,4.23192783417626,2.53532561402472,0,0,0,0,0,0,1.15265491596466,0.311068836925433,1.75507719831198,0.420649922702764,3.14216082844184,4.63823935998388,0.489963196859816,0.766763768145891,2.75765635983006,6.60695285996332,5.49055553766307,8.29475279583715,1.05509030184155,2.74462930807229,2.6045668527838,9.21303896704557,4.50210088025344,2.90316670775939,2.94628585473668,5.12538050876771,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0.484875253135222,0,2.34224637609238,0.628340120440365,0,0,0,0,0.898743836428936,0.915001205637253,0.879580464790051,0.869121600961382,1.02286182932132,2.70124457927428,1.29793010454206,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54393 | |||
|HGNC= | |||
|MCL_coexpression_id=313 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-276bp_to_ENSMUST00000174181_5end | |||
|cluster_id=chr17:37199615..37199652,+ | |||
|description=CAGE_peak_9_at_Gabbr1_5end | |||
|id=chr17:37199615..37199652,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.05e-16!23;CL:0000337!1.05e-16!23;CL:0000540!8.49e-12!33;CL:0000047!8.49e-12!33;CL:0000031!8.49e-12!33;CL:0000404!8.49e-12!33;CL:0000393!3.23e-11!39;CL:0000211!3.23e-11!39;CL:0002319!4.42e-09!43;CL:0000221!1.37e-08!44;CL:0000133!1.37e-08!44;CL:0000055!1.70e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.23e-33,23;CL:0000337,2.23e-33,23;CL:0000540,5.75e-22,33;CL:0000047,5.75e-22,33;CL:0000031,5.75e-22,33;CL:0000404,5.75e-22,33;CL:0000393,6.22e-18,39;CL:0000211,6.22e-18,39;CL:0002319,9.70e-18,43;CL:0000221,3.10e-17,44;CL:0000133,3.10e-17,44;CL:0002610,1.81e-09,3;CL:0002321,3.29e-09,70;CL:0002614,5.78e-09,3;CL:0002612,2.38e-08,3;CL:0002613,9.77e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.57e-22!73;UBERON:0005743!3.57e-22!73;UBERON:0000073!2.06e-21!75;UBERON:0001016!2.06e-21!75;UBERON:0002020!4.71e-21!34;UBERON:0001049!1.02e-20!52;UBERON:0005068!1.02e-20!52;UBERON:0006241!1.02e-20!52;UBERON:0007135!1.02e-20!52;UBERON:0000955!1.82e-19!50;UBERON:0006238!1.82e-19!50;UBERON:0002616!8.54e-19!49;UBERON:0000033!2.57e-18!63;UBERON:0002791!3.33e-17!29;UBERON:0003528!3.33e-17!29;UBERON:0001893!3.33e-17!29;UBERON:0002346!5.96e-17!71;UBERON:0003075!5.96e-17!71;UBERON:0007284!5.96e-17!71;UBERON:0003056!1.66e-16!49;UBERON:0003080!1.01e-15!40;UBERON:0002780!3.77e-15!39;UBERON:0001890!3.77e-15!39;UBERON:0006240!3.77e-15!39;UBERON:0004121!4.70e-15!102;UBERON:0000924!4.70e-15!102;UBERON:0006601!4.70e-15!102;UBERON:0000153!1.96e-12!94;UBERON:0007811!1.97e-12!86;UBERON:0000956!1.02e-11!21;UBERON:0001869!1.02e-11!21;UBERON:0000203!1.02e-11!21;UBERON:0002619!7.36e-10!17;UBERON:0002021!1.17e-08!10;UBERON:0000411!1.17e-08!10;UBERON:0001950!1.17e-08!10;UBERON:0000025!1.87e-08!114;UBERON:0004111!7.87e-07!122;UBERON:0002420!8.62e-07!8;UBERON:0007245!8.62e-07!8;UBERON:0010009!8.62e-07!8;UBERON:0010011!8.62e-07!8;UBERON:0000454!8.62e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.57e-39,34;UBERON:0000073,1.57e-37,54;UBERON:0001017,4.97e-37,73;UBERON:0001016,7.23e-36,75;UBERON:0001049,9.58e-33,52;UBERON:0005068,9.58e-33,52;UBERON:0006241,9.58e-33,52;UBERON:0007135,9.58e-33,52;UBERON:0003528,8.20e-28,29;UBERON:0002791,8.20e-28,29;UBERON:0001893,8.20e-28,29;UBERON:0004121,6.45e-27,95;UBERON:0000924,6.45e-27,95;UBERON:0006601,6.45e-27,95;UBERON:0002346,1.82e-25,64;UBERON:0003075,1.82e-25,64;UBERON:0007284,1.82e-25,64;UBERON:0002021,1.79e-24,10;UBERON:0000411,1.79e-24,10;UBERON:0001950,1.79e-24,10;UBERON:0002780,3.36e-24,39;UBERON:0001890,3.36e-24,39;UBERON:0006240,3.36e-24,39;UBERON:0000955,1.61e-23,47;UBERON:0006238,1.61e-23,47;UBERON:0003080,1.79e-23,40;UBERON:0002616,6.40e-22,46;UBERON:0010371,1.42e-21,73;UBERON:0002619,1.73e-19,17;UBERON:0003056,2.85e-18,49;UBERON:0000956,6.29e-18,21;UBERON:0001869,6.29e-18,21;UBERON:0000203,6.29e-18,21;UBERON:0010314,7.44e-16,92;UBERON:0002240,5.86e-15,6;UBERON:0005174,5.86e-15,6;UBERON:0001137,5.86e-15,6;UBERON:0001948,3.96e-13,5;UBERON:0002315,3.96e-13,5;UBERON:0000025,1.30e-11,114;UBERON:0002420,4.01e-11,8;UBERON:0007245,4.01e-11,8;UBERON:0010009,4.01e-11,8;UBERON:0010011,4.01e-11,8;UBERON:0000454,4.01e-11,8;UBERON:0004111,1.89e-10,122;UBERON:0011216,1.13e-09,194;UBERON:0003076,1.59e-09,12;UBERON:0003057,1.59e-09,12;UBERON:0004684,1.81e-09,3;UBERON:0002275,1.81e-09,3;UBERON:0002038,5.78e-09,3;UBERON:0009663,5.78e-09,3;UBERON:0009661,5.78e-09,3;UBERON:0000125,5.78e-09,3;UBERON:0002308,5.78e-09,3;UBERON:0002257,2.38e-08,3;UBERON:0002950,8.42e-07,4;UBERON:0001891,8.42e-07,4;UBERON:0009616,8.42e-07,4;UBERON:0010286,8.42e-07,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0.159544317990673,0.684802919724823,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.251793635951155,0.101376931219515,0.367093504323363,0,0,0.219686182734472,0,0.279972843250725,0,0.167782606057736,0,0,0.257259436035947,0,0,0.809265843438391,4.23192783417626,2.53532561402472,0,0,0,0,0,0,1.15265491596466,0.311068836925433,1.75507719831198,0.420649922702764,3.14216082844184,4.63823935998388,0.489963196859816,0.766763768145891,2.75765635983006,6.60695285996332,5.49055553766307,8.29475279583715,1.05509030184155,2.74462930807229,2.6045668527838,9.21303896704557,4.50210088025344,2.90316670775939,2.94628585473668,5.12538050876771,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0.484875253135222,0,2.34224637609238,0.628340120440365,0,0,0,0,0.898743836428936,0.915001205637253,0.879580464790051,0.869121600961382,1.02286182932132,2.70124457927428,1.29793010454206,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0.476255494059295,0.12811372028485,0.281105173679186,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.462801338662135,0.465067889500816,0,0,0.16455984991348,0,0,0,0,0,1.47202963994889,0.205809224758569,0,0,0.426576501070468,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0.809621403349789,0,0,1.92792789853084,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,0,1.11255181206306,0,0,0,0,0.27338845544205,0,0,0.139951452323658,0.138199973804424,0.954670618015114,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0,0,0,0,0.56369293868419,0,0.165458490457098,0.388902376688095,0.258319646955462,0.168956125490778,0.352071715937262,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0,0,0,0,0,3.3885110557024,3.68260189205742,5.15605962095457,2.92150409984269,1.37016503954128,5.2877572817279,2.02506750069542,3.15224842256954,2.26571204492102,3.62432218226274,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.187283014939765,0.192075457214608,0,0,0.231768651889711,0,0.824171801606613,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0.231867835620421 | |||
|short_description=p9@Gabbr1 | |||
}} |
Latest revision as of 11:32, 26 September 2015
Short description: | p9@Gabbr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Gabbr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:313 |
Association with transcript: | -276bp_to_ENSMUST00000174181_5end |
EntrezGene: | Gabbr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.23e-33 | 23 |
neuroblast (sensu Vertebrata) | 2.23e-33 | 23 |
neuron | 5.75e-22 | 33 |
neuronal stem cell | 5.75e-22 | 33 |
neuroblast | 5.75e-22 | 33 |
electrically signaling cell | 5.75e-22 | 33 |
electrically responsive cell | 6.22e-18 | 39 |
electrically active cell | 6.22e-18 | 39 |
neural cell | 9.70e-18 | 43 |
ectodermal cell | 3.10e-17 | 44 |
neurectodermal cell | 3.10e-17 | 44 |
raphe nuclei neuron | 1.81e-09 | 3 |
embryonic cell | 3.29e-09 | 70 |
neuron of the substantia nigra | 5.78e-09 | 3 |
neuron of the ventral spinal cord | 2.38e-08 | 3 |
striatum neuron | 9.77e-08 | 3 |