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FFCP PHASE1:Mm9::chr1:137271676..137271687,-: Difference between revisions

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(Created page with "{{FFCP |id=chr1:137271676..137271687,- |short_description=p6@Shisa4 |description=CAGE_peak_6_at_Shisa4_5end |association_with_transcript=-22bp_to_ENSMUST00000159181_5end ...")
 
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{{FFCP
{{FFCP
|id=chr1:137271676..137271687,-
|DHSsupport=NA
|short_description=p6@Shisa4
|DPIdataset=NA
|description=CAGE_peak_6_at_Shisa4_5end
|association_with_transcript=-22bp_to_ENSMUST00000159181_5end
|EntrezGene=77552
|EntrezGene=77552
|HGNC=
|HGNC=
|MCL_coexpression_id=1683
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-22bp_to_ENSMUST00000159181_5end
|cluster_id=chr1:137271676..137271687,-
|description=CAGE_peak_6_at_Shisa4_5end
|id=chr1:137271676..137271687,-
|ontology_enrichment_celltype=CL:0002319!3.00e-18!43;CL:0000221!3.73e-18!44;CL:0000133!3.73e-18!44;CL:0000055!4.05e-18!50;CL:0000393!4.67e-13!39;CL:0000211!4.67e-13!39;CL:0000540!2.49e-12!33;CL:0000047!2.49e-12!33;CL:0000031!2.49e-12!33;CL:0000404!2.49e-12!33;CL:0000117!2.07e-11!23;CL:0000337!2.07e-11!23;CL:0002321!1.43e-09!70;CL:0000220!1.43e-09!70;CL:0000333!3.85e-07!10;CL:0000095!3.85e-07!10;CL:0000243!3.85e-07!10;CL:0000123!3.85e-07!10;CL:0000125!3.85e-07!10;CL:0000030!3.85e-07!10;CL:0000339!3.85e-07!10;CL:0002453!5.74e-07!8
|ontology_enrichment_celltype_v019_2=CL:0002319,1.69e-19,43;CL:0000221,7.07e-19,44;CL:0000133,7.07e-19,44;CL:0000117,1.55e-18,23;CL:0000337,1.55e-18,23;CL:0002453,3.36e-13,8;CL:0002321,5.73e-13,70;CL:0000540,2.41e-11,33;CL:0000047,2.41e-11,33;CL:0000031,2.41e-11,33;CL:0000404,2.41e-11,33;CL:0000393,4.51e-11,39;CL:0000211,4.51e-11,39;CL:0000333,3.56e-10,10;CL:0000095,3.56e-10,10;CL:0000243,3.56e-10,10;CL:0000123,3.56e-10,10;CL:0000125,3.56e-10,10;CL:0000030,3.56e-10,10;CL:0000339,3.56e-10,10;CL:0000128,5.86e-10,6;CL:0000126,5.86e-10,6;CL:0000127,5.86e-10,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!7.99e-31!75;UBERON:0001016!7.99e-31!75;UBERON:0001017!3.04e-30!73;UBERON:0005743!3.04e-30!73;UBERON:0004121!6.31e-26!102;UBERON:0000924!6.31e-26!102;UBERON:0006601!6.31e-26!102;UBERON:0001049!1.11e-22!52;UBERON:0005068!1.11e-22!52;UBERON:0006241!1.11e-22!52;UBERON:0007135!1.11e-22!52;UBERON:0002346!1.97e-21!71;UBERON:0003075!1.97e-21!71;UBERON:0007284!1.97e-21!71;UBERON:0002020!1.67e-20!34;UBERON:0000955!9.73e-20!50;UBERON:0006238!9.73e-20!50;UBERON:0000033!3.26e-19!63;UBERON:0002616!4.09e-19!49;UBERON:0003056!7.89e-18!49;UBERON:0002791!3.89e-17!29;UBERON:0003528!3.89e-17!29;UBERON:0001893!3.89e-17!29;UBERON:0003080!5.61e-17!40;UBERON:0002780!1.99e-16!39;UBERON:0001890!1.99e-16!39;UBERON:0006240!1.99e-16!39;UBERON:0000956!1.02e-12!21;UBERON:0001869!1.02e-12!21;UBERON:0000203!1.02e-12!21;UBERON:0002619!8.83e-11!17;UBERON:0007811!2.66e-10!86;UBERON:0000153!8.54e-09!94;UBERON:0000025!2.64e-08!114;UBERON:0002021!7.14e-08!10;UBERON:0000411!7.14e-08!10;UBERON:0001950!7.14e-08!10;UBERON:0004111!1.91e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.17e-40,73;UBERON:0001016,5.77e-39,75;UBERON:0002020,1.91e-36,34;UBERON:0000073,2.56e-36,54;UBERON:0001049,1.10e-35,52;UBERON:0005068,1.10e-35,52;UBERON:0006241,1.10e-35,52;UBERON:0007135,1.10e-35,52;UBERON:0003528,2.41e-29,29;UBERON:0002791,2.41e-29,29;UBERON:0001893,2.41e-29,29;UBERON:0000955,4.47e-29,47;UBERON:0006238,4.47e-29,47;UBERON:0004121,5.14e-28,95;UBERON:0000924,5.14e-28,95;UBERON:0006601,5.14e-28,95;UBERON:0002616,7.60e-28,46;UBERON:0002346,6.49e-27,64;UBERON:0003075,6.49e-27,64;UBERON:0007284,6.49e-27,64;UBERON:0003080,1.79e-24,40;UBERON:0002780,2.21e-23,39;UBERON:0001890,2.21e-23,39;UBERON:0006240,2.21e-23,39;UBERON:0010371,3.03e-22,73;UBERON:0000956,5.56e-20,21;UBERON:0001869,5.56e-20,21;UBERON:0000203,5.56e-20,21;UBERON:0003056,1.92e-18,49;UBERON:0002619,7.31e-18,17;UBERON:0010314,1.97e-15,92;UBERON:0002021,3.88e-15,10;UBERON:0000411,3.88e-15,10;UBERON:0001950,3.88e-15,10;UBERON:0000025,4.94e-12,114;UBERON:0003076,1.88e-11,12;UBERON:0003057,1.88e-11,12;UBERON:0004111,2.02e-11,122;UBERON:0002420,2.14e-10,8;UBERON:0007245,2.14e-10,8;UBERON:0010009,2.14e-10,8;UBERON:0010011,2.14e-10,8;UBERON:0000454,2.14e-10,8;UBERON:0002240,3.70e-09,6;UBERON:0005174,3.70e-09,6;UBERON:0001137,3.70e-09,6;UBERON:0011216,3.75e-09,194;UBERON:0001948,3.54e-08,5;UBERON:0002315,3.54e-08,5
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.405507724878058,2.20256102594018,3.12956537739216,3.48840250208714,3.51497892375155,4.08302788055995,2.37976916763116,7.18762821824858,0,0,0,0,0.573066879877513,0.515672092277442,2.42779753031517,1.5869729378161,1.90149421051854,3.04960078862219,4.4464739805557,0,0,0,5.39280198933128,10.373894243682,0.933206510776299,1.35005938331691,1.05162480675691,4.85606673486466,3.97563373712904,1.10241719293459,0.383381884072945,0.919218786610021,0,2.68143409978894,2.61131106535614,1.45074916503213,1.28082701043374,2.6045668527838,2.51264699101243,3.37657566019008,3.81995619442025,3.24091444021034,2.98980529678116,1.86399445825301,0.37863096666592,0.906858721281426,0,0,0,0,0,0,0.702222100658759,0.511290967734173,0,0,0.281686839553361,2.56652954828636,2.54805239706646,0,0,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.867426633830679,0,0,0.150722640552623,0.23517741427141,0,0,0,0,1.13236794963186,0.662524555381181,0.484875253135222,0,0,0.41889341362691,0,0,0,0,2.09706895166752,1.83000241127451,1.13088916901578,5.9100268865374,3.58001640262463,1.87009240103604,1.78465389374533,0.407357455401265,0.497627882440372,0,0.210441855886474,0.650602214813519,0.459804208866946,0.540186389416048,0,0.748401490664606,0.512454881139399,0.843315521037559,0.517406741478031,0.215567992932842,0,0,0,0.278047249225598,0,0.61734640922383,0,0,0,0,0,0.469052119962192,0.540186184383045,0.473489471170421,0.393528463494808,0,0.232533944750408,0.268273401399619,0.350296027101508,0,0,0.0810688095458557,0.292399974850665,0,0,2.10289948564127,1.13195073617213,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0.610953983535943,0.193952487167626,0.0701358198903186,0.189709611372772,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0,0,0.318909537314974,0,0.345369963731791,0.144649058581512,0,0,0,0,2.0871576698413,3.04750385139728,0.491804836130026,1.00988370881749,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.891194696329576,0.849229592366497,0.404810701674894,0.292255857911312,0.790575555893047,2.57057053137446,0,0.712262414669021,0,0.659880491890142,0,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0.727067458955011,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0.493647061806363,0,0,0.21183207086382,0,0.65954501176592,0.322928853391811,0.180938774784468,0.358117032009409,0,0,1.8542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0.972255941720238,0.258319646955462,0.337912250981556,0.117357238645754,0.5208175393758,0,0,0,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,3.00943262421218,2.25900737046827,2.30162618253588,4.58316410751517,5.32744865265431,3.42541259885321,3.7769694869485,3.37511250115903,6.75481804836331,1.35942722695261,5.1776031175182,0,0.798049746802062,0.512200817262403,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,1.01078884705519,0,0.188626341386076,0.561849044819294,0.320125762024346,0.746661096422973,0,0.347652977834566,1.35036454324594,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0,0.282328141245992,0.423073039458382,0.365855945745545,0,0.543216455383447,1.12228454331548,0.355905054372522,0.985044823755635,0.409231043169689,0.619747364743864,0.385813221962283,1.24905288968973,0.233931608445408,0,0.382576664137687,0.882365676478062,0.927471342481686
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.405507724878058,2.20256102594018,3.12956537739216,3.48840250208714,3.51497892375155,4.08302788055995,2.37976916763116,7.18762821824858,0,0,0,0,0.573066879877513,0.515672092277442,2.42779753031517,1.5869729378161,1.90149421051854,3.04960078862219,4.4464739805557,0,0,0,5.39280198933128,10.373894243682,0.933206510776299,1.35005938331691,1.05162480675691,4.85606673486466,3.97563373712904,1.10241719293459,0.383381884072945,0.919218786610021,0,2.68143409978894,2.61131106535614,1.45074916503213,1.28082701043374,2.6045668527838,2.51264699101243,3.37657566019008,3.81995619442025,3.24091444021034,2.98980529678116,1.86399445825301,0.37863096666592,0.906858721281426,0,0,0,0,0,0,0.702222100658759,0.511290967734173,0,0,0.281686839553361,2.56652954828636,2.54805239706646,0,0,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.867426633830679,0,0,0.150722640552623,0.23517741427141,0,0,0,0,1.13236794963186,0.662524555381181,0.484875253135222,0,0,0.41889341362691,0,0,0,0,2.09706895166752,1.83000241127451,1.13088916901578,5.9100268865374,3.58001640262463,1.87009240103604,1.78465389374533,0.407357455401265,0.497627882440372,0,0.210441855886474,0.650602214813519,0.459804208866946,0.540186389416048,0,0.748401490664606,0.512454881139399,0.843315521037559,0.517406741478031,0.215567992932842,0,0,0,0.278047249225598,0,0.61734640922383,0,0,0,0,0,0.469052119962192,0.540186184383045,0.473489471170421,0.393528463494808,0,0.232533944750408,0.268273401399619,0.350296027101508,0,0,0.0810688095458557,0.292399974850665,0,0,2.10289948564127,1.13195073617213,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0.610953983535943,0.193952487167626,0.0701358198903186,0.189709611372772,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0,0,0.318909537314974,0,0.345369963731791,0.144649058581512,0,0,0,0,2.0871576698413,3.04750385139728,0.491804836130026,1.00988370881749,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.891194696329576,0.849229592366497,0.404810701674894,0.292255857911312,0.790575555893047,2.57057053137446,0,0.712262414669021,0,0.659880491890142,0,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0.727067458955011,0,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0.493647061806363,0,0,0.21183207086382,0,0.65954501176592,0.322928853391811,0.180938774784468,0.358117032009409,0,0,1.8542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0.972255941720238,0.258319646955462,0.337912250981556,0.117357238645754,0.5208175393758,0,0,0,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,3.00943262421218,2.25900737046827,2.30162618253588,4.58316410751517,5.32744865265431,3.42541259885321,3.7769694869485,3.37511250115903,6.75481804836331,1.35942722695261,5.1776031175182,0,0.798049746802062,0.512200817262403,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,1.01078884705519,0,0.188626341386076,0.561849044819294,0.320125762024346,0.746661096422973,0,0.347652977834566,1.35036454324594,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0,0.282328141245992,0.423073039458382,0.365855945745545,0,0.543216455383447,1.12228454331548,0.355905054372522,0.985044823755635,0.409231043169689,0.619747364743864,0.385813221962283,1.24905288968973,0.233931608445408,0,0.382576664137687,0.882365676478062,0.927471342481686
|short_description=p6@Shisa4
}}
}}

Latest revision as of 10:43, 26 September 2015

Short description:p6@Shisa4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Shisa4_5end
Coexpression cluster:MCL_coexpression_mm9:1683
Association with transcript: -22bp_to_ENSMUST00000159181_5end
EntrezGene:Shisa4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Shisa4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.17e-4073
nervous system5.77e-3975
gray matter1.91e-3634
regional part of nervous system2.56e-3654
neural tube1.10e-3552
neural rod1.10e-3552
future spinal cord1.10e-3552
neural keel1.10e-3552
brain grey matter2.41e-2929
regional part of telencephalon2.41e-2929
telencephalon2.41e-2929
brain4.47e-2947
future brain4.47e-2947
ectoderm-derived structure5.14e-2895
ectoderm5.14e-2895
presumptive ectoderm5.14e-2895
regional part of brain7.60e-2846
neurectoderm6.49e-2764
neural plate6.49e-2764
presumptive neural plate6.49e-2764
anterior neural tube1.79e-2440
regional part of forebrain2.21e-2339
forebrain2.21e-2339
future forebrain2.21e-2339
ecto-epithelium3.03e-2273
cerebral cortex5.56e-2021
cerebral hemisphere5.56e-2021
pallium5.56e-2021
pre-chordal neural plate1.92e-1849
regional part of cerebral cortex7.31e-1817
structure with developmental contribution from neural crest1.97e-1592
occipital lobe3.88e-1510
visual cortex3.88e-1510
neocortex3.88e-1510
tube4.94e-12114
posterior neural tube1.88e-1112
chordal neural plate1.88e-1112
anatomical conduit2.02e-11122
basal ganglion2.14e-108
nuclear complex of neuraxis2.14e-108
aggregate regional part of brain2.14e-108
collection of basal ganglia2.14e-108
cerebral subcortex2.14e-108
spinal cord3.70e-096
dorsal region element3.70e-096
dorsum3.70e-096
organ system subdivision3.75e-09194
regional part of spinal cord3.54e-085
gray matter of spinal cord3.54e-085
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