FFCP PHASE1:Mm9::chr1:136700292..136700303,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=329251 | |EntrezGene=329251 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=132 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_015606_5end | |association_with_transcript=0bp_to_NR_015606_5end | ||
|cluster_id=chr1:136700292..136700303,- | |||
|description=CAGE_peak_4_at_Ppp1r12b_5end | |description=CAGE_peak_4_at_Ppp1r12b_5end | ||
|id=chr1:136700292..136700303,- | |id=chr1:136700292..136700303,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000945!2.27e-08!16;UBERON:0010039!2.27e-08!16;UBERON:0005409!1.69e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.93e-16,47;UBERON:0000945,1.88e-10,16;UBERON:0010039,1.88e-10,16;UBERON:0004921,6.16e-09,114;UBERON:0001007,1.50e-08,116;UBERON:0001555,1.50e-08,116;UBERON:0007026,1.50e-08,116;UBERON:0004119,3.52e-08,118;UBERON:0000925,3.52e-08,118;UBERON:0006595,3.52e-08,118;UBERON:0000160,1.69e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33109761815663,2.02475267389826,1.39912375625629,0.788655413395594,1.64537320326887,0.84877930359606,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0.7813353445238,0.523523743973798,0,0,0,2.14024590558481,0.811015449756117,5.32285581268876,1.56478268869608,0,0.219686182734472,0,0.419959264876088,0,0,0,0,4.11615097657515,1.14613375975503,1.54701627683233,0,0,0,0.338844532069132,1.77858959222228,0.449949858640699,0,2.8419204597844,0.898800331555214,1.53687322128622,0,0,0.210324961351382,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0.151143120213571,1.73918693221007,1.72084775396277,0,0,0,0,0.842666520790511,0.852151612890289,0.779358013808606,0.70667914902068,0,0,0,0,0.432982082022428,1.52015919285059,0,0.45673551887624,1.8125651855302,0.445326417194474,0,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0.988779870937496,5.92857363371638,4.42305275974937,1.29413479957927,1.76673214768315,2.90925151881133,1.86391761218122,0,0,2.29911349687732,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0,0.305518091550949,2.73695335342205,1.0108910337347,0.420883711772948,1.95180664444056,2.29902104433473,0.540186389416048,0.753524089178575,0.476255494059295,0.2562274405697,0.187403449119458,1.81092359517311,0,0,0.175951124163949,0,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0.710234206755631,0.393528463494808,0.462801338662135,0.465067889500816,0.268273401399619,0.817357396570186,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.671032093801859,0,0.102904612379284,0,3.17340679996253,2.34617075588757,4.64473343720877,3.09281907173024,3.22693639397348,3.11329261382818,5.1360919050391,2.37264530772256,3.95277491337626,3.77002813200404,3.58121649674071,4.28920991662064,2.69645822596266,5.40345124686736,3.98282546508734,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.379419222745544,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0,0,0.25462585178142,0,0.810676133875177,0,1.43768206527355,1.48856379067401,0.312037673114561,0,0.538192240565737,0,2.58654466233247,0,1.30371981153621,0.509235257325564,0.704070744865506,0.670025029767263,0.714130922658041,0.585400943573396,2.52216230569906,3.10050565508285,1.11618338060241,2.45794972073607,2.41758974612254,3.18227928879325,3.01582567878545,5.4390568381871,0.491764273019036,0,0,0,0.163934945376675,1.51482556322624,0.631016438832513,0.780877488593277,0,0,0,0,0.404810701674894,0.292255857911312,0,0,3.97432238583152,0.178065603667255,0.488660878060728,4.45419332025846,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0.614870295887855,1.03371317267288,0,0.356497378384721,1.58018378967908,1.05418608574999,1.03135543248187,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0,0,0,0.42366414172764,2.20528398054962,0,0.484393280087717,0.180938774784468,0.477489376012546,0.492422699235184,3.20628920292836,0,4.78438466233988,0.412773735926445,0.555583582109135,2.82552685507037,2.1871076435364,3.88922894451088,0.169978429993855,0,0,2.86401185404534,0.474503990371703,2.64315307264903,3.56417624711944,3.76358932826044,5.02233896616208,5.25970950900801,5.95104881222419,6.28214260761671,7.77689839750757,1.24267862617385,0,0.149516546043979,0,0.583353565032143,0.516639293910924,0.844780627453891,0.704143431874524,1.17183946359555,0.943734099831398,0.724752362478018,0.288030006257865,0.632022241256357,0,0.205421914329655,0,0,0,0.360586348559907,0,0.302899349844443,0.381034033274999,0.100826185136841,0.38983152295901,0.192423683280659,0.935015217452552,0.906921534460845,0,0,0,39.9902459646634,7.69498149349846,5.12824547948342,2.57242054894879,3.51100472824754,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0.682934423016537,0.486213434136588,0.209613162627982,0.367687016900028,1.11123363900808,0.206035057238894,1.60459604795908,1.51618327058278,0.50695859978048,0.188626341386076,0.37456602987953,0.576226371643824,0.746661096422973,0.476293691283074,0.811190281613988,1.15745532278223,0,0.588795680537589,1.02860775715625,0.177475806159338,0.953744759789284,0.726732083161643,0.564656282491984,0.676916863133412,0.365855945745545,0.526139422875686,1.08643291076689,1.12228454331548,0.355905054372522,0.492522411877817,2.45538625901814,0.464810523557898,0.964533054905707,0.749431733813838,0.935726433781634,1.07435527024149,0.956441660344217,0.882365676478062,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33109761815663,2.02475267389826,1.39912375625629,0.788655413395594,1.64537320326887,0.84877930359606,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0.7813353445238,0.523523743973798,0,0,0,2.14024590558481,0.811015449756117,5.32285581268876,1.56478268869608,0,0.219686182734472,0,0.419959264876088,0,0,0,0,4.11615097657515,1.14613375975503,1.54701627683233,0,0,0,0.338844532069132,1.77858959222228,0.449949858640699,0,2.8419204597844,0.898800331555214,1.53687322128622,0,0,0.210324961351382,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0.151143120213571,1.73918693221007,1.72084775396277,0,0,0,0,0.842666520790511,0.852151612890289,0.779358013808606,0.70667914902068,0,0,0,0,0.432982082022428,1.52015919285059,0,0.45673551887624,1.8125651855302,0.445326417194474,0,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0.988779870937496,5.92857363371638,4.42305275974937,1.29413479957927,1.76673214768315,2.90925151881133,1.86391761218122,0,0,2.29911349687732,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0,0.305518091550949,2.73695335342205,1.0108910337347,0.420883711772948,1.95180664444056,2.29902104433473,0.540186389416048,0.753524089178575,0.476255494059295,0.2562274405697,0.187403449119458,1.81092359517311,0,0,0.175951124163949,0,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0.710234206755631,0.393528463494808,0.462801338662135,0.465067889500816,0.268273401399619,0.817357396570186,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.671032093801859,0,0.102904612379284,0,3.17340679996253,2.34617075588757,4.64473343720877,3.09281907173024,3.22693639397348,3.11329261382818,5.1360919050391,2.37264530772256,3.95277491337626,3.77002813200404,3.58121649674071,4.28920991662064,2.69645822596266,5.40345124686736,3.98282546508734,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.379419222745544,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0,0,0.25462585178142,0,0.810676133875177,0,1.43768206527355,1.48856379067401,0.312037673114561,0,0.538192240565737,0,2.58654466233247,0,1.30371981153621,0.509235257325564,0.704070744865506,0.670025029767263,0.714130922658041,0.585400943573396,2.52216230569906,3.10050565508285,1.11618338060241,2.45794972073607,2.41758974612254,3.18227928879325,3.01582567878545,5.4390568381871,0.491764273019036,0,0,0,0.163934945376675,1.51482556322624,0.631016438832513,0.780877488593277,0,0,0,0,0.404810701674894,0.292255857911312,0,0,3.97432238583152,0.178065603667255,0.488660878060728,4.45419332025846,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0.614870295887855,1.03371317267288,0,0.356497378384721,1.58018378967908,1.05418608574999,1.03135543248187,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0,0,0,0.42366414172764,2.20528398054962,0,0.484393280087717,0.180938774784468,0.477489376012546,0.492422699235184,3.20628920292836,0,4.78438466233988,0.412773735926445,0.555583582109135,2.82552685507037,2.1871076435364,3.88922894451088,0.169978429993855,0,0,2.86401185404534,0.474503990371703,2.64315307264903,3.56417624711944,3.76358932826044,5.02233896616208,5.25970950900801,5.95104881222419,6.28214260761671,7.77689839750757,1.24267862617385,0,0.149516546043979,0,0.583353565032143,0.516639293910924,0.844780627453891,0.704143431874524,1.17183946359555,0.943734099831398,0.724752362478018,0.288030006257865,0.632022241256357,0,0.205421914329655,0,0,0,0.360586348559907,0,0.302899349844443,0.381034033274999,0.100826185136841,0.38983152295901,0.192423683280659,0.935015217452552,0.906921534460845,0,0,0,39.9902459646634,7.69498149349846,5.12824547948342,2.57242054894879,3.51100472824754,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0.682934423016537,0.486213434136588,0.209613162627982,0.367687016900028,1.11123363900808,0.206035057238894,1.60459604795908,1.51618327058278,0.50695859978048,0.188626341386076,0.37456602987953,0.576226371643824,0.746661096422973,0.476293691283074,0.811190281613988,1.15745532278223,0,0.588795680537589,1.02860775715625,0.177475806159338,0.953744759789284,0.726732083161643,0.564656282491984,0.676916863133412,0.365855945745545,0.526139422875686,1.08643291076689,1.12228454331548,0.355905054372522,0.492522411877817,2.45538625901814,0.464810523557898,0.964533054905707,0.749431733813838,0.935726433781634,1.07435527024149,0.956441660344217,0.882365676478062,0.927471342481686 | ||
|short_description=p4@Ppp1r12b | |short_description=p4@Ppp1r12b | ||
}} | }} |
Latest revision as of 10:23, 26 September 2015
Short description: | p4@Ppp1r12b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ppp1r12b_5end |
Coexpression cluster: | MCL_coexpression_mm9:132 |
Association with transcript: | 0bp_to_NR_015606_5end |
EntrezGene: | Ppp1r12b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.93e-16 | 47 |
stomach | 1.88e-10 | 16 |
food storage organ | 1.88e-10 | 16 |
subdivision of digestive tract | 6.16e-09 | 114 |
digestive system | 1.50e-08 | 116 |
digestive tract | 1.50e-08 | 116 |
primitive gut | 1.50e-08 | 116 |
endoderm-derived structure | 3.52e-08 | 118 |
endoderm | 3.52e-08 | 118 |
presumptive endoderm | 3.52e-08 | 118 |
intestine | 1.69e-07 | 31 |