FFCP PHASE1:Mm9::chr5:89194008..89194020,+: Difference between revisions
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{{FFCP|EntrezGene=13178|HGNC=|UniProt=P43346|association_with_transcript=0bp_to_ENSMUST00000031311_5end|description=CAGE_peak_9_at_Dck_5end|id=chr5:89194008..89194020,+|ontology_enrichment_celltype=CL:0000117!1.18e-11!23;CL:0000337!1.18e-11!23;CL:0000540!2.53e-08!33;CL:0000047!2.53e-08!33;CL:0000031!2.53e-08!33;CL:0000404!2.53e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.89e-18,23;CL:0000337,4.89e-18,23;CL:0002609,7.84e-12,6;CL:0000540,1.05e-11,33;CL:0000047,1.05e-11,33;CL:0000031,1.05e-11,33;CL:0000404,1.05e-11,33;CL:0000393,1.80e-09,39;CL:0000211,1.80e-09,39;CL:0000120,2.69e-09,3;CL:0002613,8.75e-09,3;CL:0002319,2.47e-08,43;CL:0000221,4.42e-08,44;CL:0000133,4.42e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,9.30e-09,3;DOID:4045,9.30e-09,3|ontology_enrichment_uberon=UBERON:0001049!1.37e-18!52;UBERON:0005068!1.37e-18!52;UBERON:0006241!1.37e-18!52;UBERON:0007135!1.37e-18!52;UBERON:0003056!7.64e-17!49;UBERON:0002346!4.63e-16!71;UBERON:0003075!4.63e-16!71;UBERON:0007284!4.63e-16!71;UBERON:0000033!1.22e-15!63;UBERON:0002616!1.91e-15!49;UBERON:0002020!2.66e-15!34;UBERON:0001017!6.31e-15!73;UBERON:0005743!6.31e-15!73;UBERON:0000153!9.44e-15!94;UBERON:0007811!1.05e-14!86;UBERON:0002780!1.08e-14!39;UBERON:0001890!1.08e-14!39;UBERON:0006240!1.08e-14!39;UBERON:0003080!1.14e-14!40;UBERON:0000955!1.14e-14!50;UBERON:0006238!1.14e-14!50;UBERON:0000073!4.42e-14!75;UBERON:0001016!4.42e-14!75;UBERON:0004121!1.44e-13!102;UBERON:0000924!1.44e-13!102;UBERON:0006601!1.44e-13!102;UBERON:0002791!3.62e-13!29;UBERON:0003528!3.62e-13!29;UBERON:0001893!3.62e-13!29;UBERON:0000956!8.81e-09!21;UBERON:0001869!8.81e-09!21;UBERON:0000203!8.81e-09!21|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.71e-18,29;UBERON:0002791,2.71e-18,29;UBERON:0001893,2.71e-18,29;UBERON:0002020,2.40e-17,34;UBERON:0002616,4.09e-17,46;UBERON:0000955,1.17e-16,47;UBERON:0006238,1.17e-16,47;UBERON:0001049,1.84e-16,52;UBERON:0005068,1.84e-16,52;UBERON:0006241,1.84e-16,52;UBERON:0007135,1.84e-16,52;UBERON:0000073,1.10e-15,54;UBERON:0001017,7.38e-15,73;UBERON:0002780,1.56e-14,39;UBERON:0001890,1.56e-14,39;UBERON:0006240,1.56e-14,39;UBERON:0001016,2.52e-14,75;UBERON:0003080,4.42e-14,40;UBERON:0002346,5.85e-14,64;UBERON:0003075,5.85e-14,64;UBERON:0007284,5.85e-14,64;UBERON:0003056,2.58e-12,49;UBERON:0010371,1.15e-11,73;UBERON:0000956,2.34e-11,21;UBERON:0001869,2.34e-11,21;UBERON:0000203,2.34e-11,21;UBERON:0004121,2.47e-11,95;UBERON:0000924,2.47e-11,95;UBERON:0006601,2.47e-11,95;UBERON:0000369,4.49e-09,5;UBERON:0002435,4.49e-09,5;UBERON:0000204,4.49e-09,5;UBERON:0010082,4.49e-09,5;UBERON:0002420,1.73e-08,8;UBERON:0007245,1.73e-08,8;UBERON:0010009,1.73e-08,8;UBERON:0010011,1.73e-08,8;UBERON:0000454,1.73e-08,8;UBERON:0010314,2.62e-08,92;UBERON:0002619,8.02e-07,17|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.387369970324729,0,0,0,0.0797721589953364,0.342401459862411,0.524522414513984,0,0,0.699561878128147,0.315462165358238,0.548457734422955,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,2.3440060335714,1.0470474879476,1.76469446409304,1.36609096991689,1.94204141212461,0.251793635951155,0,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0.279972843250725,0,0.167782606057736,0,0,0,0,0.515672092277442,3.03474691289397,3.1739458756322,1.26766280701236,0,0,0.899899717281399,0,0,0,0,3.31806759387129,1.89008313664367,1.89292465216244,0.856952953211411,0.883474163806454,1.71487118900936,1.34183659425531,0.919218786610021,0,0.383062014255563,0.46081959976873,1.05509030184155,1.55528994124096,2.6045668527838,1.67509799400829,0.56276261003168,0.61119299110724,1.47314292736834,0.284743361598206,0.931997229126503,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0.494389935468748,0,0,0,0,1.45462575940567,0,0.585561594023094,1.46612694769419,0,0,0,0,0.299581278809645,1.83000241127451,0.753926112677186,0.695297280769106,1.02286182932132,1.0389402227978,0.811206315338788,0.101839363850316,0,0.758168275301024,0.420883711772948,0.130120442962704,0.689706313300419,0.360124259610698,0.452114453507145,0.408218994907967,0.640568601424249,1.03071897015702,0.517406741478031,0,0.189106080167819,0.703804496655795,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0.473489471170421,0,0.308534225774757,0.465067889500816,0.268273401399619,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0.630869845692382,1.02904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0.50925170356284,0.287696137450811,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0.3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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13178 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P43346 | |||
|association_with_transcript=0bp_to_ENSMUST00000031311_5end | |||
|cluster_id=chr5:89194008..89194020,+ | |||
|description=CAGE_peak_9_at_Dck_5end | |||
|id=chr5:89194008..89194020,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.18e-11!23;CL:0000337!1.18e-11!23;CL:0000540!2.53e-08!33;CL:0000047!2.53e-08!33;CL:0000031!2.53e-08!33;CL:0000404!2.53e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.89e-18,23;CL:0000337,4.89e-18,23;CL:0002609,7.84e-12,6;CL:0000540,1.05e-11,33;CL:0000047,1.05e-11,33;CL:0000031,1.05e-11,33;CL:0000404,1.05e-11,33;CL:0000393,1.80e-09,39;CL:0000211,1.80e-09,39;CL:0000120,2.69e-09,3;CL:0002613,8.75e-09,3;CL:0002319,2.47e-08,43;CL:0000221,4.42e-08,44;CL:0000133,4.42e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.30e-09,3;DOID:4045,9.30e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.37e-18!52;UBERON:0005068!1.37e-18!52;UBERON:0006241!1.37e-18!52;UBERON:0007135!1.37e-18!52;UBERON:0003056!7.64e-17!49;UBERON:0002346!4.63e-16!71;UBERON:0003075!4.63e-16!71;UBERON:0007284!4.63e-16!71;UBERON:0000033!1.22e-15!63;UBERON:0002616!1.91e-15!49;UBERON:0002020!2.66e-15!34;UBERON:0001017!6.31e-15!73;UBERON:0005743!6.31e-15!73;UBERON:0000153!9.44e-15!94;UBERON:0007811!1.05e-14!86;UBERON:0002780!1.08e-14!39;UBERON:0001890!1.08e-14!39;UBERON:0006240!1.08e-14!39;UBERON:0003080!1.14e-14!40;UBERON:0000955!1.14e-14!50;UBERON:0006238!1.14e-14!50;UBERON:0000073!4.42e-14!75;UBERON:0001016!4.42e-14!75;UBERON:0004121!1.44e-13!102;UBERON:0000924!1.44e-13!102;UBERON:0006601!1.44e-13!102;UBERON:0002791!3.62e-13!29;UBERON:0003528!3.62e-13!29;UBERON:0001893!3.62e-13!29;UBERON:0000956!8.81e-09!21;UBERON:0001869!8.81e-09!21;UBERON:0000203!8.81e-09!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.71e-18,29;UBERON:0002791,2.71e-18,29;UBERON:0001893,2.71e-18,29;UBERON:0002020,2.40e-17,34;UBERON:0002616,4.09e-17,46;UBERON:0000955,1.17e-16,47;UBERON:0006238,1.17e-16,47;UBERON:0001049,1.84e-16,52;UBERON:0005068,1.84e-16,52;UBERON:0006241,1.84e-16,52;UBERON:0007135,1.84e-16,52;UBERON:0000073,1.10e-15,54;UBERON:0001017,7.38e-15,73;UBERON:0002780,1.56e-14,39;UBERON:0001890,1.56e-14,39;UBERON:0006240,1.56e-14,39;UBERON:0001016,2.52e-14,75;UBERON:0003080,4.42e-14,40;UBERON:0002346,5.85e-14,64;UBERON:0003075,5.85e-14,64;UBERON:0007284,5.85e-14,64;UBERON:0003056,2.58e-12,49;UBERON:0010371,1.15e-11,73;UBERON:0000956,2.34e-11,21;UBERON:0001869,2.34e-11,21;UBERON:0000203,2.34e-11,21;UBERON:0004121,2.47e-11,95;UBERON:0000924,2.47e-11,95;UBERON:0006601,2.47e-11,95;UBERON:0000369,4.49e-09,5;UBERON:0002435,4.49e-09,5;UBERON:0000204,4.49e-09,5;UBERON:0010082,4.49e-09,5;UBERON:0002420,1.73e-08,8;UBERON:0007245,1.73e-08,8;UBERON:0010009,1.73e-08,8;UBERON:0010011,1.73e-08,8;UBERON:0000454,1.73e-08,8;UBERON:0010314,2.62e-08,92;UBERON:0002619,8.02e-07,17 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.387369970324729,0,0,0,0.0797721589953364,0.342401459862411,0.524522414513984,0,0,0.699561878128147,0.315462165358238,0.548457734422955,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,2.3440060335714,1.0470474879476,1.76469446409304,1.36609096991689,1.94204141212461,0.251793635951155,0,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0.279972843250725,0,0.167782606057736,0,0,0,0,0.515672092277442,3.03474691289397,3.1739458756322,1.26766280701236,0,0,0.899899717281399,0,0,0,0,3.31806759387129,1.89008313664367,1.89292465216244,0.856952953211411,0.883474163806454,1.71487118900936,1.34183659425531,0.919218786610021,0,0.383062014255563,0.46081959976873,1.05509030184155,1.55528994124096,2.6045668527838,1.67509799400829,0.56276261003168,0.61119299110724,1.47314292736834,0.284743361598206,0.931997229126503,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0.494389935468748,0,0,0,0,1.45462575940567,0,0.585561594023094,1.46612694769419,0,0,0,0,0.299581278809645,1.83000241127451,0.753926112677186,0.695297280769106,1.02286182932132,1.0389402227978,0.811206315338788,0.101839363850316,0,0.758168275301024,0.420883711772948,0.130120442962704,0.689706313300419,0.360124259610698,0.452114453507145,0.408218994907967,0.640568601424249,1.03071897015702,0.517406741478031,0,0.189106080167819,0.703804496655795,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0.473489471170421,0,0.308534225774757,0.465067889500816,0.268273401399619,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0.630869845692382,1.02904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0.50925170356284,0.287696137450811,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0.275936746304732,1.12385412991454,1.17211686592203,0.327869890753351,0,0.631016438832513,0,0,0.238968797952552,0.445597348164788,0.566153061577665,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0.614870295887855,0,0.363533729477506,0,0.316036757935816,1.05418608574999,0,0.680879211507576,0.540183282093931,0.258717367565509,0.428674070063185,0.354680467284547,0.713475270408282,0.329098041204242,0,0.23467170806371,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.301564624640779,0.358117032009409,0.164140899745061,0.582961673259701,0.741701208042039,0.341741761595705,0,0.185194527369712,0.188368457004691,0.410082683163076,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0.2604087696879,0.629156066554265,0.241584120826006,0,0,0.405450430580328,0.513554785824136,0.25984164595559,0.537080087002444,0.198681354781265,0.480781798079875,0.443068581523732,0.403865799792591,0.457240839929999,0.302478555410522,0.779663045918019,0.384847366561318,0.584384510907845,0,0,0.0897138566094757,0.167884616364078,0,0,0.549454872801795,0.643105137237198,0.501572104035363,2.25900737046827,0.460325236507177,1.71868654031819,0.68741272937475,0.685082519770642,1.5107877947794,1.35004500046361,0.45032120322422,0,0,0.62272408550506,1.59609949360412,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0.666740183404846,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.448176066834085,0.229741875822453,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.25384382367503,0.365855945745545,0,0.543216455383447,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.385813221962283,0.999242311751784,0,0,0.382576664137687,0.441182838239031,0.463735671240843 | |||
|short_description=p9@Dck | |||
}} |
Latest revision as of 07:37, 26 September 2015
Short description: | p9@Dck |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Dck_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000031311_5end |
EntrezGene: | Dck |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.89e-18 | 23 |
neuroblast (sensu Vertebrata) | 4.89e-18 | 23 |
neuron of cerebral cortex | 7.84e-12 | 6 |
neuron | 1.05e-11 | 33 |
neuronal stem cell | 1.05e-11 | 33 |
neuroblast | 1.05e-11 | 33 |
electrically signaling cell | 1.05e-11 | 33 |
electrically responsive cell | 1.80e-09 | 39 |
electrically active cell | 1.80e-09 | 39 |
granule cell | 2.69e-09 | 3 |
striatum neuron | 8.75e-09 | 3 |
neural cell | 2.47e-08 | 43 |
ectodermal cell | 4.42e-08 | 44 |
neurectodermal cell | 4.42e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.30e-09 | 3 |
muscle cancer | 9.30e-09 | 3 |