FFCP PHASE1:Mm9::chr12:109513619..109513627,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=668158 | |EntrezGene=668158 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q6B2 | |UniProt=E9Q6B2 | ||
|association_with_transcript=0bp_to_ENSMUST00000136175,NM_001159910,uc011yrs.1_5end | |association_with_transcript=0bp_to_ENSMUST00000136175,NM_001159910,uc011yrs.1_5end | ||
|cluster_id=chr12:109513619..109513627,- | |||
|description=CAGE_peak_4_at_Ccdc85c_5end | |description=CAGE_peak_4_at_Ccdc85c_5end | ||
|id=chr12:109513619..109513627,- | |id=chr12:109513619..109513627,- | ||
|ontology_enrichment_celltype=CL:0000117!1.57e-13!23;CL:0000337!1.57e-13!23;CL:0000540!8.34e-10!33;CL:0000047!8.34e-10!33;CL:0000031!8.34e-10!33;CL:0000404!8.34e-10!33;CL:0000221!1.02e-09!44;CL:0000133!1.02e-09!44;CL:0002319!1.76e-09!43;CL:0000393!6.70e-08!39;CL:0000211!6.70e-08!39;CL:0000055!2.17e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.57e-13!23;CL:0000337!1.57e-13!23;CL:0000540!8.34e-10!33;CL:0000047!8.34e-10!33;CL:0000031!8.34e-10!33;CL:0000404!8.34e-10!33;CL:0000221!1.02e-09!44;CL:0000133!1.02e-09!44;CL:0002319!1.76e-09!43;CL:0000393!6.70e-08!39;CL:0000211!6.70e-08!39;CL:0000055!2.17e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.94e-32,23;CL:0000337,8.94e-32,23;CL:0000540,2.44e-22,33;CL:0000047,2.44e-22,33;CL:0000031,2.44e-22,33;CL:0000404,2.44e-22,33;CL:0002319,4.25e-19,43;CL:0000221,1.65e-18,44;CL:0000133,1.65e-18,44;CL:0000393,6.23e-18,39;CL:0000211,6.23e-18,39;CL:0002321,4.40e-11,70;CL:0002609,2.93e-10,6;CL:0002610,5.44e-07,3;CL:0002614,6.46e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.41e-20!71;UBERON:0003075!1.41e-20!71;UBERON:0007284!1.41e-20!71;UBERON:0001017!1.10e-19!73;UBERON:0005743!1.10e-19!73;UBERON:0004121!1.37e-19!102;UBERON:0000924!1.37e-19!102;UBERON:0006601!1.37e-19!102;UBERON:0001049!2.62e-19!52;UBERON:0005068!2.62e-19!52;UBERON:0006241!2.62e-19!52;UBERON:0007135!2.62e-19!52;UBERON:0000073!1.01e-18!75;UBERON:0001016!1.01e-18!75;UBERON:0000033!1.89e-18!63;UBERON:0000955!2.74e-18!50;UBERON:0006238!2.74e-18!50;UBERON:0002616!1.07e-17!49;UBERON:0003056!5.30e-14!49;UBERON:0002020!1.69e-13!34;UBERON:0003080!9.17e-13!40;UBERON:0002780!3.28e-12!39;UBERON:0001890!3.28e-12!39;UBERON:0006240!3.28e-12!39;UBERON:0007811!5.49e-12!86;UBERON:0002791!1.14e-10!29;UBERON:0003528!1.14e-10!29;UBERON:0001893!1.14e-10!29;UBERON:0000153!2.14e-09!94;UBERON:0000025!4.85e-09!114;UBERON:0004111!1.29e-08!122;UBERON:0000483!2.58e-08!181;UBERON:0000119!3.27e-08!183;UBERON:0003076!1.30e-07!12;UBERON:0003057!1.30e-07!12;UBERON:0000956!5.52e-07!21;UBERON:0001869!5.52e-07!21;UBERON:0000203!5.52e-07!21 | |ontology_enrichment_uberon=UBERON:0002346!1.41e-20!71;UBERON:0003075!1.41e-20!71;UBERON:0007284!1.41e-20!71;UBERON:0001017!1.10e-19!73;UBERON:0005743!1.10e-19!73;UBERON:0004121!1.37e-19!102;UBERON:0000924!1.37e-19!102;UBERON:0006601!1.37e-19!102;UBERON:0001049!2.62e-19!52;UBERON:0005068!2.62e-19!52;UBERON:0006241!2.62e-19!52;UBERON:0007135!2.62e-19!52;UBERON:0000073!1.01e-18!75;UBERON:0001016!1.01e-18!75;UBERON:0000033!1.89e-18!63;UBERON:0000955!2.74e-18!50;UBERON:0006238!2.74e-18!50;UBERON:0002616!1.07e-17!49;UBERON:0003056!5.30e-14!49;UBERON:0002020!1.69e-13!34;UBERON:0003080!9.17e-13!40;UBERON:0002780!3.28e-12!39;UBERON:0001890!3.28e-12!39;UBERON:0006240!3.28e-12!39;UBERON:0007811!5.49e-12!86;UBERON:0002791!1.14e-10!29;UBERON:0003528!1.14e-10!29;UBERON:0001893!1.14e-10!29;UBERON:0000153!2.14e-09!94;UBERON:0000025!4.85e-09!114;UBERON:0004111!1.29e-08!122;UBERON:0000483!2.58e-08!181;UBERON:0000119!3.27e-08!183;UBERON:0003076!1.30e-07!12;UBERON:0003057!1.30e-07!12;UBERON:0000956!5.52e-07!21;UBERON:0001869!5.52e-07!21;UBERON:0000203!5.52e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.87e-33,54;UBERON:0001017,3.29e-31,73;UBERON:0001016,4.24e-30,75;UBERON:0001049,6.01e-30,52;UBERON:0005068,6.01e-30,52;UBERON:0006241,6.01e-30,52;UBERON:0007135,6.01e-30,52;UBERON:0002020,1.06e-24,34;UBERON:0002346,2.30e-24,64;UBERON:0003075,2.30e-24,64;UBERON:0007284,2.30e-24,64;UBERON:0004121,5.15e-23,95;UBERON:0000924,5.15e-23,95;UBERON:0006601,5.15e-23,95;UBERON:0000955,5.78e-23,47;UBERON:0006238,5.78e-23,47;UBERON:0002616,1.09e-21,46;UBERON:0010371,3.10e-20,73;UBERON:0010314,1.21e-18,92;UBERON:0003080,4.30e-18,40;UBERON:0003528,8.31e-18,29;UBERON:0002791,8.31e-18,29;UBERON:0001893,8.31e-18,29;UBERON:0002780,7.21e-17,39;UBERON:0001890,7.21e-17,39;UBERON:0006240,7.21e-17,39;UBERON:0003056,4.39e-15,49;UBERON:0003076,4.01e-13,12;UBERON:0003057,4.01e-13,12;UBERON:0000025,3.55e-12,114;UBERON:0000956,4.44e-11,21;UBERON:0001869,4.44e-11,21;UBERON:0000203,4.44e-11,21;UBERON:0004111,9.08e-11,122;UBERON:0002240,1.15e-10,6;UBERON:0005174,1.15e-10,6;UBERON:0001137,1.15e-10,6;UBERON:0001948,6.08e-09,5;UBERON:0002315,6.08e-09,5;UBERON:0002950,2.26e-08,4;UBERON:0001891,2.26e-08,4;UBERON:0009616,2.26e-08,4;UBERON:0010286,2.26e-08,4;UBERON:0002420,2.80e-08,8;UBERON:0007245,2.80e-08,8;UBERON:0010009,2.80e-08,8;UBERON:0010011,2.80e-08,8;UBERON:0000454,2.80e-08,8;UBERON:0011216,4.12e-07,194;UBERON:0004684,5.44e-07,3;UBERON:0002275,5.44e-07,3;UBERON:0002038,6.46e-07,3;UBERON:0009663,6.46e-07,3;UBERON:0009661,6.46e-07,3;UBERON:0000125,6.46e-07,3;UBERON:0002308,6.46e-07,3 | |||
|phase1_expression=0.960893082628764,0,0,1.20985684522732,0.500895729946347,0.671517087647559,0.233612640595526,0,0.140788722151667,0.234064526321993,0.171217968225505,0,0.171200729931206,0,0,0,0,0,0,0,1.02051948181284,0.297872853602656,0.261199789138935,0.47997726838022,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,0.288851619751275,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0,0.101376931219515,0,2.34717403304412,0.872100625521786,0.439372365468944,1.1665793944457,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0.404632921719196,3.70293685490423,1.90149421051854,0.677689064138264,0,0,0,0.7104801149461,0.898800331555214,0.768436610643109,1.24427534770173,2.97013064329719,1.47227472945967,1.99955689082663,1.76694832761291,1.34739879136449,1.72521847832825,3.67687514644008,2.20231761998777,4.59674417106676,3.84016333140609,0.395658863190582,1.55528994124096,2.08365348222704,3.90856198601933,3.37657566019008,2.29197371665215,1.47314292736834,1.85083185038834,1.4911955666024,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0.649776417447669,0,1.82577746171277,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.506719730950197,0,0.34255163915718,0,0.29688427812965,0.867426633830679,0.608930956624282,0.922461989024234,0.301445281105245,0.352766121407114,0.502666365318702,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0.878342391034642,2.09446706813455,0.255457055208591,0.239630249011841,0,0,1.64769703345305,0.915001205637253,1.63350657746724,1.56441888173049,1.53429274398198,1.45451631191692,1.94689515681309,0.407357455401265,0,0,0.420883711772948,0.910843100738926,0.689706313300419,0.900310649026746,0.452114453507145,1.56483948048054,0.896796041993948,0.843315521037559,0,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.414251545071004,1.17263029990548,0.900310307305074,0.710234206755631,0,0.308534225774757,0.697601834251224,1.3413670069981,0.583826711835847,0.822799249567402,0.820837320395476,1.13496333364198,1.16959989940266,0.439100230582101,0.939444931322602,0.630869845692382,0.720332286654991,0.660837565967596,0.264450566663544,0.639864751605702,0.696710015581316,0.515469845288373,0.403367049246685,0.444756087689741,0.380451252225118,1.42358718463353,0,0.251335208800269,0,0.58489226135736,0,0.648414149624083,0.199141273254367,0.948339504765408,0.342745537829186,1.1270773567308,0.610953983535943,0.581857461502877,0.98190147846446,0.569128834118316,0.738050739898011,0,0.493588655687202,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,0.554259570499814,0.37898282354097,0.488894929326078,0.169745085775188,0,0.670025029767263,0,0.780534591431195,0.315270288212382,0.44292937929755,0.159454768657487,0,0.345369963731791,0.433947175744535,0,0,0.491764273019036,0.551873492609465,1.12385412991454,1.28932855251423,0.655739781506702,0.757412781613119,0,0.780877488593277,0.646270193198397,0,0.222798674082394,1.41538265394416,0,0,0.395287777946524,1.60660658210904,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0.728341908464944,0.302323556964751,0.754420319023592,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,0.36012218806262,0.905510786479282,0.428674070063185,0.354680467284547,0.535106452806212,0.658196082408484,1.8267896946876,0,0,0,0.16488625294148,0.484393280087717,0.482503399425247,0.119372344003136,0.820704498725306,0.291480836629851,2.41052892613663,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0.228778173206523,0.169978429993855,0,0,0,0.474503990371703,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.330613822901344,0,0.648074866458964,0,0,0.448549638131936,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,0.209718688851422,0,0.288030006257865,0,0.810900861160657,0.513554785824136,0.25984164595559,0.537080087002444,0.198681354781265,0.480781798079875,0.590758108698309,0.302899349844443,0.457240839929999,0.201652370273681,0.38983152295901,0.288635524920988,0.350630706544707,0,0.221985953374065,0.179427713218951,0,0.772758376128762,0.563047426353546,0.36630324853453,0.214368379079066,0.501572104035363,1.6942555278512,1.38097570952153,0,0.859265911718438,0,1.5107877947794,1.35004500046361,0.900642406448441,0.453142408984205,3.62432218226274,0.726511433089237,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0.758091635291392,0,0,0.0936415074698824,0.448176066834085,0.34461281373368,0.952587382566147,0.463537303779422,0,0.412085900803307,0,0,0,0.476872379894642,0.145346416632329,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0,0.593175090620871,0.197008964751127,1.22769312950907,0.464810523557898,0,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0 | |phase1_expression=0.960893082628764,0,0,1.20985684522732,0.500895729946347,0.671517087647559,0.233612640595526,0,0.140788722151667,0.234064526321993,0.171217968225505,0,0.171200729931206,0,0,0,0,0,0,0,1.02051948181284,0.297872853602656,0.261199789138935,0.47997726838022,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,0.288851619751275,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0,0.101376931219515,0,2.34717403304412,0.872100625521786,0.439372365468944,1.1665793944457,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0.404632921719196,3.70293685490423,1.90149421051854,0.677689064138264,0,0,0,0.7104801149461,0.898800331555214,0.768436610643109,1.24427534770173,2.97013064329719,1.47227472945967,1.99955689082663,1.76694832761291,1.34739879136449,1.72521847832825,3.67687514644008,2.20231761998777,4.59674417106676,3.84016333140609,0.395658863190582,1.55528994124096,2.08365348222704,3.90856198601933,3.37657566019008,2.29197371665215,1.47314292736834,1.85083185038834,1.4911955666024,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0.649776417447669,0,1.82577746171277,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.506719730950197,0,0.34255163915718,0,0.29688427812965,0.867426633830679,0.608930956624282,0.922461989024234,0.301445281105245,0.352766121407114,0.502666365318702,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0.878342391034642,2.09446706813455,0.255457055208591,0.239630249011841,0,0,1.64769703345305,0.915001205637253,1.63350657746724,1.56441888173049,1.53429274398198,1.45451631191692,1.94689515681309,0.407357455401265,0,0,0.420883711772948,0.910843100738926,0.689706313300419,0.900310649026746,0.452114453507145,1.56483948048054,0.896796041993948,0.843315521037559,0,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.414251545071004,1.17263029990548,0.900310307305074,0.710234206755631,0,0.308534225774757,0.697601834251224,1.3413670069981,0.583826711835847,0.822799249567402,0.820837320395476,1.13496333364198,1.16959989940266,0.439100230582101,0.939444931322602,0.630869845692382,0.720332286654991,0.660837565967596,0.264450566663544,0.639864751605702,0.696710015581316,0.515469845288373,0.403367049246685,0.444756087689741,0.380451252225118,1.42358718463353,0,0.251335208800269,0,0.58489226135736,0,0.648414149624083,0.199141273254367,0.948339504765408,0.342745537829186,1.1270773567308,0.610953983535943,0.581857461502877,0.98190147846446,0.569128834118316,0.738050739898011,0,0.493588655687202,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,0.554259570499814,0.37898282354097,0.488894929326078,0.169745085775188,0,0.670025029767263,0,0.780534591431195,0.315270288212382,0.44292937929755,0.159454768657487,0,0.345369963731791,0.433947175744535,0,0,0.491764273019036,0.551873492609465,1.12385412991454,1.28932855251423,0.655739781506702,0.757412781613119,0,0.780877488593277,0.646270193198397,0,0.222798674082394,1.41538265394416,0,0,0.395287777946524,1.60660658210904,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0.728341908464944,0.302323556964751,0.754420319023592,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,0.36012218806262,0.905510786479282,0.428674070063185,0.354680467284547,0.535106452806212,0.658196082408484,1.8267896946876,0,0,0,0.16488625294148,0.484393280087717,0.482503399425247,0.119372344003136,0.820704498725306,0.291480836629851,2.41052892613663,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0.228778173206523,0.169978429993855,0,0,0,0.474503990371703,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.330613822901344,0,0.648074866458964,0,0,0.448549638131936,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,0.209718688851422,0,0.288030006257865,0,0.810900861160657,0.513554785824136,0.25984164595559,0.537080087002444,0.198681354781265,0.480781798079875,0.590758108698309,0.302899349844443,0.457240839929999,0.201652370273681,0.38983152295901,0.288635524920988,0.350630706544707,0,0.221985953374065,0.179427713218951,0,0.772758376128762,0.563047426353546,0.36630324853453,0.214368379079066,0.501572104035363,1.6942555278512,1.38097570952153,0,0.859265911718438,0,1.5107877947794,1.35004500046361,0.900642406448441,0.453142408984205,3.62432218226274,0.726511433089237,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0.758091635291392,0,0,0.0936415074698824,0.448176066834085,0.34461281373368,0.952587382566147,0.463537303779422,0,0.412085900803307,0,0,0,0.476872379894642,0.145346416632329,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0,0.593175090620871,0.197008964751127,1.22769312950907,0.464810523557898,0,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0 | ||
|short_description=p4@Ccdc85c | |short_description=p4@Ccdc85c | ||
}} | }} |
Latest revision as of 06:51, 26 September 2015
Short description: | p4@Ccdc85c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ccdc85c_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000136175, NM_001159910, uc011yrs.1_5end |
EntrezGene: | Ccdc85c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.94e-32 | 23 |
neuroblast (sensu Vertebrata) | 8.94e-32 | 23 |
neuron | 2.44e-22 | 33 |
neuronal stem cell | 2.44e-22 | 33 |
neuroblast | 2.44e-22 | 33 |
electrically signaling cell | 2.44e-22 | 33 |
neural cell | 4.25e-19 | 43 |
ectodermal cell | 1.65e-18 | 44 |
neurectodermal cell | 1.65e-18 | 44 |
electrically responsive cell | 6.23e-18 | 39 |
electrically active cell | 6.23e-18 | 39 |
embryonic cell | 4.40e-11 | 70 |
neuron of cerebral cortex | 2.93e-10 | 6 |
raphe nuclei neuron | 5.44e-07 | 3 |
neuron of the substantia nigra | 6.46e-07 | 3 |