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FFCP PHASE1:Mm9::chr2:180773865..180773897,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11438
|EntrezGene=11438
|HGNC=
|HGNC=
|MCL_coexpression_id=189
|TSSclassifier=NA
|UniProt=B7ZBU7,O70174,Q53YK0
|UniProt=B7ZBU7,O70174,Q53YK0
|association_with_transcript=0bp_to_ENSMUST00000108851,NM_015730,uc008okq.1_5end
|association_with_transcript=0bp_to_ENSMUST00000108851,NM_015730,uc008okq.1_5end
|cluster_id=chr2:180773865..180773897,-
|description=CAGE_peak_4_at_Chrna4_5end
|description=CAGE_peak_4_at_Chrna4_5end
|id=chr2:180773865..180773897,-
|id=chr2:180773865..180773897,-
|ontology_enrichment_celltype=CL:0000221!6.06e-09!44;CL:0000133!6.06e-09!44;CL:0000117!8.39e-09!23;CL:0000337!8.39e-09!23;CL:0002319!1.18e-08!43;CL:0000540!3.80e-08!33;CL:0000047!3.80e-08!33;CL:0000031!3.80e-08!33;CL:0000404!3.80e-08!33;CL:0000055!5.17e-07!50
|ontology_enrichment_celltype=CL:0000221!6.06e-09!44;CL:0000133!6.06e-09!44;CL:0000117!8.39e-09!23;CL:0000337!8.39e-09!23;CL:0002319!1.18e-08!43;CL:0000540!3.80e-08!33;CL:0000047!3.80e-08!33;CL:0000031!3.80e-08!33;CL:0000404!3.80e-08!33;CL:0000055!5.17e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-23,23;CL:0000337,2.49e-23,23;CL:0000540,6.74e-15,33;CL:0000047,6.74e-15,33;CL:0000031,6.74e-15,33;CL:0000404,6.74e-15,33;CL:0000393,6.22e-12,39;CL:0000211,6.22e-12,39;CL:0002319,9.39e-12,43;CL:0000221,2.20e-11,44;CL:0000133,2.20e-11,44;CL:0002610,5.25e-08,3;CL:0002614,2.66e-07,3;CL:0000120,6.21e-07,3;CL:0002612,6.50e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.13e-27!102;UBERON:0000924!1.13e-27!102;UBERON:0006601!1.13e-27!102;UBERON:0002346!2.13e-23!71;UBERON:0003075!2.13e-23!71;UBERON:0007284!2.13e-23!71;UBERON:0001017!3.30e-23!73;UBERON:0005743!3.30e-23!73;UBERON:0000073!1.32e-22!75;UBERON:0001016!1.32e-22!75;UBERON:0000033!1.62e-19!63;UBERON:0001049!1.02e-16!52;UBERON:0005068!1.02e-16!52;UBERON:0006241!1.02e-16!52;UBERON:0007135!1.02e-16!52;UBERON:0003056!2.41e-15!49;UBERON:0000955!2.65e-15!50;UBERON:0006238!2.65e-15!50;UBERON:0002616!9.33e-15!49;UBERON:0002020!1.74e-12!34;UBERON:0003080!1.23e-10!40;UBERON:0007811!3.80e-10!86;UBERON:0002780!6.05e-10!39;UBERON:0001890!6.05e-10!39;UBERON:0006240!6.05e-10!39;UBERON:0002791!4.83e-09!29;UBERON:0003528!4.83e-09!29;UBERON:0001893!4.83e-09!29;UBERON:0002021!2.13e-08!10;UBERON:0000411!2.13e-08!10;UBERON:0001950!2.13e-08!10;UBERON:0000153!2.14e-08!94;UBERON:0003076!2.13e-07!12;UBERON:0003057!2.13e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.64e-27,64;UBERON:0003075,1.64e-27,64;UBERON:0007284,1.64e-27,64;UBERON:0004121,8.12e-27,95;UBERON:0000924,8.12e-27,95;UBERON:0006601,8.12e-27,95;UBERON:0000073,1.11e-26,54;UBERON:0001017,2.77e-26,73;UBERON:0001016,2.33e-25,75;UBERON:0001049,2.84e-23,52;UBERON:0005068,2.84e-23,52;UBERON:0006241,2.84e-23,52;UBERON:0007135,2.84e-23,52;UBERON:0010371,4.05e-23,73;UBERON:0002020,9.17e-22,34;UBERON:0003056,1.38e-19,49;UBERON:0010314,6.98e-18,92;UBERON:0002616,5.76e-15,46;UBERON:0002021,6.02e-15,10;UBERON:0000411,6.02e-15,10;UBERON:0001950,6.02e-15,10;UBERON:0000955,1.56e-14,47;UBERON:0006238,1.56e-14,47;UBERON:0003528,3.07e-14,29;UBERON:0002791,3.07e-14,29;UBERON:0001893,3.07e-14,29;UBERON:0003080,3.35e-14,40;UBERON:0002780,7.47e-13,39;UBERON:0001890,7.47e-13,39;UBERON:0006240,7.47e-13,39;UBERON:0002240,1.13e-12,6;UBERON:0005174,1.13e-12,6;UBERON:0001137,1.13e-12,6;UBERON:0001948,1.08e-10,5;UBERON:0002315,1.08e-10,5;UBERON:0003076,1.96e-10,12;UBERON:0003057,1.96e-10,12;UBERON:0002950,2.51e-09,4;UBERON:0001891,2.51e-09,4;UBERON:0009616,2.51e-09,4;UBERON:0010286,2.51e-09,4;UBERON:0002420,9.06e-09,8;UBERON:0007245,9.06e-09,8;UBERON:0010009,9.06e-09,8;UBERON:0010011,9.06e-09,8;UBERON:0000454,9.06e-09,8;UBERON:0002619,4.65e-08,17;UBERON:0004684,5.25e-08,3;UBERON:0002275,5.25e-08,3;UBERON:0000956,1.07e-07,21;UBERON:0001869,1.07e-07,21;UBERON:0000203,1.07e-07,21;UBERON:0002038,2.66e-07,3;UBERON:0009663,2.66e-07,3;UBERON:0009661,2.66e-07,3;UBERON:0000125,2.66e-07,3;UBERON:0002308,2.66e-07,3;UBERON:0000025,5.89e-07,114;UBERON:0002257,6.50e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,3.03474691289397,3.1739458756322,3.1691570175309,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,5.42736870367227,3.3130281142742,0,0,0,14.3150645299205,17.8762273319263,18.279177457493,1.84640802822271,2.56165402086747,1.56274011167028,8.65467296904281,2.25105044012672,7.63991238884051,4.41942878210502,3.98640706237488,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,7.63932260964596,0.915001205637253,0.251308704225729,2.25971616249959,2.30143911597297,9.97382613885888,5.353961681236,0.305518091550949,0,0,1.47309299120532,0.260240885925407,0.689706313300419,1.44049703844279,1.20563854268572,2.10913147369116,1.2811372028485,1.40552586839593,0.517406741478031,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0.407302655690628,0,0.140271639780637,0.948548056863859,1.03327103585722,0.627994911365499,1.23397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,4.21962071731931,0,0,0,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,0.963963949265421,0.283880170416537,0.178065603667255,0.325773918707152,0.494910368917606,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0,0.608929898229199,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.596861720015682,0.492422699235184,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.506868376472335,0,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,2.25900737046827,1.84130094602871,2.86447756719698,2.23409137046794,2.05524755931193,2.2661816921691,3.37511250115903,0.900642406448441,2.71885445390523,6.21312374102184,0.103787347584177,1.19707462020309,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,1.42888107384922,0,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0,0.145346416632329,0.376437521661322,0.169229215783353,0.548783918618318,0.263069711437843,0,0,0.237270036248348,0,0,0.309873682371932,0.192906610981141,0.999242311751784,0.233931608445408,0.214871054048298,0,0.220591419119515,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,3.03474691289397,3.1739458756322,3.1691570175309,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,5.42736870367227,3.3130281142742,0,0,0,14.3150645299205,17.8762273319263,18.279177457493,1.84640802822271,2.56165402086747,1.56274011167028,8.65467296904281,2.25105044012672,7.63991238884051,4.41942878210502,3.98640706237488,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,7.63932260964596,0.915001205637253,0.251308704225729,2.25971616249959,2.30143911597297,9.97382613885888,5.353961681236,0.305518091550949,0,0,1.47309299120532,0.260240885925407,0.689706313300419,1.44049703844279,1.20563854268572,2.10913147369116,1.2811372028485,1.40552586839593,0.517406741478031,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0.407302655690628,0,0.140271639780637,0.948548056863859,1.03327103585722,0.627994911365499,1.23397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,4.21962071731931,0,0,0,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,0.963963949265421,0.283880170416537,0.178065603667255,0.325773918707152,0.494910368917606,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0,0.608929898229199,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.596861720015682,0.492422699235184,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.506868376472335,0,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,2.25900737046827,1.84130094602871,2.86447756719698,2.23409137046794,2.05524755931193,2.2661816921691,3.37511250115903,0.900642406448441,2.71885445390523,6.21312374102184,0.103787347584177,1.19707462020309,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,1.42888107384922,0,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0,0.145346416632329,0.376437521661322,0.169229215783353,0.548783918618318,0.263069711437843,0,0,0.237270036248348,0,0,0.309873682371932,0.192906610981141,0.999242311751784,0.233931608445408,0.214871054048298,0,0.220591419119515,0
|short_description=p4@Chrna4
|short_description=p4@Chrna4
}}
}}

Latest revision as of 07:52, 26 September 2015

Short description:p4@Chrna4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Chrna4_5end
Coexpression cluster:MCL_coexpression_mm9:189
Association with transcript: 0bp_to_ENSMUST00000108851, NM_015730, uc008okq.1_5end
EntrezGene:Chrna4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Chrna4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.88
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.65
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.64
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.11
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.64e-2764
neural plate1.64e-2764
presumptive neural plate1.64e-2764
ectoderm-derived structure8.12e-2795
ectoderm8.12e-2795
presumptive ectoderm8.12e-2795
regional part of nervous system1.11e-2654
central nervous system2.77e-2673
nervous system2.33e-2575
neural tube2.84e-2352
neural rod2.84e-2352
future spinal cord2.84e-2352
neural keel2.84e-2352
ecto-epithelium4.05e-2373
gray matter9.17e-2234
pre-chordal neural plate1.38e-1949
structure with developmental contribution from neural crest6.98e-1892
regional part of brain5.76e-1546
occipital lobe6.02e-1510
visual cortex6.02e-1510
neocortex6.02e-1510
brain1.56e-1447
future brain1.56e-1447
brain grey matter3.07e-1429
regional part of telencephalon3.07e-1429
telencephalon3.07e-1429
anterior neural tube3.35e-1440
regional part of forebrain7.47e-1339
forebrain7.47e-1339
future forebrain7.47e-1339
spinal cord1.13e-126
dorsal region element1.13e-126
dorsum1.13e-126
regional part of spinal cord1.08e-105
gray matter of spinal cord1.08e-105
posterior neural tube1.96e-1012
chordal neural plate1.96e-1012
regional part of midbrain2.51e-094
midbrain2.51e-094
presumptive midbrain2.51e-094
midbrain neural tube2.51e-094
basal ganglion9.06e-098
nuclear complex of neuraxis9.06e-098
aggregate regional part of brain9.06e-098
collection of basal ganglia9.06e-098
cerebral subcortex9.06e-098
regional part of cerebral cortex4.65e-0817
raphe nuclei5.25e-083
reticular formation5.25e-083
cerebral cortex1.07e-0721
cerebral hemisphere1.07e-0721
pallium1.07e-0721
substantia nigra2.66e-073
telencephalic nucleus2.66e-073
midbrain nucleus2.66e-073
neural nucleus2.66e-073
nucleus of brain2.66e-073
tube5.89e-07114
ventral horn of spinal cord6.50e-073
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