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FFCP PHASE1:Mm9::chr7:17502981..17502996,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12313,12314,12315
|EntrezGene=12313,12314,12315
|HGNC=
|HGNC=
|MCL_coexpression_id=741
|TSSclassifier=NA
|UniProt=G3UZ90
|UniProt=G3UZ90
|association_with_transcript=-429bp_to_ENSMUST00000173139_5end
|association_with_transcript=-429bp_to_ENSMUST00000173139_5end
|cluster_id=chr7:17502981..17502996,-
|description=CAGE_peak_10_at_Calm3_5end,CAGE_peak_11_at_Calm1_5end,CAGE_peak_9_at_Calm2_5end
|description=CAGE_peak_10_at_Calm3_5end,CAGE_peak_11_at_Calm1_5end,CAGE_peak_9_at_Calm2_5end
|id=chr7:17502981..17502996,-
|id=chr7:17502981..17502996,-
|ontology_enrichment_celltype=CL:0000117!3.09e-13!23;CL:0000337!3.09e-13!23;CL:0000055!7.22e-13!50;CL:0002319!7.54e-13!43;CL:0000221!8.57e-13!44;CL:0000133!8.57e-13!44;CL:0000393!1.34e-11!39;CL:0000211!1.34e-11!39;CL:0000540!7.86e-11!33;CL:0000047!7.86e-11!33;CL:0000031!7.86e-11!33;CL:0000404!7.86e-11!33;CL:0002321!1.20e-08!70;CL:0000220!1.20e-08!70;CL:0000723!6.34e-07!91;CL:0000048!6.34e-07!91
|ontology_enrichment_celltype_v019_2=CL:0000117,7.13e-24,23;CL:0000337,7.13e-24,23;CL:0002319,1.13e-20,43;CL:0000221,5.45e-20,44;CL:0000133,5.45e-20,44;CL:0000540,2.19e-17,33;CL:0000047,2.19e-17,33;CL:0000031,2.19e-17,33;CL:0000404,2.19e-17,33;CL:0000393,3.31e-16,39;CL:0000211,3.31e-16,39;CL:0002321,7.71e-12,70;CL:0000723,1.72e-11,91;CL:0000048,1.72e-11,91;CL:0000034,3.97e-10,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.31e-22!73;UBERON:0005743!2.31e-22!73;UBERON:0000073!5.72e-22!75;UBERON:0001016!5.72e-22!75;UBERON:0001049!4.43e-19!52;UBERON:0005068!4.43e-19!52;UBERON:0006241!4.43e-19!52;UBERON:0007135!4.43e-19!52;UBERON:0000955!3.51e-18!50;UBERON:0006238!3.51e-18!50;UBERON:0002020!4.38e-18!34;UBERON:0002616!5.42e-18!49;UBERON:0002791!6.89e-15!29;UBERON:0003528!6.89e-15!29;UBERON:0001893!6.89e-15!29;UBERON:0000033!3.05e-14!63;UBERON:0003080!5.86e-14!40;UBERON:0002780!1.33e-13!39;UBERON:0001890!1.33e-13!39;UBERON:0006240!1.33e-13!39;UBERON:0004121!2.59e-13!102;UBERON:0000924!2.59e-13!102;UBERON:0006601!2.59e-13!102;UBERON:0002346!9.67e-12!71;UBERON:0003075!9.67e-12!71;UBERON:0007284!9.67e-12!71;UBERON:0000956!1.42e-11!21;UBERON:0001869!1.42e-11!21;UBERON:0000203!1.42e-11!21;UBERON:0003056!6.49e-11!49;UBERON:0002619!8.07e-10!17;UBERON:0007811!3.51e-08!86;UBERON:0000153!6.42e-08!94;UBERON:0002021!1.94e-07!10;UBERON:0000411!1.94e-07!10;UBERON:0001950!1.94e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.10e-30,73;UBERON:0002020,1.36e-29,34;UBERON:0000073,5.55e-29,54;UBERON:0001016,9.11e-29,75;UBERON:0001049,1.08e-24,52;UBERON:0005068,1.08e-24,52;UBERON:0006241,1.08e-24,52;UBERON:0007135,1.08e-24,52;UBERON:0003528,3.33e-23,29;UBERON:0002791,3.33e-23,29;UBERON:0001893,3.33e-23,29;UBERON:0004121,8.76e-20,95;UBERON:0000924,8.76e-20,95;UBERON:0006601,8.76e-20,95;UBERON:0002616,1.09e-19,46;UBERON:0000955,4.55e-19,47;UBERON:0006238,4.55e-19,47;UBERON:0003080,8.12e-19,40;UBERON:0000956,9.05e-19,21;UBERON:0001869,9.05e-19,21;UBERON:0000203,9.05e-19,21;UBERON:0002780,4.01e-18,39;UBERON:0001890,4.01e-18,39;UBERON:0006240,4.01e-18,39;UBERON:0002346,5.34e-18,64;UBERON:0003075,5.34e-18,64;UBERON:0007284,5.34e-18,64;UBERON:0002619,3.82e-15,17;UBERON:0010371,1.83e-14,73;UBERON:0003056,8.10e-14,49;UBERON:0002021,8.03e-12,10;UBERON:0000411,8.03e-12,10;UBERON:0001950,8.03e-12,10;UBERON:0010314,7.15e-11,92;UBERON:0001948,1.03e-07,5;UBERON:0002315,1.03e-07,5;UBERON:0000025,1.95e-07,114
|phase1_expression=0.160148847104794,0.348975407639361,0,0.90739263392049,0.500895729946347,0.503637815735669,0.934450562382103,0.258246646883153,0.140788722151667,0,0,0,0.342401459862411,0.174840804837995,1.33243904726265,0.404950534779652,1.39912375625629,0.473193248037357,0.411343300817216,0,0.850432901510698,0.397163804803541,0.261199789138935,1.27993938234725,0.91763712426868,0,0,0.646413698057667,3.42042155021473,1.26015064879965,0.665191531965914,0.635030673459631,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0,2.3440060335714,1.57057123192139,1.76469446409304,0.683045484958446,0,0.629484089877886,0.405507724878058,0.367093504323363,0.782391344348039,1.74420125104357,1.5378032791413,1.94429899074283,1.95980990275508,0,0,0,0.672187598284928,1.54355661621568,0.573066879877513,1.03134418455488,1.41621522601718,2.64495489636016,2.53532561402472,1.69422266034566,2.66788438833342,0.449949858640699,0.988866362566974,0,2.99600110518405,4.61061966385865,1.03689612308478,2.8351247049655,1.89292465216244,3.42781181284564,5.52171352379034,1.10241719293459,1.15014565221884,0.919218786610021,4.40463523997555,2.29837208553338,3.37934373163736,1.71452174049252,4.48289453651807,1.04182674111352,4.4669279840221,2.25105044012672,3.0559649555362,1.76777151284201,5.97961059356232,2.23679334990361,0.454357159999104,0.226714680320357,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0.511290967734173,1.81850203222008,0.70667914902068,0.422530259330042,1.28326477414318,0,0,0,0,0,0.5709193985953,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0.60289056221049,0.352766121407114,0.125666591329675,0,0,0.884610551949874,0,0.441683036920787,0.484875253135222,3.72783522436244,0.585561594023094,3.14170060220183,1.02182822083437,1.43778149407104,0,0.381210681219194,1.04853447583376,0.457500602818626,0.753926112677186,1.21677024134594,1.02286182932132,0.62336413367868,1.46017136760982,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.272145996605311,0.12811372028485,0.468508622798644,0.517406741478031,0,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,1.0447564995665,0.411564272815887,0.199034266818493,0,0.257347907114715,1.13665399758237,0,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0,0.329119699826961,0.656669856316381,0.162137619091711,0.584799949701329,0.439100230582101,0.134206418760372,1.05144974282064,1.02904612379284,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0.329397909448022,0.754005626400808,0.596869416123452,0.58489226135736,0,0.432276099749388,0.597423819763102,0.189667900953082,0,0,0.407302655690628,0,0.350679099451593,0.189709611372772,0.147610147979602,0,0.246794327843601,0,0,0,0.674586337154561,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0.505157755894224,0.358794827043824,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0.469380496577004,0.502518772325447,0,0.195133647857799,0.472905432318573,0.44292937929755,0.478364305972461,0.163863314715738,0,0,1.50791283939272,1.08781136763742,0,0,0.80275294993896,1.28932855251423,0.655739781506702,0.252470927204373,0.631016438832513,0,0,0.477937595905104,1.11399337041197,0.849229592366497,0.404810701674894,1.16902343164525,0.395287777946524,0.642642632843614,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0.295301892880773,0.614870295887855,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.900305470156551,0.258717367565509,0.643011105094777,1.24138163549592,0.356737635204141,0,0.913394847343798,0,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.358117032009409,0.328281799490123,0.582961673259701,0.370850604021019,0.512612642393558,0.206386867963223,0,0.565105371014073,0.136694227721025,0.457556346413045,0.169978429993855,0.419854356970974,0.552799895217695,0,0.316335993581135,0.203319467126849,0.216010681643603,0.836353184057875,0.218362563746178,0,0.247960367176008,0.523511883968059,0,0.621339313086926,2.25477175473676,0.149516546043979,0,0,0.516639293910924,0.168956125490778,0.117357238645754,0.2604087696879,0.419437377702843,1.44950472495604,1.44015003128933,0.316011120628178,0.810900861160657,0.308132871494482,0.25984164595559,0.179026695667481,0.39736270956253,0.480781798079875,0.147689527174577,0.100966449948148,0.381034033274999,0.403304740547362,0,0.192423683280659,0,0.226730383615211,0,0.0897138566094757,0.503653849092235,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,3.3885110557024,4.60325236507177,6.30185064783336,3.09335728218638,2.74033007908257,5.2877572817279,4.05013500139084,4.95353323546643,0.906284817968409,4.14208249401456,0.415149390336707,1.19707462020309,0.512200817262403,0,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0.253479299890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|short_description=p10@Calm3,p11@Calm1,p9@Calm2
|short_description=p10@Calm3,p11@Calm1,p9@Calm2
}}
}}

Latest revision as of 07:22, 26 September 2015

Short description:p10@Calm3, p11@Calm1, p9@Calm2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_10_at_Calm3_5end, CAGE_peak_11_at_Calm1_5end, CAGE_peak_9_at_Calm2_5end
Coexpression cluster:MCL_coexpression_mm9:741
Association with transcript: -429bp_to_ENSMUST00000173139_5end
EntrezGene:12313,12314,12315
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p10@Calm3p11@Calm1p9@Calm2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.13e-2423
neuroblast (sensu Vertebrata)7.13e-2423
neural cell1.13e-2043
ectodermal cell5.45e-2044
neurectodermal cell5.45e-2044
neuron2.19e-1733
neuronal stem cell2.19e-1733
neuroblast2.19e-1733
electrically signaling cell2.19e-1733
electrically responsive cell3.31e-1639
electrically active cell3.31e-1639
embryonic cell7.71e-1270
somatic stem cell1.72e-1191
multi fate stem cell1.72e-1191
stem cell3.97e-1097

Uber anatomy
Ontology termp-valuen
central nervous system6.10e-3073
gray matter1.36e-2934
regional part of nervous system5.55e-2954
nervous system9.11e-2975
neural tube1.08e-2452
neural rod1.08e-2452
future spinal cord1.08e-2452
neural keel1.08e-2452
brain grey matter3.33e-2329
regional part of telencephalon3.33e-2329
telencephalon3.33e-2329
ectoderm-derived structure8.76e-2095
ectoderm8.76e-2095
presumptive ectoderm8.76e-2095
regional part of brain1.09e-1946
brain4.55e-1947
future brain4.55e-1947
anterior neural tube8.12e-1940
cerebral cortex9.05e-1921
cerebral hemisphere9.05e-1921
pallium9.05e-1921
regional part of forebrain4.01e-1839
forebrain4.01e-1839
future forebrain4.01e-1839
neurectoderm5.34e-1864
neural plate5.34e-1864
presumptive neural plate5.34e-1864
regional part of cerebral cortex3.82e-1517
ecto-epithelium1.83e-1473
pre-chordal neural plate8.10e-1449
occipital lobe8.03e-1210
visual cortex8.03e-1210
neocortex8.03e-1210
structure with developmental contribution from neural crest7.15e-1192
regional part of spinal cord1.03e-075
gray matter of spinal cord1.03e-075
tube1.95e-07114
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