Personal tools

FFCP PHASE1:Mm9::chr1:133422168..133422195,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14270
|EntrezGene=14270
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc011wrq.1_5end
|association_with_transcript=0bp_to_uc011wrq.1_5end
|cluster_id=chr1:133422168..133422195,-
|description=CAGE_peak_6_at_Srgap2_5end
|description=CAGE_peak_6_at_Srgap2_5end
|id=chr1:133422168..133422195,-
|id=chr1:133422168..133422195,-
|ontology_enrichment_celltype=CL:0000540!2.26e-16!33;CL:0000047!2.26e-16!33;CL:0000031!2.26e-16!33;CL:0000404!2.26e-16!33;CL:0000393!7.50e-15!39;CL:0000211!7.50e-15!39;CL:0000117!3.88e-13!23;CL:0000337!3.88e-13!23;CL:0000221!6.18e-12!44;CL:0000133!6.18e-12!44;CL:0002319!1.40e-11!43;CL:0000055!2.61e-10!50
|ontology_enrichment_celltype=CL:0000540!2.26e-16!33;CL:0000047!2.26e-16!33;CL:0000031!2.26e-16!33;CL:0000404!2.26e-16!33;CL:0000393!7.50e-15!39;CL:0000211!7.50e-15!39;CL:0000117!3.88e-13!23;CL:0000337!3.88e-13!23;CL:0000221!6.18e-12!44;CL:0000133!6.18e-12!44;CL:0002319!1.40e-11!43;CL:0000055!2.61e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.17e-23,33;CL:0000047,1.17e-23,33;CL:0000031,1.17e-23,33;CL:0000404,1.17e-23,33;CL:0000117,1.05e-20,23;CL:0000337,1.05e-20,23;CL:0000393,1.14e-18,39;CL:0000211,1.14e-18,39;CL:0000221,4.72e-18,44;CL:0000133,4.72e-18,44;CL:0002319,2.13e-17,43;CL:0002609,6.31e-09,6;CL:0002321,3.35e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.58e-17!75;UBERON:0001016!3.58e-17!75;UBERON:0001017!1.32e-16!73;UBERON:0005743!1.32e-16!73;UBERON:0004121!1.82e-15!102;UBERON:0000924!1.82e-15!102;UBERON:0006601!1.82e-15!102;UBERON:0002020!2.37e-13!34;UBERON:0001049!2.70e-12!52;UBERON:0005068!2.70e-12!52;UBERON:0006241!2.70e-12!52;UBERON:0007135!2.70e-12!52;UBERON:0002346!1.86e-11!71;UBERON:0003075!1.86e-11!71;UBERON:0007284!1.86e-11!71;UBERON:0000955!1.71e-10!50;UBERON:0006238!1.71e-10!50;UBERON:0002791!2.02e-10!29;UBERON:0003528!2.02e-10!29;UBERON:0001893!2.02e-10!29;UBERON:0002616!2.80e-10!49;UBERON:0003080!1.63e-09!40;UBERON:0000033!2.18e-09!63;UBERON:0002780!3.92e-09!39;UBERON:0001890!3.92e-09!39;UBERON:0006240!3.92e-09!39;UBERON:0003056!4.00e-09!49;UBERON:0000956!3.90e-07!21;UBERON:0001869!3.90e-07!21;UBERON:0000203!3.90e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.42e-21,75;UBERON:0001017,5.72e-21,73;UBERON:0002020,7.79e-19,34;UBERON:0000073,1.48e-16,54;UBERON:0004121,8.15e-16,95;UBERON:0000924,8.15e-16,95;UBERON:0006601,8.15e-16,95;UBERON:0001049,2.69e-15,52;UBERON:0005068,2.69e-15,52;UBERON:0006241,2.69e-15,52;UBERON:0007135,2.69e-15,52;UBERON:0003528,1.21e-13,29;UBERON:0002791,1.21e-13,29;UBERON:0001893,1.21e-13,29;UBERON:0002346,1.33e-12,64;UBERON:0003075,1.33e-12,64;UBERON:0007284,1.33e-12,64;UBERON:0010371,1.66e-11,73;UBERON:0002616,2.22e-11,46;UBERON:0003080,2.68e-11,40;UBERON:0000955,5.54e-11,47;UBERON:0006238,5.54e-11,47;UBERON:0002780,1.17e-10,39;UBERON:0001890,1.17e-10,39;UBERON:0006240,1.17e-10,39;UBERON:0000956,2.23e-10,21;UBERON:0001869,2.23e-10,21;UBERON:0000203,2.23e-10,21;UBERON:0003056,4.81e-08,49;UBERON:0001948,3.75e-07,5;UBERON:0002315,3.75e-07,5;UBERON:0002619,9.55e-07,17
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.550640256485045,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0.725362142011344,0.336093799142464,0.514518872071894,0,0,4.65327859977075,6.34789175126439,5.07065122804943,0,0.889294796111139,0,1.97773272513395,1.4209602298922,0,0,2.48855069540346,4.18518408828241,2.3135745748652,2.28520787523043,1.32521124570968,3.67472397644862,4.02550978276593,4.5960939330501,1.10115880999389,1.27687338085188,0.307213066512487,3.95658863190582,4.57438218012048,6.77187381723788,0.279182999001381,1.68828783009504,0.45839474333043,3.53554302568401,6.26435395516053,3.91438836233131,1.21161909333094,0.453429360640713,0.869593466105033,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0.230615497256059,0.452167921657868,0.587943535678524,0.125666591329675,0.247194967734374,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,3.51336956413857,3.77004072264219,0,0,0,0,1.3481157546434,0.915001205637253,12.3141265070607,1.56441888173049,1.79000820131231,1.0389402227978,1.78465389374533,0.305518091550949,0.124406970610093,0.252722758433675,0,0.260240885925407,0.229902104433473,0.900310649026746,0.452114453507145,0.816437989815934,0.768682321709099,0.281105173679186,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0.134206418760372,2.73376933133365,6.07137213037778,0,0,0,0.464473343720877,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0.387904974335251,0.350679099451593,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0,0,0.449724224769707,0,0.241177159752417,0,0,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0.369506380333209,0,0,0,0.469380496577004,0.335012514883631,0.238043640886014,0.390267295715598,0.788175720530955,0.221464689648775,0.318909537314974,0.163863314715738,0.518054945597687,0.144649058581512,0,0.54390568381871,0.491764273019036,0,0.160550589987792,0.234423373184406,0.327869890753351,0,1.57754109708128,0.780877488593277,1.29254038639679,0.955875191810208,1.78238939265915,1.41538265394416,1.61924280669958,1.75353514746787,1.97643888973262,0.642642632843614,0.141940085208269,0,0.651547837414304,0,0,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,0.178368817602071,0.493647061806363,0.304464949114599,0.469343416127421,0.42366414172764,0,1.31909002353184,0.968786560175433,0.482503399425247,0.238744688006273,0.328281799490123,0,0.370850604021019,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.234714477291508,0.2604087696879,0,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0,0,0.100966449948148,0.304827226619999,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,3.3885110557024,2.30162618253588,3.43737308063638,1.89038500578056,0.685082519770642,0,0,0.900642406448441,2.26571204492102,0.51776031175182,0.103787347584177,0.399024873401031,0.682934423016537,0.729320151204882,0.838452650511929,0.735374033800057,2.00022055021454,2.06035057238894,1.92551525755089,2.02157769411038,2.5347929989024,1.32038438970253,1.68554713445788,1.28050304809739,1.37845125493472,1.90517476513229,1.27472758539341,1.35036454324594,0.824171801606613,1.03039244094078,2.05721551431249,1.77475806159337,0.476872379894642,2.18019624948493,1.12931256498397,1.09998990259179,1.09756783723664,1.8414879800649,2.58027816307137,1.12228454331548,1.42362021749009,1.18205378850676,2.04615521584845,1.85924209423159,0.964533054905707,2.49810577937946,0.935726433781634,1.71896843238639,0.765153328275374,0.661774257358546,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.550640256485045,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0.725362142011344,0.336093799142464,0.514518872071894,0,0,4.65327859977075,6.34789175126439,5.07065122804943,0,0.889294796111139,0,1.97773272513395,1.4209602298922,0,0,2.48855069540346,4.18518408828241,2.3135745748652,2.28520787523043,1.32521124570968,3.67472397644862,4.02550978276593,4.5960939330501,1.10115880999389,1.27687338085188,0.307213066512487,3.95658863190582,4.57438218012048,6.77187381723788,0.279182999001381,1.68828783009504,0.45839474333043,3.53554302568401,6.26435395516053,3.91438836233131,1.21161909333094,0.453429360640713,0.869593466105033,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0.230615497256059,0.452167921657868,0.587943535678524,0.125666591329675,0.247194967734374,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,3.51336956413857,3.77004072264219,0,0,0,0,1.3481157546434,0.915001205637253,12.3141265070607,1.56441888173049,1.79000820131231,1.0389402227978,1.78465389374533,0.305518091550949,0.124406970610093,0.252722758433675,0,0.260240885925407,0.229902104433473,0.900310649026746,0.452114453507145,0.816437989815934,0.768682321709099,0.281105173679186,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0.134206418760372,2.73376933133365,6.07137213037778,0,0,0,0.464473343720877,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0.387904974335251,0.350679099451593,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0,0,0.449724224769707,0,0.241177159752417,0,0,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0.369506380333209,0,0,0,0.469380496577004,0.335012514883631,0.238043640886014,0.390267295715598,0.788175720530955,0.221464689648775,0.318909537314974,0.163863314715738,0.518054945597687,0.144649058581512,0,0.54390568381871,0.491764273019036,0,0.160550589987792,0.234423373184406,0.327869890753351,0,1.57754109708128,0.780877488593277,1.29254038639679,0.955875191810208,1.78238939265915,1.41538265394416,1.61924280669958,1.75353514746787,1.97643888973262,0.642642632843614,0.141940085208269,0,0.651547837414304,0,0,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,0.178368817602071,0.493647061806363,0.304464949114599,0.469343416127421,0.42366414172764,0,1.31909002353184,0.968786560175433,0.482503399425247,0.238744688006273,0.328281799490123,0,0.370850604021019,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.234714477291508,0.2604087696879,0,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0,0,0.100966449948148,0.304827226619999,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,3.3885110557024,2.30162618253588,3.43737308063638,1.89038500578056,0.685082519770642,0,0,0.900642406448441,2.26571204492102,0.51776031175182,0.103787347584177,0.399024873401031,0.682934423016537,0.729320151204882,0.838452650511929,0.735374033800057,2.00022055021454,2.06035057238894,1.92551525755089,2.02157769411038,2.5347929989024,1.32038438970253,1.68554713445788,1.28050304809739,1.37845125493472,1.90517476513229,1.27472758539341,1.35036454324594,0.824171801606613,1.03039244094078,2.05721551431249,1.77475806159337,0.476872379894642,2.18019624948493,1.12931256498397,1.09998990259179,1.09756783723664,1.8414879800649,2.58027816307137,1.12228454331548,1.42362021749009,1.18205378850676,2.04615521584845,1.85924209423159,0.964533054905707,2.49810577937946,0.935726433781634,1.71896843238639,0.765153328275374,0.661774257358546,0.463735671240843
|short_description=p6@Srgap2
|short_description=p6@Srgap2
}}
}}

Latest revision as of 08:28, 26 September 2015

Short description:p6@Srgap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Srgap2_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_uc011wrq.1_5end
EntrezGene:Srgap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Srgap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F112.31
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G16.07
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system3.42e-2175
central nervous system5.72e-2173
gray matter7.79e-1934
regional part of nervous system1.48e-1654
ectoderm-derived structure8.15e-1695
ectoderm8.15e-1695
presumptive ectoderm8.15e-1695
neural tube2.69e-1552
neural rod2.69e-1552
future spinal cord2.69e-1552
neural keel2.69e-1552
brain grey matter1.21e-1329
regional part of telencephalon1.21e-1329
telencephalon1.21e-1329
neurectoderm1.33e-1264
neural plate1.33e-1264
presumptive neural plate1.33e-1264
ecto-epithelium1.66e-1173
regional part of brain2.22e-1146
anterior neural tube2.68e-1140
brain5.54e-1147
future brain5.54e-1147
regional part of forebrain1.17e-1039
forebrain1.17e-1039
future forebrain1.17e-1039
cerebral cortex2.23e-1021
cerebral hemisphere2.23e-1021
pallium2.23e-1021
pre-chordal neural plate4.81e-0849
regional part of spinal cord3.75e-075
gray matter of spinal cord3.75e-075
regional part of cerebral cortex9.55e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:133422168..133422195,-&oldid=4243262"