FFCP PHASE1:Mm9::chr17:34341529..34341538,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:34341529..34341538,+
|short_description=p3@Tap2
|description=CAGE_peak_3_at_Tap2_5end
|association_with_transcript=17bp_to_ENSMUST00000127543_5end
|Entre...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21355 | |EntrezGene=21355 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENSMUST00000127543_5end | |||
|cluster_id=chr17:34341529..34341538,+ | |||
|description=CAGE_peak_3_at_Tap2_5end | |||
|id=chr17:34341529..34341538,+ | |||
|ontology_enrichment_celltype=CL:0000063!3.10e-07!66;CL:0000988!9.45e-07!32;CL:0002032!9.45e-07!32;CL:0000037!9.45e-07!32;CL:0000566!9.45e-07!32;CL:0000837!9.45e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.16e-14,6;CL:0000677,8.16e-14,6;CL:0000584,8.16e-14,6;CL:0000075,1.04e-11,7;CL:0002563,6.67e-09,9;CL:0002251,6.67e-09,9;CL:0000682,6.93e-08,3;CL:0000066,2.83e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.74e-13!48;UBERON:0002390!1.34e-11!45;UBERON:0003061!1.34e-11!45;UBERON:0004177!2.84e-09!29;UBERON:0006562!3.82e-09!24;UBERON:0001557!3.82e-09!24;UBERON:0001042!3.82e-09!24;UBERON:0008814!3.82e-09!24;UBERON:0009145!3.82e-09!24;UBERON:0002370!4.74e-09!23;UBERON:0000974!4.74e-09!23;UBERON:0004807!4.74e-09!23;UBERON:0005058!4.74e-09!23;UBERON:0003351!4.74e-09!23;UBERON:0009113!4.74e-09!23;UBERON:0003295!4.74e-09!23;UBERON:0009722!4.74e-09!23;UBERON:0005562!4.74e-09!23;UBERON:0007690!4.74e-09!23;UBERON:0000344!1.95e-08!15;UBERON:0003408!2.38e-08!24;UBERON:0000072!3.83e-08!27;UBERON:0002405!5.20e-08!70;UBERON:0000063!1.76e-07!35;UBERON:0004923!2.59e-07!24;UBERON:0000490!2.87e-07!66;UBERON:0007023!6.05e-07!51;UBERON:0001242!7.35e-07!13;UBERON:0000060!7.35e-07!13;UBERON:0001262!7.35e-07!13;UBERON:0004786!7.35e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.36e-17,15;UBERON:0001242,4.98e-13,13;UBERON:0001262,4.98e-13,13;UBERON:0004786,4.98e-13,13;UBERON:0004923,1.55e-09,24;UBERON:0003350,6.67e-09,9;UBERON:0004808,6.67e-09,9;UBERON:0001277,6.67e-09,9;UBERON:0000485,4.06e-07,11;UBERON:0003929,9.92e-07,55 | |||
|phase1_expression=0,3.48975407639361,7.27998783023258,4.53696316960245,5.00895729946347,3.02182689441402,3.27057696833736,0.516493293766305,0.140788722151667,1.87251621057595,0.513653904676515,0.239316476986009,1.02720437958723,0.524522414513984,0,0.202475267389826,0,0.315462165358238,0.411343300817216,0.42438965179803,0.765389611359628,0.992909512008853,2.87319768052829,4.7997726838022,5.73523202667925,3.44539178469012,5.59990595006797,6.67960821326256,0.950117097281869,1.76421090831952,3.99114919179548,0,0,0,0,0.166234645358492,0,0.837063261473815,0.7813353445238,1.57057123192139,0,1.36609096991689,1.45653105909346,0.251793635951155,0.811015449756117,0.917733760808408,0.782391344348039,0,0.659058548203415,0.58328969722285,0,0,0.503347818173209,2.17608642603403,0.336093799142464,0,0,0.515672092277442,0,0,0,0,0,0,2.96659908770092,0.7104801149461,0.898800331555214,1.53687322128622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0.70667914902068,0,1.28326477414318,0,0,0,0.506719730950197,0,1.25602267690966,0.776813650941515,0.593768556259299,0,0,0,0,0,0,0,1.01219549843938,0,0.161766849947409,0,0.484875253135222,1.86391761218122,0,0,0.255457055208591,1.31796636956512,1.19980546198682,0.762421362438388,0,0.457500602818626,0,0,0,0,0.324482526135515,0,0,0.252722758433675,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0.702213187313235,0.772043721344145,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0.324275238183423,0,0.219550115291051,0.402619256281115,0.210289948564127,0,5.28670052774077,0.793351699990633,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0,0,0.739012760666419,0,0,0,0,0,0,0.195133647857799,0,0.44292937929755,0.478364305972461,0.163863314715738,0.172684981865896,0.433947175744535,0,0.54390568381871,1.47529281905711,1.93155722413313,0.481651769963376,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0.709700426041343,0,0,1.15479086080775,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,1.02131881726136,0,0,0,0,0,0,0,0.469343416127421,0,0.441056796109924,1.31909002353184,0,0,0,0.328281799490123,0,0.18542530201051,0.512612642393558,0.206386867963223,0.185194527369712,0.376736914009382,0,0.457556346413045,0.679913719975421,2.23922323717853,2.21119958087078,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,0.405450430580328,0.308132871494482,1.03936658382236,1.43221356533985,0.993406773906324,1.20195449519969,1.32920574457119,1.11063094942962,0.914481679859998,1.00826185136841,0.779663045918019,0.865906574762965,1.75315353272353,0.226730383615211,0.221985953374065,0,0.167884616364078,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,3.48975407639361,7.27998783023258,4.53696316960245,5.00895729946347,3.02182689441402,3.27057696833736,0.516493293766305,0.140788722151667,1.87251621057595,0.513653904676515,0.239316476986009,1.02720437958723,0.524522414513984,0,0.202475267389826,0,0.315462165358238,0.411343300817216,0.42438965179803,0.765389611359628,0.992909512008853,2.87319768052829,4.7997726838022,5.73523202667925,3.44539178469012,5.59990595006797,6.67960821326256,0.950117097281869,1.76421090831952,3.99114919179548,0,0,0,0,0.166234645358492,0,0.837063261473815,0.7813353445238,1.57057123192139,0,1.36609096991689,1.45653105909346,0.251793635951155,0.811015449756117,0.917733760808408,0.782391344348039,0,0.659058548203415,0.58328969722285,0,0,0.503347818173209,2.17608642603403,0.336093799142464,0,0,0.515672092277442,0,0,0,0,0,0,2.96659908770092,0.7104801149461,0.898800331555214,1.53687322128622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0.70667914902068,0,1.28326477414318,0,0,0,0.506719730950197,0,1.25602267690966,0.776813650941515,0.593768556259299,0,0,0,0,0,0,0,1.01219549843938,0,0.161766849947409,0,0.484875253135222,1.86391761218122,0,0,0.255457055208591,1.31796636956512,1.19980546198682,0.762421362438388,0,0.457500602818626,0,0,0,0,0.324482526135515,0,0,0.252722758433675,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0.702213187313235,0.772043721344145,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0.324275238183423,0,0.219550115291051,0.402619256281115,0.210289948564127,0,5.28670052774077,0.793351699990633,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0,0,0.739012760666419,0,0,0,0,0,0,0.195133647857799,0,0.44292937929755,0.478364305972461,0.163863314715738,0.172684981865896,0.433947175744535,0,0.54390568381871,1.47529281905711,1.93155722413313,0.481651769963376,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0.709700426041343,0,0,1.15479086080775,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,1.02131881726136,0,0,0,0,0,0,0,0.469343416127421,0,0.441056796109924,1.31909002353184,0,0,0,0.328281799490123,0,0.18542530201051,0.512612642393558,0.206386867963223,0.185194527369712,0.376736914009382,0,0.457556346413045,0.679913719975421,2.23922323717853,2.21119958087078,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,0.405450430580328,0.308132871494482,1.03936658382236,1.43221356533985,0.993406773906324,1.20195449519969,1.32920574457119,1.11063094942962,0.914481679859998,1.00826185136841,0.779663045918019,0.865906574762965,1.75315353272353,0.226730383615211,0.221985953374065,0,0.167884616364078,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p3@Tap2 | |||
}} | }} |
Latest revision as of 07:43, 26 September 2015
Short description: | p3@Tap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 17bp_to_ENSMUST00000127543_5end |
EntrezGene: | Tap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.16e-14 | 6 |
gut absorptive cell | 8.16e-14 | 6 |
enterocyte | 8.16e-14 | 6 |
columnar/cuboidal epithelial cell | 1.04e-11 | 7 |
intestinal epithelial cell | 6.67e-09 | 9 |
epithelial cell of alimentary canal | 6.67e-09 | 9 |
M cell of gut | 6.93e-08 | 3 |
epithelial cell | 2.83e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.36e-17 | 15 |
intestinal mucosa | 4.98e-13 | 13 |
wall of intestine | 4.98e-13 | 13 |
gastrointestinal system mucosa | 4.98e-13 | 13 |
organ component layer | 1.55e-09 | 24 |
epithelium of mucosa | 6.67e-09 | 9 |
gastrointestinal system epithelium | 6.67e-09 | 9 |
intestinal epithelium | 6.67e-09 | 9 |
simple columnar epithelium | 4.06e-07 | 11 |
gut epithelium | 9.92e-07 | 55 |