FFCP PHASE1:Mm9::chr10:79613728..79613745,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=59090 | |EntrezGene=59090 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D3Z7H2 | |UniProt=D3Z7H2 | ||
|association_with_transcript=-153bp_to_ENSMUST00000146516_5end | |||
|cluster_id=chr10:79613728..79613745,+ | |||
|description=CAGE_peak_11_at_Midn_5end | |||
|id=chr10:79613728..79613745,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.21e-08!33;CL:0000047!7.21e-08!33;CL:0000031!7.21e-08!33;CL:0000404!7.21e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,6.24e-10,6;CL:0000117,2.72e-07,23;CL:0000337,2.72e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.93e-13,49;UBERON:0002346,3.46e-10,64;UBERON:0003075,3.46e-10,64;UBERON:0007284,3.46e-10,64;UBERON:0000970,9.56e-10,9;UBERON:0000019,9.56e-10,9;UBERON:0000047,9.56e-10,9;UBERON:0010312,9.56e-10,9;UBERON:0004088,9.56e-10,9;UBERON:0002104,9.56e-10,9;UBERON:0001456,9.56e-10,9;UBERON:0003072,9.56e-10,9;UBERON:0004128,9.56e-10,9;UBERON:0003071,9.56e-10,9;UBERON:0010314,1.03e-09,92;UBERON:0000020,1.32e-09,12;UBERON:0001032,1.32e-09,12;UBERON:0004456,1.32e-09,12;UBERON:0010371,1.49e-09,73;UBERON:0004121,4.12e-09,95;UBERON:0000924,4.12e-09,95;UBERON:0006601,4.12e-09,95;UBERON:0000033,8.65e-09,13;UBERON:0005085,8.65e-09,13;UBERON:0001444,7.55e-08,11;UBERON:0002780,4.19e-07,39;UBERON:0001890,4.19e-07,39;UBERON:0006240,4.19e-07,39;UBERON:0003080,7.25e-07,40 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,1.61853168687678,0,0.633831403506179,0,0,0,0,0,0,1.15265491596466,1.34796496001021,1.08004750665353,1.47227472945967,0.285650984403804,0.441737081903227,1.34739879136449,1.0543001812006,0.919218786610021,0,0,0,0.527545150920775,1.46380229763855,2.6045668527838,0,0,0,0,0.854230084794618,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.520455980298408,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0.457500602818626,0.753926112677186,0,0,0,0,0.611036183101898,0,0,0,2.73252930221678,2.06911893990126,1.0803727788321,0.753524089178575,2.51735046859913,1.15302348256365,1.12442069471675,0.258703370739016,2.15567992932842,1.51284864134255,0.703804496655795,0.657587197282725,0,0,0,0.995171334092466,0,0,0,1.44988040774851,2.34526059981096,0.540186184383045,1.42046841351126,0.393528463494808,0.617068451549513,0,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0,0,0,1.3377599609307,0,0,1.2797295032114,0.464473343720877,0.902072229254653,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0,0,1.32767530667157,0.799739588268102,1.1270773567308,0,0.775809948670503,0.280543279561274,0.252946148497029,0,0,0,0,0.166845105716094,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0.162964976442026,0.339490171550376,0.234690248288502,0,0,0,0,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0,0,0.327869890753351,0,0.315508219416257,0.390438744296638,0.646270193198397,1.19484398976276,0.668396022247182,0.566153061577665,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0.890328018336276,0.81443479676788,0,0,0.728341908464944,0,0,0,0,0.258428293168221,0,0,0,0,0,0,2.70091641046965,3.23396709456886,1.71469628025274,1.24138163549592,0.891844088010353,0.329098041204242,0,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,1.58167996790568,0.609958401380546,0.216010681643603,0.418176592028937,0.218362563746178,0,0,0,0.129614973291793,0,0,0.299033092087958,0.66183396182839,0.777804753376191,0.129159823477731,0.337912250981556,0.58678619322877,0.39061315453185,0,0.241584120826006,0,0.316011120628178,0.405450430580328,0.205421914329655,0.51968329191118,0,0,0.360586348559907,0.147689527174577,0.302899349844443,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24544817101012,3.59122386060928,0.853668028770671,0.243106717068294,1.04806581313991,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.347652977834566,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0.355905054372522,0.29551344712669,0,0.309873682371932,0.385813221962283,0.749431733813838,0,0.429742108096597,0.382576664137687,0,0 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,1.61853168687678,0,0.633831403506179,0,0,0,0,0,0,1.15265491596466,1.34796496001021,1.08004750665353,1.47227472945967,0.285650984403804,0.441737081903227,1.34739879136449,1.0543001812006,0.919218786610021,0,0,0,0.527545150920775,1.46380229763855,2.6045668527838,0,0,0,0,0.854230084794618,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.520455980298408,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0.457500602818626,0.753926112677186,0,0,0,0,0.611036183101898,0,0,0,2.73252930221678,2.06911893990126,1.0803727788321,0.753524089178575,2.51735046859913,1.15302348256365,1.12442069471675,0.258703370739016,2.15567992932842,1.51284864134255,0.703804496655795,0.657587197282725,0,0,0,0.995171334092466,0,0,0,1.44988040774851,2.34526059981096,0.540186184383045,1.42046841351126,0.393528463494808,0.617068451549513,0,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0,0,0,1.3377599609307,0,0,1.2797295032114,0.464473343720877,0.902072229254653,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0,0,1.32767530667157,0.799739588268102,1.1270773567308,0,0.775809948670503,0.280543279561274,0.252946148497029,0,0,0,0,0.166845105716094,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0.162964976442026,0.339490171550376,0.234690248288502,0,0,0,0,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0,0,0.327869890753351,0,0.315508219416257,0.390438744296638,0.646270193198397,1.19484398976276,0.668396022247182,0.566153061577665,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0.890328018336276,0.81443479676788,0,0,0.728341908464944,0,0,0,0,0.258428293168221,0,0,0,0,0,0,2.70091641046965,3.23396709456886,1.71469628025274,1.24138163549592,0.891844088010353,0.329098041204242,0,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,1.58167996790568,0.609958401380546,0.216010681643603,0.418176592028937,0.218362563746178,0,0,0,0.129614973291793,0,0,0.299033092087958,0.66183396182839,0.777804753376191,0.129159823477731,0.337912250981556,0.58678619322877,0.39061315453185,0,0.241584120826006,0,0.316011120628178,0.405450430580328,0.205421914329655,0.51968329191118,0,0,0.360586348559907,0.147689527174577,0.302899349844443,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24544817101012,3.59122386060928,0.853668028770671,0.243106717068294,1.04806581313991,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.347652977834566,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0.355905054372522,0.29551344712669,0,0.309873682371932,0.385813221962283,0.749431733813838,0,0.429742108096597,0.382576664137687,0,0 | ||
|short_description=p11@Midn | |||
}} | }} |
Latest revision as of 09:34, 26 September 2015
Short description: | p11@Midn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Midn_5end |
Coexpression cluster: | NA |
Association with transcript: | -153bp_to_ENSMUST00000146516_5end |
EntrezGene: | Midn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 6.24e-10 | 6 |
CNS neuron (sensu Vertebrata) | 2.72e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.72e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 4.93e-13 | 49 |
neurectoderm | 3.46e-10 | 64 |
neural plate | 3.46e-10 | 64 |
presumptive neural plate | 3.46e-10 | 64 |
eye | 9.56e-10 | 9 |
camera-type eye | 9.56e-10 | 9 |
simple eye | 9.56e-10 | 9 |
immature eye | 9.56e-10 | 9 |
ocular region | 9.56e-10 | 9 |
visual system | 9.56e-10 | 9 |
face | 9.56e-10 | 9 |
optic cup | 9.56e-10 | 9 |
optic vesicle | 9.56e-10 | 9 |
eye primordium | 9.56e-10 | 9 |
structure with developmental contribution from neural crest | 1.03e-09 | 92 |
sense organ | 1.32e-09 | 12 |
sensory system | 1.32e-09 | 12 |
entire sense organ system | 1.32e-09 | 12 |
ecto-epithelium | 1.49e-09 | 73 |
ectoderm-derived structure | 4.12e-09 | 95 |
ectoderm | 4.12e-09 | 95 |
presumptive ectoderm | 4.12e-09 | 95 |
head | 8.65e-09 | 13 |
ectodermal placode | 8.65e-09 | 13 |
subdivision of head | 7.55e-08 | 11 |
regional part of forebrain | 4.19e-07 | 39 |
forebrain | 4.19e-07 | 39 |
future forebrain | 4.19e-07 | 39 |
anterior neural tube | 7.25e-07 | 40 |