FFCP PHASE1:Mm9::chr1:137271676..137271687,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77552 | |EntrezGene=77552 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1683 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENSMUST00000159181_5end | |association_with_transcript=-22bp_to_ENSMUST00000159181_5end | ||
|cluster_id=chr1:137271676..137271687,- | |||
|description=CAGE_peak_6_at_Shisa4_5end | |description=CAGE_peak_6_at_Shisa4_5end | ||
|id=chr1:137271676..137271687,- | |id=chr1:137271676..137271687,- | ||
|ontology_enrichment_celltype=CL:0002319!3.00e-18!43;CL:0000221!3.73e-18!44;CL:0000133!3.73e-18!44;CL:0000055!4.05e-18!50;CL:0000393!4.67e-13!39;CL:0000211!4.67e-13!39;CL:0000540!2.49e-12!33;CL:0000047!2.49e-12!33;CL:0000031!2.49e-12!33;CL:0000404!2.49e-12!33;CL:0000117!2.07e-11!23;CL:0000337!2.07e-11!23;CL:0002321!1.43e-09!70;CL:0000220!1.43e-09!70;CL:0000333!3.85e-07!10;CL:0000095!3.85e-07!10;CL:0000243!3.85e-07!10;CL:0000123!3.85e-07!10;CL:0000125!3.85e-07!10;CL:0000030!3.85e-07!10;CL:0000339!3.85e-07!10;CL:0002453!5.74e-07!8 | |ontology_enrichment_celltype=CL:0002319!3.00e-18!43;CL:0000221!3.73e-18!44;CL:0000133!3.73e-18!44;CL:0000055!4.05e-18!50;CL:0000393!4.67e-13!39;CL:0000211!4.67e-13!39;CL:0000540!2.49e-12!33;CL:0000047!2.49e-12!33;CL:0000031!2.49e-12!33;CL:0000404!2.49e-12!33;CL:0000117!2.07e-11!23;CL:0000337!2.07e-11!23;CL:0002321!1.43e-09!70;CL:0000220!1.43e-09!70;CL:0000333!3.85e-07!10;CL:0000095!3.85e-07!10;CL:0000243!3.85e-07!10;CL:0000123!3.85e-07!10;CL:0000125!3.85e-07!10;CL:0000030!3.85e-07!10;CL:0000339!3.85e-07!10;CL:0002453!5.74e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.69e-19,43;CL:0000221,7.07e-19,44;CL:0000133,7.07e-19,44;CL:0000117,1.55e-18,23;CL:0000337,1.55e-18,23;CL:0002453,3.36e-13,8;CL:0002321,5.73e-13,70;CL:0000540,2.41e-11,33;CL:0000047,2.41e-11,33;CL:0000031,2.41e-11,33;CL:0000404,2.41e-11,33;CL:0000393,4.51e-11,39;CL:0000211,4.51e-11,39;CL:0000333,3.56e-10,10;CL:0000095,3.56e-10,10;CL:0000243,3.56e-10,10;CL:0000123,3.56e-10,10;CL:0000125,3.56e-10,10;CL:0000030,3.56e-10,10;CL:0000339,3.56e-10,10;CL:0000128,5.86e-10,6;CL:0000126,5.86e-10,6;CL:0000127,5.86e-10,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.99e-31!75;UBERON:0001016!7.99e-31!75;UBERON:0001017!3.04e-30!73;UBERON:0005743!3.04e-30!73;UBERON:0004121!6.31e-26!102;UBERON:0000924!6.31e-26!102;UBERON:0006601!6.31e-26!102;UBERON:0001049!1.11e-22!52;UBERON:0005068!1.11e-22!52;UBERON:0006241!1.11e-22!52;UBERON:0007135!1.11e-22!52;UBERON:0002346!1.97e-21!71;UBERON:0003075!1.97e-21!71;UBERON:0007284!1.97e-21!71;UBERON:0002020!1.67e-20!34;UBERON:0000955!9.73e-20!50;UBERON:0006238!9.73e-20!50;UBERON:0000033!3.26e-19!63;UBERON:0002616!4.09e-19!49;UBERON:0003056!7.89e-18!49;UBERON:0002791!3.89e-17!29;UBERON:0003528!3.89e-17!29;UBERON:0001893!3.89e-17!29;UBERON:0003080!5.61e-17!40;UBERON:0002780!1.99e-16!39;UBERON:0001890!1.99e-16!39;UBERON:0006240!1.99e-16!39;UBERON:0000956!1.02e-12!21;UBERON:0001869!1.02e-12!21;UBERON:0000203!1.02e-12!21;UBERON:0002619!8.83e-11!17;UBERON:0007811!2.66e-10!86;UBERON:0000153!8.54e-09!94;UBERON:0000025!2.64e-08!114;UBERON:0002021!7.14e-08!10;UBERON:0000411!7.14e-08!10;UBERON:0001950!7.14e-08!10;UBERON:0004111!1.91e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.17e-40,73;UBERON:0001016,5.77e-39,75;UBERON:0002020,1.91e-36,34;UBERON:0000073,2.56e-36,54;UBERON:0001049,1.10e-35,52;UBERON:0005068,1.10e-35,52;UBERON:0006241,1.10e-35,52;UBERON:0007135,1.10e-35,52;UBERON:0003528,2.41e-29,29;UBERON:0002791,2.41e-29,29;UBERON:0001893,2.41e-29,29;UBERON:0000955,4.47e-29,47;UBERON:0006238,4.47e-29,47;UBERON:0004121,5.14e-28,95;UBERON:0000924,5.14e-28,95;UBERON:0006601,5.14e-28,95;UBERON:0002616,7.60e-28,46;UBERON:0002346,6.49e-27,64;UBERON:0003075,6.49e-27,64;UBERON:0007284,6.49e-27,64;UBERON:0003080,1.79e-24,40;UBERON:0002780,2.21e-23,39;UBERON:0001890,2.21e-23,39;UBERON:0006240,2.21e-23,39;UBERON:0010371,3.03e-22,73;UBERON:0000956,5.56e-20,21;UBERON:0001869,5.56e-20,21;UBERON:0000203,5.56e-20,21;UBERON:0003056,1.92e-18,49;UBERON:0002619,7.31e-18,17;UBERON:0010314,1.97e-15,92;UBERON:0002021,3.88e-15,10;UBERON:0000411,3.88e-15,10;UBERON:0001950,3.88e-15,10;UBERON:0000025,4.94e-12,114;UBERON:0003076,1.88e-11,12;UBERON:0003057,1.88e-11,12;UBERON:0004111,2.02e-11,122;UBERON:0002420,2.14e-10,8;UBERON:0007245,2.14e-10,8;UBERON:0010009,2.14e-10,8;UBERON:0010011,2.14e-10,8;UBERON:0000454,2.14e-10,8;UBERON:0002240,3.70e-09,6;UBERON:0005174,3.70e-09,6;UBERON:0001137,3.70e-09,6;UBERON:0011216,3.75e-09,194;UBERON:0001948,3.54e-08,5;UBERON:0002315,3.54e-08,5 | |||
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|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.405507724878058,2.20256102594018,3.12956537739216,3.48840250208714,3.51497892375155,4.08302788055995,2.37976916763116,7.18762821824858,0,0,0,0,0.573066879877513,0.515672092277442,2.42779753031517,1.5869729378161,1.90149421051854,3.04960078862219,4.4464739805557,0,0,0,5.39280198933128,10.373894243682,0.933206510776299,1.35005938331691,1.05162480675691,4.85606673486466,3.97563373712904,1.10241719293459,0.383381884072945,0.919218786610021,0,2.68143409978894,2.61131106535614,1.45074916503213,1.28082701043374,2.6045668527838,2.51264699101243,3.37657566019008,3.81995619442025,3.24091444021034,2.98980529678116,1.86399445825301,0.37863096666592,0.906858721281426,0,0,0,0,0,0,0.702222100658759,0.511290967734173,0,0,0.281686839553361,2.56652954828636,2.54805239706646,0,0,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.867426633830679,0,0,0.150722640552623,0.23517741427141,0,0,0,0,1.13236794963186,0.662524555381181,0.484875253135222,0,0,0.41889341362691,0,0,0,0,2.09706895166752,1.83000241127451,1.13088916901578,5.9100268865374,3.58001640262463,1.87009240103604,1.78465389374533,0.407357455401265,0.497627882440372,0,0.210441855886474,0.650602214813519,0.459804208866946,0.540186389416048,0,0.748401490664606,0.512454881139399,0.843315521037559,0.517406741478031,0.215567992932842,0,0,0,0.278047249225598,0,0.61734640922383,0,0,0,0,0,0.469052119962192,0.540186184383045,0.473489471170421,0.393528463494808,0,0.232533944750408,0.268273401399619,0.350296027101508,0,0,0.0810688095458557,0.292399974850665,0,0,2.10289948564127,1.13195073617213,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0.610953983535943,0.193952487167626,0.0701358198903186,0.189709611372772,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0,0,0.318909537314974,0,0.345369963731791,0.144649058581512,0,0,0,0,2.0871576698413,3.04750385139728,0.491804836130026,1.00988370881749,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.891194696329576,0.849229592366497,0.404810701674894,0.292255857911312,0.790575555893047,2.57057053137446,0,0.712262414669021,0,0.659880491890142,0,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0.727067458955011,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0.493647061806363,0,0,0.21183207086382,0,0.65954501176592,0.322928853391811,0.180938774784468,0.358117032009409,0,0,1.8542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0.972255941720238,0.258319646955462,0.337912250981556,0.117357238645754,0.5208175393758,0,0,0,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,3.00943262421218,2.25900737046827,2.30162618253588,4.58316410751517,5.32744865265431,3.42541259885321,3.7769694869485,3.37511250115903,6.75481804836331,1.35942722695261,5.1776031175182,0,0.798049746802062,0.512200817262403,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,1.01078884705519,0,0.188626341386076,0.561849044819294,0.320125762024346,0.746661096422973,0,0.347652977834566,1.35036454324594,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0,0.282328141245992,0.423073039458382,0.365855945745545,0,0.543216455383447,1.12228454331548,0.355905054372522,0.985044823755635,0.409231043169689,0.619747364743864,0.385813221962283,1.24905288968973,0.233931608445408,0,0.382576664137687,0.882365676478062,0.927471342481686 | ||
|short_description=p6@Shisa4 | |short_description=p6@Shisa4 | ||
}} | }} |
Latest revision as of 10:43, 26 September 2015
Short description: | p6@Shisa4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Shisa4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1683 |
Association with transcript: | -22bp_to_ENSMUST00000159181_5end |
EntrezGene: | Shisa4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.69e-19 | 43 |
ectodermal cell | 7.07e-19 | 44 |
neurectodermal cell | 7.07e-19 | 44 |
CNS neuron (sensu Vertebrata) | 1.55e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.55e-18 | 23 |
oligodendrocyte precursor cell | 3.36e-13 | 8 |
embryonic cell | 5.73e-13 | 70 |
neuron | 2.41e-11 | 33 |
neuronal stem cell | 2.41e-11 | 33 |
neuroblast | 2.41e-11 | 33 |
electrically signaling cell | 2.41e-11 | 33 |
electrically responsive cell | 4.51e-11 | 39 |
electrically active cell | 4.51e-11 | 39 |
migratory neural crest cell | 3.56e-10 | 10 |
neuron associated cell | 3.56e-10 | 10 |
glial cell (sensu Vertebrata) | 3.56e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 3.56e-10 | 10 |
glial cell | 3.56e-10 | 10 |
glioblast | 3.56e-10 | 10 |
glioblast (sensu Vertebrata) | 3.56e-10 | 10 |
oligodendrocyte | 5.86e-10 | 6 |
macroglial cell | 5.86e-10 | 6 |
astrocyte | 5.86e-10 | 6 |