FFCP PHASE1:Mm9::chr1:130224888..130224903,-: Difference between revisions
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|id=chr1:130224888..130224903,-
|short_description=p1@Lct
|description=CAGE_peak_1_at_Lct_5end
|association_with_transcript=0bp_to_ENSMUST00000073490,NM_001081078,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=226413 | |EntrezGene=226413 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=217 | |||
|TSSclassifier=NA | |||
|UniProt=F8VPT3,Q3TZ78 | |UniProt=F8VPT3,Q3TZ78 | ||
|association_with_transcript=0bp_to_ENSMUST00000073490,NM_001081078,uc007clm.1_5end | |||
|cluster_id=chr1:130224888..130224903,- | |||
|description=CAGE_peak_1_at_Lct_5end | |||
|id=chr1:130224888..130224903,- | |||
|ontology_enrichment_celltype=CL:0002563!4.45e-08!9;CL:0002251!4.45e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.42e-09,9;CL:0002251,7.42e-09,9;CL:0000239,2.61e-07,6;CL:0000677,2.61e-07,6;CL:0000584,2.61e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.29e-19!59;UBERON:0000160!1.67e-18!43;UBERON:0000344!1.62e-11!15;UBERON:0001242!1.16e-09!13;UBERON:0000060!1.16e-09!13;UBERON:0001262!1.16e-09!13;UBERON:0004786!1.16e-09!13;UBERON:0003350!4.45e-08!9;UBERON:0004808!4.45e-08!9;UBERON:0001277!4.45e-08!9;UBERON:0004923!2.21e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.62e-27,31;UBERON:0005409,4.65e-24,47;UBERON:0000344,9.06e-13,15;UBERON:0001242,1.08e-10,13;UBERON:0001262,1.08e-10,13;UBERON:0004786,1.08e-10,13;UBERON:0003350,7.42e-09,9;UBERON:0004808,7.42e-09,9;UBERON:0001277,7.42e-09,9;UBERON:0000485,6.89e-07,11 | |||
|phase1_expression=0,428.890775988775,281.189529942733,664.816336452412,578.033672358085,16.9558064631009,13.315920513945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,179.191513528615,140.857298575242,322.718363832641,239.934431860605,198.233534071018,5.51067916423484,352.086091274623,0,0,0,0,1.44425809875637,13.7974755647549,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.3404334794201,0,0,0,0,0,0,0,0,0,0,174.016232691847,0,0,0,0,0.230615497256059,0,0,3.64433114856059,0,0,0,0,0,0,1.86391761218122,0,0,883.1150398561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,2081.96875158091,616.698721459385,0,0,19.7167215822803,396.913176458738,782.770714333943,1091.89509388609,1662.74983165197,1364.53083988843,1177.50545322926,1276.90263756011,1233.14785102843,1644.83951783723,1644.37828344667,1614.2391609999,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,5.0925170356284,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0.906970670894253,0,0,0.307435147943927,260.754147806735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.6839361646504,0,0,0,0,0,1817.38301638712,0,0,0.206386867963223,0.925972636848558,0,0,0,0,0,0,0,0,1.21991680276109,37.8018692876304,21.3270061934758,118.789234677921,14.4304850631758,8.5133059397096,2.35580347785627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45864030240976,0.209613162627982,9.37601893095072,59.5621230508329,53.5691148821125,74.4532566253011,50.7921395645233,65.6511386715721,52.8153755881013,49.7236404665076,50.1316943330126,48.0160520468927,45.7241943631751,44.2678125109348,39.7392994155232,49.4503080963968,49.1644393248887,56.2305573912081,48.6283708876585,42.4416418106231,52.0340171543736,50.5367372830325,52.2918276770561,52.6832561873585,53.4031514218821,52.1487797168109,56.1142271657738,47.2167372134213,44.4255215513791,40.9231043169689,48.8051049735793,33.1799370887563,0,67.1383716238322,81.0063873762085,0,0,0 | |phase1_expression=0,428.890775988775,281.189529942733,664.816336452412,578.033672358085,16.9558064631009,13.315920513945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,179.191513528615,140.857298575242,322.718363832641,239.934431860605,198.233534071018,5.51067916423484,352.086091274623,0,0,0,0,1.44425809875637,13.7974755647549,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.3404334794201,0,0,0,0,0,0,0,0,0,0,174.016232691847,0,0,0,0,0.230615497256059,0,0,3.64433114856059,0,0,0,0,0,0,1.86391761218122,0,0,883.1150398561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,2081.96875158091,616.698721459385,0,0,19.7167215822803,396.913176458738,782.770714333943,1091.89509388609,1662.74983165197,1364.53083988843,1177.50545322926,1276.90263756011,1233.14785102843,1644.83951783723,1644.37828344667,1614.2391609999,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,5.0925170356284,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0.906970670894253,0,0,0.307435147943927,260.754147806735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.6839361646504,0,0,0,0,0,1817.38301638712,0,0,0.206386867963223,0.925972636848558,0,0,0,0,0,0,0,0,1.21991680276109,37.8018692876304,21.3270061934758,118.789234677921,14.4304850631758,8.5133059397096,2.35580347785627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45864030240976,0.209613162627982,9.37601893095072,59.5621230508329,53.5691148821125,74.4532566253011,50.7921395645233,65.6511386715721,52.8153755881013,49.7236404665076,50.1316943330126,48.0160520468927,45.7241943631751,44.2678125109348,39.7392994155232,49.4503080963968,49.1644393248887,56.2305573912081,48.6283708876585,42.4416418106231,52.0340171543736,50.5367372830325,52.2918276770561,52.6832561873585,53.4031514218821,52.1487797168109,56.1142271657738,47.2167372134213,44.4255215513791,40.9231043169689,48.8051049735793,33.1799370887563,0,67.1383716238322,81.0063873762085,0,0,0 | ||
|short_description=p1@Lct | |||
}} | }} |
Latest revision as of 07:37, 26 September 2015
Short description: | p1@Lct |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lct_5end |
Coexpression cluster: | MCL_coexpression_mm9:217 |
Association with transcript: | 0bp_to_ENSMUST00000073490, NM_001081078, uc007clm.1_5end |
EntrezGene: | Lct |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.42e-09 | 9 |
epithelial cell of alimentary canal | 7.42e-09 | 9 |
brush border epithelial cell | 2.61e-07 | 6 |
gut absorptive cell | 2.61e-07 | 6 |
enterocyte | 2.61e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.62e-27 | 31 |
gastrointestinal system | 4.65e-24 | 47 |
mucosa | 9.06e-13 | 15 |
intestinal mucosa | 1.08e-10 | 13 |
wall of intestine | 1.08e-10 | 13 |
gastrointestinal system mucosa | 1.08e-10 | 13 |
epithelium of mucosa | 7.42e-09 | 9 |
gastrointestinal system epithelium | 7.42e-09 | 9 |
intestinal epithelium | 7.42e-09 | 9 |
simple columnar epithelium | 6.89e-07 | 11 |