FFCP PHASE1:Mm9::chr1:137269776..137269787,-: Difference between revisions
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|id=chr1:137269776..137269787,-
|short_description=p13@Shisa4
|description=CAGE_peak_13_at_Shisa4_5end
|association_with_transcript=239bp_to_ENSMUST00000159918_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=77552 | |EntrezGene=77552 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=239bp_to_ENSMUST00000159918_5end | |||
|cluster_id=chr1:137269776..137269787,- | |||
|description=CAGE_peak_13_at_Shisa4_5end | |||
|id=chr1:137269776..137269787,- | |||
|ontology_enrichment_celltype=CL:0002319!6.54e-07!43 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.23e-18!9;UBERON:0000019!1.23e-18!9;UBERON:0000047!1.23e-18!9;UBERON:0004088!1.23e-18!9;UBERON:0002104!1.23e-18!9;UBERON:0001456!1.23e-18!9;UBERON:0003072!1.23e-18!9;UBERON:0003071!1.23e-18!9;UBERON:0004128!1.23e-18!9;UBERON:0003056!1.62e-18!49;UBERON:0002346!5.14e-17!71;UBERON:0003075!5.14e-17!71;UBERON:0007284!5.14e-17!71;UBERON:0000033!2.43e-16!63;UBERON:0004121!3.94e-16!102;UBERON:0000924!3.94e-16!102;UBERON:0006601!3.94e-16!102;UBERON:0001444!5.69e-15!11;UBERON:0000020!1.34e-13!12;UBERON:0001032!1.34e-13!12;UBERON:0004456!1.34e-13!12;UBERON:0005085!1.95e-12!13;UBERON:0002020!2.41e-11!34;UBERON:0007811!1.53e-10!86;UBERON:0001017!4.27e-10!73;UBERON:0005743!4.27e-10!73;UBERON:0002791!6.35e-10!29;UBERON:0003528!6.35e-10!29;UBERON:0001893!6.35e-10!29;UBERON:0000073!1.06e-09!75;UBERON:0001016!1.06e-09!75;UBERON:0000153!3.38e-09!94;UBERON:0001049!1.29e-08!52;UBERON:0005068!1.29e-08!52;UBERON:0006241!1.29e-08!52;UBERON:0007135!1.29e-08!52;UBERON:0002616!5.83e-08!49;UBERON:0002780!5.91e-08!39;UBERON:0001890!5.91e-08!39;UBERON:0006240!5.91e-08!39;UBERON:0002420!8.43e-08!8;UBERON:0007245!8.43e-08!8;UBERON:0010009!8.43e-08!8;UBERON:0010011!8.43e-08!8;UBERON:0000454!8.43e-08!8;UBERON:0000955!9.74e-08!50;UBERON:0006238!9.74e-08!50;UBERON:0003080!1.09e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.33e-35,9;UBERON:0000019,4.33e-35,9;UBERON:0000047,4.33e-35,9;UBERON:0010312,4.33e-35,9;UBERON:0004088,4.33e-35,9;UBERON:0002104,4.33e-35,9;UBERON:0001456,4.33e-35,9;UBERON:0003072,4.33e-35,9;UBERON:0004128,4.33e-35,9;UBERON:0003071,4.33e-35,9;UBERON:0001444,8.23e-29,11;UBERON:0000020,1.87e-26,12;UBERON:0001032,1.87e-26,12;UBERON:0004456,1.87e-26,12;UBERON:0000033,1.86e-24,13;UBERON:0005085,1.86e-24,13;UBERON:0003056,2.07e-09,49;UBERON:0007811,4.62e-09,36;UBERON:0000153,1.26e-07,43;UBERON:0002346,3.12e-07,64;UBERON:0003075,3.12e-07,64;UBERON:0007284,3.12e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.58328969722285,0,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0,0.52091337055676,0,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.251308704225729,0.347648640384553,0,0,0.162241263067758,0,0,0,3.57751155007006,0,0.229902104433473,0.720248519221397,0.60281927134286,1.2246569847239,2.0498195245576,3.65436725782942,9.05461797586555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,1.03552062350364,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.58328969722285,0,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0,0.52091337055676,0,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.251308704225729,0.347648640384553,0,0,0.162241263067758,0,0,0,3.57751155007006,0,0.229902104433473,0.720248519221397,0.60281927134286,1.2246569847239,2.0498195245576,3.65436725782942,9.05461797586555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,1.03552062350364,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p13@Shisa4 | |||
}} | }} |
Latest revision as of 10:40, 26 September 2015
Short description: | p13@Shisa4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Shisa4_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 239bp_to_ENSMUST00000159918_5end |
EntrezGene: | Shisa4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.33e-35 | 9 |
camera-type eye | 4.33e-35 | 9 |
simple eye | 4.33e-35 | 9 |
immature eye | 4.33e-35 | 9 |
ocular region | 4.33e-35 | 9 |
visual system | 4.33e-35 | 9 |
face | 4.33e-35 | 9 |
optic cup | 4.33e-35 | 9 |
optic vesicle | 4.33e-35 | 9 |
eye primordium | 4.33e-35 | 9 |
subdivision of head | 8.23e-29 | 11 |
sense organ | 1.87e-26 | 12 |
sensory system | 1.87e-26 | 12 |
entire sense organ system | 1.87e-26 | 12 |
head | 1.86e-24 | 13 |
ectodermal placode | 1.86e-24 | 13 |
pre-chordal neural plate | 2.07e-09 | 49 |
craniocervical region | 4.62e-09 | 36 |
anterior region of body | 1.26e-07 | 43 |
neurectoderm | 3.12e-07 | 64 |
neural plate | 3.12e-07 | 64 |
presumptive neural plate | 3.12e-07 | 64 |