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FFCP PHASE1:Mm9::chr4:131394152..131394206,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:131394152..131394206,-
|DHSsupport=NA
|short_description=p1@Ptpru
|DPIdataset=NA
|description=CAGE_peak_1_at_Ptpru_5end
|association_with_transcript=0bp_to_ENSMUST00000105987,ENSMUST00000127633,NM_001083119,NM_011214,uc008vaa.1,uc008vab.1,uc008vac.1_5end
|EntrezGene=19273
|EntrezGene=19273
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=B1AUH1,Q3V360,Q80ZN2
|UniProt=B1AUH1,Q3V360,Q80ZN2
|association_with_transcript=0bp_to_ENSMUST00000105987,ENSMUST00000127633,NM_001083119,NM_011214,uc008vaa.1,uc008vab.1,uc008vac.1_5end
|cluster_id=chr4:131394152..131394206,-
|description=CAGE_peak_1_at_Ptpru_5end
|id=chr4:131394152..131394206,-
|ontology_enrichment_celltype=CL:0000117!2.58e-08!23;CL:0000337!2.58e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-08,23;CL:0000337,1.26e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.09e-25!71;UBERON:0003075!2.09e-25!71;UBERON:0007284!2.09e-25!71;UBERON:0000033!3.09e-25!63;UBERON:0004121!7.94e-22!102;UBERON:0000924!7.94e-22!102;UBERON:0006601!7.94e-22!102;UBERON:0003056!1.09e-21!49;UBERON:0000955!4.64e-19!50;UBERON:0006238!4.64e-19!50;UBERON:0002616!5.61e-19!49;UBERON:0001049!6.47e-19!52;UBERON:0005068!6.47e-19!52;UBERON:0006241!6.47e-19!52;UBERON:0007135!6.47e-19!52;UBERON:0001017!1.45e-16!73;UBERON:0005743!1.45e-16!73;UBERON:0003080!5.68e-16!40;UBERON:0002780!1.86e-15!39;UBERON:0001890!1.86e-15!39;UBERON:0006240!1.86e-15!39;UBERON:0000073!2.01e-15!75;UBERON:0001016!2.01e-15!75;UBERON:0002020!3.80e-11!34;UBERON:0002791!3.78e-10!29;UBERON:0003528!3.78e-10!29;UBERON:0001893!3.78e-10!29;UBERON:0000475!8.79e-10!200;UBERON:0000468!1.40e-09!333;UBERON:0000153!1.50e-09!94;UBERON:0004111!1.84e-09!122;UBERON:0007811!3.96e-09!86;UBERON:0000025!3.61e-08!114;UBERON:0000922!5.51e-08!328;UBERON:0000956!8.55e-08!21;UBERON:0001869!8.55e-08!21;UBERON:0000203!8.55e-08!21;UBERON:0000020!2.01e-07!12;UBERON:0001032!2.01e-07!12;UBERON:0004456!2.01e-07!12;UBERON:0000970!9.15e-07!9;UBERON:0000019!9.15e-07!9;UBERON:0000047!9.15e-07!9;UBERON:0004088!9.15e-07!9;UBERON:0002104!9.15e-07!9;UBERON:0001456!9.15e-07!9;UBERON:0003072!9.15e-07!9;UBERON:0003071!9.15e-07!9;UBERON:0004128!9.15e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.23e-24,64;UBERON:0003075,1.23e-24,64;UBERON:0007284,1.23e-24,64;UBERON:0010371,9.61e-24,73;UBERON:0003056,1.28e-22,49;UBERON:0000073,5.85e-21,54;UBERON:0004121,5.22e-20,95;UBERON:0000924,5.22e-20,95;UBERON:0006601,5.22e-20,95;UBERON:0001049,1.02e-19,52;UBERON:0005068,1.02e-19,52;UBERON:0006241,1.02e-19,52;UBERON:0007135,1.02e-19,52;UBERON:0000955,1.95e-18,47;UBERON:0006238,1.95e-18,47;UBERON:0002616,2.37e-18,46;UBERON:0010314,2.55e-17,92;UBERON:0001017,4.43e-17,73;UBERON:0003080,1.23e-16,40;UBERON:0002780,4.24e-16,39;UBERON:0001890,4.24e-16,39;UBERON:0006240,4.24e-16,39;UBERON:0001016,9.87e-16,75;UBERON:0002020,1.37e-11,34;UBERON:0003528,1.52e-10,29;UBERON:0002791,1.52e-10,29;UBERON:0001893,1.52e-10,29;UBERON:0004111,2.37e-08,122;UBERON:0000956,4.40e-08,21;UBERON:0001869,4.40e-08,21;UBERON:0000203,4.40e-08,21;UBERON:0000020,1.08e-07,12;UBERON:0001032,1.08e-07,12;UBERON:0004456,1.08e-07,12;UBERON:0000922,2.86e-07,320;UBERON:0000025,3.37e-07,114;UBERON:0000970,5.24e-07,9;UBERON:0000019,5.24e-07,9;UBERON:0000047,5.24e-07,9;UBERON:0010312,5.24e-07,9;UBERON:0004088,5.24e-07,9;UBERON:0002104,5.24e-07,9;UBERON:0001456,5.24e-07,9;UBERON:0003072,5.24e-07,9;UBERON:0004128,5.24e-07,9;UBERON:0003071,5.24e-07,9;UBERON:0000489,6.95e-07,21;UBERON:0001894,7.22e-07,10;UBERON:0006222,7.22e-07,10;UBERON:0001008,9.77e-07,19
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|phase1_expression=18.2569685699465,0,0,0,0,0.33575854382378,0.700837921786577,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,8.92954546586233,0.0992909512008853,0,0.319984845586813,0,0,0,0,0,0.504060259519861,0.443461021310609,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0.523523743973798,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,14.8654355426127,1.30815093828268,3.07560655828261,4.86074747685709,2.65974201088189,0,0,0.725362142011344,0.336093799142464,0.257259436035947,0.85960031981627,0.515672092277442,11.9366711907163,7.40587370980846,13.9442908771359,1.0165335962074,0.889294796111139,0,0,0.7104801149461,2.09720077362883,1.92109152660777,19.4936471139938,17.010748229793,12.6194976810829,11.1403883917483,5.30084498283872,8.32937434661688,8.72193786265951,7.35375029288017,14.3150645299205,12.257984456178,13.6709814598057,6.85808696197008,8.14240028061446,11.4600941522487,16.1926139420801,12.9435400307286,18.0301932376636,9.72274332063103,7.97281412474976,7.64237727883732,0.227178579999552,0.604572480854284,23.1891590961342,0.860423876981386,0,0.539703191637817,0,0.448026887097336,0.842666520790511,0,0,0,23.2391642631523,0,0,0,2.38140145112336,1.77351905832569,1.51657333504435,1.7127581957859,0,23.3054158331775,4.3371331691534,5.78484408793068,8.30215790121811,5.27529241934179,10.2302175208063,11.8126595849895,8.15743393523434,3.61498392299779,0.884610551949874,2.26473589926373,0.441683036920787,3.39412677194655,0,10.8328894894272,9.63454851341893,2.55457055208591,0.359445373517761,0.599902730993408,0.254140454146129,15.1288545798871,7.77751024791665,7.79056983099759,13.5582969749976,13.0414883238469,11.8439185398949,14.7639549391659,2.85150218780886,4.35424397135326,3.53811861807145,7.57590681191306,37.2144466873333,36.3245325004887,46.9962158791961,45.5128549863859,60.9607032395898,30.2348379872245,24.3624483855295,19.4027528054262,6.03590380211958,6.99692496620931,9.85326295318113,7.89104636739269,6.39508673218875,3.1342694986995,3.90986059175093,2.7864797354589,1.40442637462647,1.54408744268829,3.12579849335152,1.44988040774851,1.40715635988658,1.2604344302271,0.946978942340841,0.590292695242212,0.925602677324269,0.697601834251224,1.07309360559848,0.817357396570186,0.493679549740441,0.656669856316381,1.86458261955468,1.16959989940266,1.09775057645525,3.48936688776967,18.2952255250791,8.74689205223918,0.330418782983798,1.85115396664481,4.69234151177515,3.94802342162745,3.35055399437443,1.00841762311671,1.33426826306922,0.951128130562796,0.949058123089023,3.62337700392824,1.00534083520108,1.79060824837036,2.33956904542944,0,0.864552199498777,2.78797782556114,10.4317345524195,9.02563249616858,19.1603150644237,16.9030602111611,19.9771061782655,17.7443624322506,17.453284246295,13.1373031701846,13.815888050041,16.5352199655213,0.592905254174298,0.83422552858047,1.96558995113203,2.69834534861824,2.23146133527353,1.92941727801933,2.03700681425136,1.43848068725405,2.91843408195064,0,0,0.744281895337007,0.312037673114561,0.252578877947112,0,0.482443521363367,17.3667998756608,4.54779388249163,3.91115943460862,4.92260748748046,8.68353918667458,12.5629693081362,10.2358765580986,13.8544889979037,8.6699329258405,8.858587585951,10.6834695000516,11.9620219742489,8.11619414769709,15.9113964439663,0,0,0.491764273019036,1.65562047782839,14.9312048688647,14.0654023910644,0.163934945376675,1.51482556322624,3.47059041357882,1.56175497718655,1.07711698866399,0.238968797952552,0.668396022247182,0.566153061577665,2.02405350837447,1.75353514746787,1.58115111178609,6.10510501201433,6.10342366395555,5.87616492101942,4.0721739838394,14.1874305756381,2.65490276679926,2.42780636154981,1.209294227859,0.565815239267694,2.36241514304618,1.53717573971964,1.29214146584111,1.81766864738753,2.85197902707777,4.74055136903724,1.05418608574999,0,11.5749465956288,33.1312413017611,36.0910727753885,27.863814554107,19.3300854670078,19.2638323010236,14.8094118541909,27.0973804711993,7.04015124191131,30.0801540626625,2.20528398054962,4.45192882941996,3.06782410722221,2.35220407219808,2.38744688006273,3.93938159388147,1.7488850197791,7.78786268444141,0.341741761595705,3.714963623338,2.59272338317596,0.565105371014073,0,0,0.339956859987711,0.839708713941948,0.829199842826543,5.72802370809068,5.06137589729817,5.28630614529807,3.99619761040665,5.01811910434725,5.24070152990826,4.04593039154462,4.3806331534428,4.97336289769656,2.85152941241944,0.621339313086926,0.56369293868419,0.448549638131936,0.66183396182839,0.194451188344048,0.387479470433193,0,0.234714477291508,0.39061315453185,0.734015410979976,0.241584120826006,0.576060012515731,0.316011120628178,1.21635129174099,0.821687657318618,0.649604114888975,0.358053391334963,0,0.240390899039938,0.147689527174577,0.201932899896295,0,0.100826185136841,0.292373642219257,0.288635524920988,0,2.72076460338254,0.665957860122194,0.179427713218951,0.839423081820392,34.3877477377299,3.75364950902364,30.403169628366,32.7983619990971,2.50786052017682,12.9892923801925,13.3494318587081,17.7597609166213,14.6075204992134,10.2762377965596,12.8416962556249,13.5004500046361,8.55610286126019,13.5942722695261,8.28416498802912,3.21740777510948,10.7736715818278,8.19521307619844,6.80698807791223,4.61148957781561,4.41224420280034,8.66762238426299,6.18105171716683,3.20919209591815,4.54854981174835,4.81610669791456,4.90428487603798,6.64854703036165,7.04276676453562,6.20303064720623,5.23923060411381,6.37363792696705,5.20854895252004,6.59337441285291,6.03515572551029,2.05721551431249,6.92155644021416,6.43777712857767,5.37781741539616,5.17601592284318,6.68455402344244,6.95126296916536,5.26139422875686,5.97538100921792,7.85599180320834,5.45721083371201,7.19082721341613,5.32000356120596,5.57772628269478,9.06661071611365,12.4905288968973,5.84829021113521,5.37177635120746,1.72159498861959,2.64709702943419,1.39120701372253
|short_description=p1@Ptpru
}}
}}

Latest revision as of 10:28, 26 September 2015

Short description:p1@Ptpru
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ptpru_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000105987, ENSMUST00000127633, NM_001083119, NM_011214, uc008vaa.1, uc008vab.1, uc008vac.1_5end
EntrezGene:Ptpru
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ptpru

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.87
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C311.94
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.01
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G323.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G623.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D723.31
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I18.30
adrenal gland, embryo E18.CNhs11026.1262-18F55.28
adrenal gland, neonate N00.CNhs11191.1311-23C110.23
adrenal gland, neonate N25.CNhs11223.1377-27I311.81
amnion, adult pregnant day17.5.CNhs10488.583-22A88.16
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.83
cerebellum, neonate N30.CNhs11135.1395-42I29.63
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A415.13
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F17.79
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F213.04
diencephalon, adult.CNhs10482.20-12F211.84
diencephalon, neonate N30.CNhs11201.1388-42B214.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.35
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C637.21
eyeball, embryo E14.CNhs10521.399-16E236.32
eyeball, embryo E15.CNhs10593.426-16C947.00
eyeball, embryo E17.CNhs11023.1261-18D445.51
eyeball, neonate N00.CNhs11207.633-15C660.96
eyeball, neonate N01.CNhs11140.1532-43E730.23
eyeball, neonate N02.CNhs11205.1551-44G824.36
eyeball, neonate N16.CNhs11188.777-19A219.40
forelimb, embryo E11.CNhs10596.335-25E26.04
forelimb, embryo E12.CNhs10600.359-14H27.00
forelimb, embryo E13.CNhs10589.384-1E29.85
forelimb, embryo E14.CNhs10577.413-26A87.89
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E818.30
hippocampus, neonate N00.CNhs11228.627-43G18.75
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I910.43
kidney, embryo E15.CNhs10997.434-16F89.03
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I216.90
kidney, embryo E18.CNhs11001.1288-20C719.98
kidney, neonate N00.CNhs11214.646-21G717.74
kidney, neonate N10.CNhs11206.758-6D517.45
kidney, neonate N20.CNhs11113.832-19I113.14
kidney, neonate N25.CNhs11122.1353-25F313.82
kidney, neonate N30.CNhs11203.1385-42H116.54
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B117.37
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B68.68
lung, embryo E17.CNhs10605.480-44A612.56
lung, embryo E18.CNhs10583.1287-20I610.24
lung, neonate N00.CNhs11224.640-42C613.85
lung, neonate N06.CNhs11212.683-20E58.67
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E610.68
lung, neonate N20.CNhs11109.822-18A411.96
lung, neonate N25.CNhs11119.1359-25C78.12
lung, neonate N30.CNhs11133.1394-42H215.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C214.93
medulla oblongata, neonate N30.CNhs11200.1396-42A314.07
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I76.10
ovary, embryo E18.CNhs11040.505-44H75.88
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G614.19
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G811.57
pituitary gland, embryo E12.CNhs11018.346-16E633.13
pituitary gland, embryo E13.CNhs11009.370-44C736.09
pituitary gland, embryo E14.CNhs11037.398-44A527.86
pituitary gland, embryo E15.CNhs10592.427-16B919.33
pituitary gland, embryo E16.CNhs11036.449-43F619.26
pituitary gland, embryo E17.CNhs11039.1265-44F514.81
pituitary gland, neonate N00.CNhs11190.1308-22E927.10
placenta, adult pregnant day10.CNhs10472.539-13I77.04
placenta, adult pregnant day17.CNhs10464.577-18G330.08
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C34.45
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H32.35
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D44.00
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B84.05
stomach, neonate N07.CNhs11210.718-18A94.38
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E434.39
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E530.40
vagina, adult.CNhs10502.89-27D532.80
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I83.22
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.38
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.18
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.19
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F99.07
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.26e-0823
neuroblast (sensu Vertebrata)1.26e-0823

Uber anatomy
Ontology termp-valuen
neurectoderm1.23e-2464
neural plate1.23e-2464
presumptive neural plate1.23e-2464
ecto-epithelium9.61e-2473
pre-chordal neural plate1.28e-2249
regional part of nervous system5.85e-2154
ectoderm-derived structure5.22e-2095
ectoderm5.22e-2095
presumptive ectoderm5.22e-2095
neural tube1.02e-1952
neural rod1.02e-1952
future spinal cord1.02e-1952
neural keel1.02e-1952
brain1.95e-1847
future brain1.95e-1847
regional part of brain2.37e-1846
structure with developmental contribution from neural crest2.55e-1792
central nervous system4.43e-1773
anterior neural tube1.23e-1640
regional part of forebrain4.24e-1639
forebrain4.24e-1639
future forebrain4.24e-1639
nervous system9.87e-1675
gray matter1.37e-1134
brain grey matter1.52e-1029
regional part of telencephalon1.52e-1029
telencephalon1.52e-1029
anatomical conduit2.37e-08122
cerebral cortex4.40e-0821
cerebral hemisphere4.40e-0821
pallium4.40e-0821
sense organ1.08e-0712
sensory system1.08e-0712
entire sense organ system1.08e-0712
embryo2.86e-07320
tube3.37e-07114
eye5.24e-079
camera-type eye5.24e-079
simple eye5.24e-079
immature eye5.24e-079
ocular region5.24e-079
visual system5.24e-079
face5.24e-079
optic cup5.24e-079
optic vesicle5.24e-079
eye primordium5.24e-079
cavitated compound organ6.95e-0721
diencephalon7.22e-0710
future diencephalon7.22e-0710
renal system9.77e-0719
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