FFCP PHASE1:Mm9::chr14:60997132..60997208,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72125 | |EntrezGene=72125 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1137 | |MCL_coexpression_id=1137 | ||
|TSSclassifier=NA | |||
|UniProt=Q8CCJ4 | |UniProt=Q8CCJ4 | ||
|association_with_transcript=9bp_to_ENSMUST00000022561,NM_001164705,NM_028113,uc007ufb.2,uc011zmz.1_5end | |association_with_transcript=9bp_to_ENSMUST00000022561,NM_001164705,NM_028113,uc007ufb.2,uc011zmz.1_5end | ||
|cluster_id=chr14:60997132..60997208,+ | |||
|description=CAGE_peak_1_at_Fam123a_5end | |description=CAGE_peak_1_at_Fam123a_5end | ||
|id=chr14:60997132..60997208,+ | |id=chr14:60997132..60997208,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.86e-16!33;CL:0000047!3.86e-16!33;CL:0000031!3.86e-16!33;CL:0000404!3.86e-16!33;CL:0000117!5.59e-15!23;CL:0000337!5.59e-15!23;CL:0000221!1.05e-13!44;CL:0000133!1.05e-13!44;CL:0002319!1.42e-13!43;CL:0000393!4.16e-11!39;CL:0000211!4.16e-11!39;CL:0000055!3.44e-09!50 | |ontology_enrichment_celltype=CL:0000540!3.86e-16!33;CL:0000047!3.86e-16!33;CL:0000031!3.86e-16!33;CL:0000404!3.86e-16!33;CL:0000117!5.59e-15!23;CL:0000337!5.59e-15!23;CL:0000221!1.05e-13!44;CL:0000133!1.05e-13!44;CL:0002319!1.42e-13!43;CL:0000393!4.16e-11!39;CL:0000211!4.16e-11!39;CL:0000055!3.44e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.94e-18,33;CL:0000047,1.94e-18,33;CL:0000031,1.94e-18,33;CL:0000404,1.94e-18,33;CL:0000117,1.39e-17,23;CL:0000337,1.39e-17,23;CL:0000221,1.11e-14,44;CL:0000133,1.11e-14,44;CL:0002319,1.62e-14,43;CL:0000393,1.96e-13,39;CL:0000211,1.96e-13,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.06e-33!71;UBERON:0003075!6.06e-33!71;UBERON:0007284!6.06e-33!71;UBERON:0001017!8.34e-31!73;UBERON:0005743!8.34e-31!73;UBERON:0004121!1.55e-30!102;UBERON:0000924!1.55e-30!102;UBERON:0006601!1.55e-30!102;UBERON:0000073!1.89e-30!75;UBERON:0001016!1.89e-30!75;UBERON:0000033!5.15e-28!63;UBERON:0003056!6.39e-26!49;UBERON:0001049!2.89e-25!52;UBERON:0005068!2.89e-25!52;UBERON:0006241!2.89e-25!52;UBERON:0007135!2.89e-25!52;UBERON:0000955!2.89e-24!50;UBERON:0006238!2.89e-24!50;UBERON:0002616!1.38e-23!49;UBERON:0003080!1.76e-20!40;UBERON:0002780!5.65e-20!39;UBERON:0001890!5.65e-20!39;UBERON:0006240!5.65e-20!39;UBERON:0002020!1.87e-19!34;UBERON:0002791!1.11e-16!29;UBERON:0003528!1.11e-16!29;UBERON:0001893!1.11e-16!29;UBERON:0007811!2.26e-12!86;UBERON:0000956!6.23e-12!21;UBERON:0001869!6.23e-12!21;UBERON:0000203!6.23e-12!21;UBERON:0000153!1.56e-11!94;UBERON:0002619!2.00e-09!17 | |ontology_enrichment_uberon=UBERON:0002346!6.06e-33!71;UBERON:0003075!6.06e-33!71;UBERON:0007284!6.06e-33!71;UBERON:0001017!8.34e-31!73;UBERON:0005743!8.34e-31!73;UBERON:0004121!1.55e-30!102;UBERON:0000924!1.55e-30!102;UBERON:0006601!1.55e-30!102;UBERON:0000073!1.89e-30!75;UBERON:0001016!1.89e-30!75;UBERON:0000033!5.15e-28!63;UBERON:0003056!6.39e-26!49;UBERON:0001049!2.89e-25!52;UBERON:0005068!2.89e-25!52;UBERON:0006241!2.89e-25!52;UBERON:0007135!2.89e-25!52;UBERON:0000955!2.89e-24!50;UBERON:0006238!2.89e-24!50;UBERON:0002616!1.38e-23!49;UBERON:0003080!1.76e-20!40;UBERON:0002780!5.65e-20!39;UBERON:0001890!5.65e-20!39;UBERON:0006240!5.65e-20!39;UBERON:0002020!1.87e-19!34;UBERON:0002791!1.11e-16!29;UBERON:0003528!1.11e-16!29;UBERON:0001893!1.11e-16!29;UBERON:0007811!2.26e-12!86;UBERON:0000956!6.23e-12!21;UBERON:0001869!6.23e-12!21;UBERON:0000203!6.23e-12!21;UBERON:0000153!1.56e-11!94;UBERON:0002619!2.00e-09!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.61e-38,64;UBERON:0003075,2.61e-38,64;UBERON:0007284,2.61e-38,64;UBERON:0001017,3.88e-36,73;UBERON:0001016,2.35e-34,75;UBERON:0004121,8.63e-34,95;UBERON:0000924,8.63e-34,95;UBERON:0006601,8.63e-34,95;UBERON:0010371,4.25e-32,73;UBERON:0000073,8.69e-32,54;UBERON:0003056,1.15e-30,49;UBERON:0001049,3.46e-30,52;UBERON:0005068,3.46e-30,52;UBERON:0006241,3.46e-30,52;UBERON:0007135,3.46e-30,52;UBERON:0000955,7.95e-27,47;UBERON:0006238,7.95e-27,47;UBERON:0002616,5.01e-26,46;UBERON:0010314,2.06e-25,92;UBERON:0003080,3.69e-24,40;UBERON:0002780,1.49e-23,39;UBERON:0001890,1.49e-23,39;UBERON:0006240,1.49e-23,39;UBERON:0002020,6.22e-23,34;UBERON:0003528,1.29e-19,29;UBERON:0002791,1.29e-19,29;UBERON:0001893,1.29e-19,29;UBERON:0000956,6.08e-14,21;UBERON:0001869,6.08e-14,21;UBERON:0000203,6.08e-14,21;UBERON:0002619,5.97e-11,17;UBERON:0002021,2.78e-07,10;UBERON:0000411,2.78e-07,10;UBERON:0001950,2.78e-07,10;UBERON:0000970,4.21e-07,9;UBERON:0000019,4.21e-07,9;UBERON:0000047,4.21e-07,9;UBERON:0010312,4.21e-07,9;UBERON:0004088,4.21e-07,9;UBERON:0002104,4.21e-07,9;UBERON:0001456,4.21e-07,9;UBERON:0003072,4.21e-07,9;UBERON:0004128,4.21e-07,9;UBERON:0003071,4.21e-07,9;UBERON:0002420,7.18e-07,8;UBERON:0007245,7.18e-07,8;UBERON:0010009,7.18e-07,8;UBERON:0010011,7.18e-07,8;UBERON:0000454,7.18e-07,8 | |||
|phase1_expression=3.20297694209588,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85944283031671,1.5626706890476,5.75876118371178,3.52938892818609,5.46436387966757,5.82612423637384,0,0,0.183546752161682,0,2.61630187656536,1.31811709640683,1.74986909166855,0.279972843250725,0,0,0,0,0,0,0,20.4339625468194,16.9277113367051,22.8179305262225,0,0,0,0,0,2.39680088414724,1.92109152660777,28.3072641602144,28.7562648646501,27.552569937031,10.5690864229407,10.3808214247258,30.6226998037385,31.1497780809268,30.3342199581307,15.4162233399144,10.9811110753261,17.5111447912118,20.1786020227197,27.6292683679277,18.2319679694866,9.49222196604695,10.1297269805702,15.8910177687883,17.0884579574727,15.233769845504,19.7583412574819,0.605809546665472,0.906858721281426,0,0,0.679971333707751,0,0,0,0.983110940922263,0,0,0,2.95771181531029,0,0,0,0,0,0,0.79928715803342,0,1.48442139064825,3.64319186208885,4.26251669636998,2.7673859670727,3.46662073271032,3.05730638552832,0.628332956648377,0,0,0,0.323533699894818,0,0,0,19.9090941967852,23.6674778699204,0,0,0,0,11.833460512981,22.4175295381127,21.9895116197513,11.4724051326902,12.5300574091862,13.714010940931,13.1415423084884,0.509196819251581,0.373220911830279,0,2.73574412652416,12.751803410345,11.9549094305406,18.7264614997563,17.7831685046144,32.2493005977294,37.6654337637458,41.6972674290793,12.1590584247337,2.58681591519411,1.32374256117473,1.05570674498369,1.09597866213787,0.556094498451196,0,0.205782136407943,0.796137067273973,0.702213187313235,0,0,0.621377317606506,1.64168241986767,0.540186184383045,0.473489471170421,0,0.617068451549513,0,0.804820204198858,0.116765342367169,0,0,0,0.146199987425332,0,0,16.1923260394378,25.4174392576833,0,0,2.98603550749328,2.09013004674395,1.41754207454303,1.21010114774006,0.667134131534611,0.951128130562796,0,0.329397909448022,0,0.397912944082302,0,0,0.216138049874694,0,0.948339504765408,3.19895835307241,2.25415471346161,1.22190796707189,2.32742984601151,1.54298803758701,0.632365371242573,0,0,0,0,0,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0,0.324270453550071,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,0.505157755894224,0,0,0,3.22135400009824,1.30371981153621,1.18821560042632,0.469380496577004,0.670025029767263,0.714130922658041,0,0.945810864637146,0.221464689648775,0.318909537314974,0,0.172684981865896,0,0,0,0,0,12.36239542906,7.97039468826982,0,0,4.10160685241134,3.51394869866975,7.10897212518236,0.477937595905104,2.89638276307112,4.24614796183249,2.02405350837447,5.55286130031493,3.95287777946523,17.9939937196212,0,0.890328018336276,0.977321756121456,0.494910368917606,0,1.45668381692989,0.906970670894253,0,0.295301892880773,1.22974059177571,0,0,0.356497378384721,0,0,0,4.76615448055303,7.74262704334634,4.2688365648309,5.35842587578981,3.19212420556092,3.56737635204141,4.27827453565514,3.95804433848979,0.23467170806371,0,0.441056796109924,0,0.161464426695906,0,0.238744688006273,0.164140899745061,0,10.5692422145991,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0,0,1.42351197111511,0.609958401380546,0.972048067396211,0.836353184057875,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0,0,2.25477175473676,1.19613236835183,0.496375471371293,0.583353565032143,0.516639293910924,0.337912250981556,0.234714477291508,0,0,0,0.864090018773596,0,0.202725215290164,0.205421914329655,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,1.31377732815827,0.549454872801795,0,0,15.2482997506608,12.4287813856938,13.1765968091061,13.748254587495,11.6464028361009,12.0863023582352,14.8504950050997,13.5096360967266,12.6879874515577,10.3552062350364,8.92571189223919,8.37952234142165,7.34154504742777,3.40349403895612,6.70762120409543,6.25067928730048,4.88942801163553,3.5025959730612,5.45562656306086,3.53776096469316,3.54871019846336,3.39527414494937,4.58843386602424,4.48176066834085,3.38869266838118,1.42888107384922,3.94006708212509,2.89363830695558,4.12085900803307,3.82717192349433,3.08582327146874,3.37204031702741,4.05341522910446,3.48831399917588,3.67026583619789,4.14611578669215,3.65855945745545,3.41990624869196,3.25929873230068,2.80571135828869,3.44041552560105,3.74317033027141,4.91077251803627,4.18329471202108,2.3148793317737,7.49431733813838,2.33931608445408,1.07435527024149,1.14772999241306,1.54413993383661,0.463735671240843 | |phase1_expression=3.20297694209588,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85944283031671,1.5626706890476,5.75876118371178,3.52938892818609,5.46436387966757,5.82612423637384,0,0,0.183546752161682,0,2.61630187656536,1.31811709640683,1.74986909166855,0.279972843250725,0,0,0,0,0,0,0,20.4339625468194,16.9277113367051,22.8179305262225,0,0,0,0,0,2.39680088414724,1.92109152660777,28.3072641602144,28.7562648646501,27.552569937031,10.5690864229407,10.3808214247258,30.6226998037385,31.1497780809268,30.3342199581307,15.4162233399144,10.9811110753261,17.5111447912118,20.1786020227197,27.6292683679277,18.2319679694866,9.49222196604695,10.1297269805702,15.8910177687883,17.0884579574727,15.233769845504,19.7583412574819,0.605809546665472,0.906858721281426,0,0,0.679971333707751,0,0,0,0.983110940922263,0,0,0,2.95771181531029,0,0,0,0,0,0,0.79928715803342,0,1.48442139064825,3.64319186208885,4.26251669636998,2.7673859670727,3.46662073271032,3.05730638552832,0.628332956648377,0,0,0,0.323533699894818,0,0,0,19.9090941967852,23.6674778699204,0,0,0,0,11.833460512981,22.4175295381127,21.9895116197513,11.4724051326902,12.5300574091862,13.714010940931,13.1415423084884,0.509196819251581,0.373220911830279,0,2.73574412652416,12.751803410345,11.9549094305406,18.7264614997563,17.7831685046144,32.2493005977294,37.6654337637458,41.6972674290793,12.1590584247337,2.58681591519411,1.32374256117473,1.05570674498369,1.09597866213787,0.556094498451196,0,0.205782136407943,0.796137067273973,0.702213187313235,0,0,0.621377317606506,1.64168241986767,0.540186184383045,0.473489471170421,0,0.617068451549513,0,0.804820204198858,0.116765342367169,0,0,0,0.146199987425332,0,0,16.1923260394378,25.4174392576833,0,0,2.98603550749328,2.09013004674395,1.41754207454303,1.21010114774006,0.667134131534611,0.951128130562796,0,0.329397909448022,0,0.397912944082302,0,0,0.216138049874694,0,0.948339504765408,3.19895835307241,2.25415471346161,1.22190796707189,2.32742984601151,1.54298803758701,0.632365371242573,0,0,0,0,0,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0,0.324270453550071,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,0.505157755894224,0,0,0,3.22135400009824,1.30371981153621,1.18821560042632,0.469380496577004,0.670025029767263,0.714130922658041,0,0.945810864637146,0.221464689648775,0.318909537314974,0,0.172684981865896,0,0,0,0,0,12.36239542906,7.97039468826982,0,0,4.10160685241134,3.51394869866975,7.10897212518236,0.477937595905104,2.89638276307112,4.24614796183249,2.02405350837447,5.55286130031493,3.95287777946523,17.9939937196212,0,0.890328018336276,0.977321756121456,0.494910368917606,0,1.45668381692989,0.906970670894253,0,0.295301892880773,1.22974059177571,0,0,0.356497378384721,0,0,0,4.76615448055303,7.74262704334634,4.2688365648309,5.35842587578981,3.19212420556092,3.56737635204141,4.27827453565514,3.95804433848979,0.23467170806371,0,0.441056796109924,0,0.161464426695906,0,0.238744688006273,0.164140899745061,0,10.5692422145991,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0,0,1.42351197111511,0.609958401380546,0.972048067396211,0.836353184057875,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0,0,2.25477175473676,1.19613236835183,0.496375471371293,0.583353565032143,0.516639293910924,0.337912250981556,0.234714477291508,0,0,0,0.864090018773596,0,0.202725215290164,0.205421914329655,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,1.31377732815827,0.549454872801795,0,0,15.2482997506608,12.4287813856938,13.1765968091061,13.748254587495,11.6464028361009,12.0863023582352,14.8504950050997,13.5096360967266,12.6879874515577,10.3552062350364,8.92571189223919,8.37952234142165,7.34154504742777,3.40349403895612,6.70762120409543,6.25067928730048,4.88942801163553,3.5025959730612,5.45562656306086,3.53776096469316,3.54871019846336,3.39527414494937,4.58843386602424,4.48176066834085,3.38869266838118,1.42888107384922,3.94006708212509,2.89363830695558,4.12085900803307,3.82717192349433,3.08582327146874,3.37204031702741,4.05341522910446,3.48831399917588,3.67026583619789,4.14611578669215,3.65855945745545,3.41990624869196,3.25929873230068,2.80571135828869,3.44041552560105,3.74317033027141,4.91077251803627,4.18329471202108,2.3148793317737,7.49431733813838,2.33931608445408,1.07435527024149,1.14772999241306,1.54413993383661,0.463735671240843 | ||
|short_description=p1@Fam123a | |short_description=p1@Fam123a | ||
}} | }} |
Latest revision as of 05:01, 26 September 2015
Short description: | p1@Fam123a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam123a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1137 |
Association with transcript: | 9bp_to_ENSMUST00000022561, NM_001164705, NM_028113, uc007ufb.2, uc011zmz.1_5end |
EntrezGene: | Fam123a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.94e-18 | 33 |
neuronal stem cell | 1.94e-18 | 33 |
neuroblast | 1.94e-18 | 33 |
electrically signaling cell | 1.94e-18 | 33 |
CNS neuron (sensu Vertebrata) | 1.39e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-17 | 23 |
ectodermal cell | 1.11e-14 | 44 |
neurectodermal cell | 1.11e-14 | 44 |
neural cell | 1.62e-14 | 43 |
electrically responsive cell | 1.96e-13 | 39 |
electrically active cell | 1.96e-13 | 39 |