FFCP PHASE1:Mm9::chr4:116666344..116666359,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=22275|HGNC=|MCL_coexpression_id=164|UniProt=|association_with_transcript=-42bp_to_uc008uhs.1_5end|description=CAGE_peak_3_at_Urod_5end|id=chr4:116666344..116666359,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,5.23e-07,3;CL:0002006,5.23e-07,3;CL:0002024,5.23e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!1.16e-07!6;UBERON:0004457!1.16e-07!6;UBERON:0000042!1.16e-07!6;UBERON:0004854!1.16e-07!6;UBERON:0009034!1.16e-07!6;UBERON:0002095!1.16e-07!6;UBERON:0004782!1.16e-07!6;UBERON:0003281!1.16e-07!6;UBERON:0009664!1.16e-07!6;UBERON:0002296!1.16e-07!6;UBERON:0005602!1.16e-07!6;UBERON:0001179!1.16e-07!6;UBERON:0006293!1.16e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.03e-25,6;UBERON:0004457,1.03e-25,6;UBERON:0000042,1.03e-25,6;UBERON:0004854,1.03e-25,6;UBERON:0009034,1.03e-25,6;UBERON:0002095,1.03e-25,6;UBERON:0004782,1.03e-25,6;UBERON:0003281,1.03e-25,6;UBERON:0009664,1.03e-25,6;UBERON:0002296,1.03e-25,6;UBERON:0005602,1.03e-25,6;UBERON:0001179,1.03e-25,6;UBERON:0006293,1.03e-25,6;UBERON:0005172,6.64e-16,49;UBERON:0005173,6.64e-16,49;UBERON:0002417,6.64e-16,49;UBERON:0000916,6.64e-16,49;UBERON:0003887,2.77e-15,10;UBERON:0002107,1.36e-12,22;UBERON:0007499,1.36e-12,22;UBERON:0006925,1.36e-12,22;UBERON:0009497,1.36e-12,22;UBERON:0000015,1.36e-12,22;UBERON:0002423,1.36e-12,22;UBERON:0006235,1.36e-12,22;UBERON:0008835,1.36e-12,22;UBERON:0003894,1.36e-12,22;UBERON:0004161,1.36e-12,22;UBERON:0008836,1.36e-12,22;UBERON:0009854,5.34e-12,23;UBERON:0009856,5.34e-12,23;UBERON:0009569,3.26e-11,66;UBERON:0002365,5.93e-11,25;UBERON:0002330,5.93e-11,25;UBERON:0000945,2.16e-09,16;UBERON:0010039,2.16e-09,16;UBERON:0005177,5.55e-09,79;UBERON:0001041,7.69e-09,80;UBERON:0002075,7.79e-08,19;UBERON:0002100,1.35e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,5.66930748691513,4.89693314689703,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0,0.662524555381181,2.90925151881133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,1.05220927943237,0,0,0,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0,0,0,0,0,0,7.17433954579204,9.04171377520734,11.2431056192427,10.7515864335907,8.92355491083942,7.38414970166117,4.31544206176216,1.29708181420028,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,1.53783792718067,1.03193433981611,2.40752885580625,6.40452753815949,3.69074414846768,4.11800711771741,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.512200817262403,1.70174701947806,1.46729213839588,0.551530525350042,0.888986911206461,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.943131706930381,0.37456602987953,0.256100609619477,0.34461281373368,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,0.726732083161643,0.470546902076653,0.169229215783353,0.365855945745545,0,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0.818462086339379,0.77468420592983,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.927471342481686|short_description=p3@Urod}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22275 | |||
|HGNC= | |||
|MCL_coexpression_id=164 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-42bp_to_uc008uhs.1_5end | |||
|cluster_id=chr4:116666344..116666359,- | |||
|description=CAGE_peak_3_at_Urod_5end | |||
|id=chr4:116666344..116666359,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,5.23e-07,3;CL:0002006,5.23e-07,3;CL:0002024,5.23e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.16e-07!6;UBERON:0004457!1.16e-07!6;UBERON:0000042!1.16e-07!6;UBERON:0004854!1.16e-07!6;UBERON:0009034!1.16e-07!6;UBERON:0002095!1.16e-07!6;UBERON:0004782!1.16e-07!6;UBERON:0003281!1.16e-07!6;UBERON:0009664!1.16e-07!6;UBERON:0002296!1.16e-07!6;UBERON:0005602!1.16e-07!6;UBERON:0001179!1.16e-07!6;UBERON:0006293!1.16e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.03e-25,6;UBERON:0004457,1.03e-25,6;UBERON:0000042,1.03e-25,6;UBERON:0004854,1.03e-25,6;UBERON:0009034,1.03e-25,6;UBERON:0002095,1.03e-25,6;UBERON:0004782,1.03e-25,6;UBERON:0003281,1.03e-25,6;UBERON:0009664,1.03e-25,6;UBERON:0002296,1.03e-25,6;UBERON:0005602,1.03e-25,6;UBERON:0001179,1.03e-25,6;UBERON:0006293,1.03e-25,6;UBERON:0005172,6.64e-16,49;UBERON:0005173,6.64e-16,49;UBERON:0002417,6.64e-16,49;UBERON:0000916,6.64e-16,49;UBERON:0003887,2.77e-15,10;UBERON:0002107,1.36e-12,22;UBERON:0007499,1.36e-12,22;UBERON:0006925,1.36e-12,22;UBERON:0009497,1.36e-12,22;UBERON:0000015,1.36e-12,22;UBERON:0002423,1.36e-12,22;UBERON:0006235,1.36e-12,22;UBERON:0008835,1.36e-12,22;UBERON:0003894,1.36e-12,22;UBERON:0004161,1.36e-12,22;UBERON:0008836,1.36e-12,22;UBERON:0009854,5.34e-12,23;UBERON:0009856,5.34e-12,23;UBERON:0009569,3.26e-11,66;UBERON:0002365,5.93e-11,25;UBERON:0002330,5.93e-11,25;UBERON:0000945,2.16e-09,16;UBERON:0010039,2.16e-09,16;UBERON:0005177,5.55e-09,79;UBERON:0001041,7.69e-09,80;UBERON:0002075,7.79e-08,19;UBERON:0002100,1.35e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,5.66930748691513,4.89693314689703,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0,0.662524555381181,2.90925151881133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,1.05220927943237,0,0,0,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0,0,0,0,0,0,7.17433954579204,9.04171377520734,11.2431056192427,10.7515864335907,8.92355491083942,7.38414970166117,4.31544206176216,1.29708181420028,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,1.53783792718067,1.03193433981611,2.40752885580625,6.40452753815949,3.69074414846768,4.11800711771741,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.512200817262403,1.70174701947806,1.46729213839588,0.551530525350042,0.888986911206461,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.943131706930381,0.37456602987953,0.256100609619477,0.34461281373368,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,0.726732083161643,0.470546902076653,0.169229215783353,0.365855945745545,0,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0.818462086339379,0.77468420592983,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.927471342481686 | |||
|short_description=p3@Urod | |||
}} |
Latest revision as of 05:26, 26 September 2015
Short description: | p3@Urod |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Urod_5end |
Coexpression cluster: | MCL_coexpression_mm9:164 |
Association with transcript: | -42bp_to_uc008uhs.1_5end |
EntrezGene: | Urod |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 5.23e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.23e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.23e-07 | 3 |