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FFCP PHASE1:Mm9::chr19:8994922..8994936,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:8994922..8994936,+
|DHSsupport=NA
|short_description=p3@B3gat3
|DPIdataset=NA
|description=CAGE_peak_3_at_B3gat3_5end
|association_with_transcript=39bp_to_NM_024256,uc008gnz.1,uc008goa.1,uc008gob.1_5end
|EntrezGene=72727
|EntrezGene=72727
|HGNC=
|HGNC=
|MCL_coexpression_id=313
|TSSclassifier=NA
|UniProt=P58158,Q3USF3
|UniProt=P58158,Q3USF3
|association_with_transcript=39bp_to_NM_024256,uc008gnz.1,uc008goa.1,uc008gob.1_5end
|cluster_id=chr19:8994922..8994936,+
|description=CAGE_peak_3_at_B3gat3_5end
|id=chr19:8994922..8994936,+
|ontology_enrichment_celltype=CL:0000117!6.36e-14!23;CL:0000337!6.36e-14!23;CL:0000221!3.06e-10!44;CL:0000133!3.06e-10!44;CL:0002319!5.17e-10!43;CL:0000055!1.10e-09!50;CL:0000540!2.03e-09!33;CL:0000047!2.03e-09!33;CL:0000031!2.03e-09!33;CL:0000404!2.03e-09!33;CL:0000393!2.03e-08!39;CL:0000211!2.03e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,5.78e-26,23;CL:0000337,5.78e-26,23;CL:0000540,1.71e-17,33;CL:0000047,1.71e-17,33;CL:0000031,1.71e-17,33;CL:0000404,1.71e-17,33;CL:0002319,5.86e-17,43;CL:0000221,2.20e-16,44;CL:0000133,2.20e-16,44;CL:0000393,7.07e-15,39;CL:0000211,7.07e-15,39;CL:0002321,1.47e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.22e-21!75;UBERON:0001016!2.22e-21!75;UBERON:0001017!1.73e-20!73;UBERON:0005743!1.73e-20!73;UBERON:0001049!2.00e-20!52;UBERON:0005068!2.00e-20!52;UBERON:0006241!2.00e-20!52;UBERON:0007135!2.00e-20!52;UBERON:0000955!1.09e-18!50;UBERON:0006238!1.09e-18!50;UBERON:0002616!1.30e-18!49;UBERON:0002020!1.14e-17!34;UBERON:0000033!8.74e-17!63;UBERON:0002346!1.67e-15!71;UBERON:0003075!1.67e-15!71;UBERON:0007284!1.67e-15!71;UBERON:0003080!2.11e-15!40;UBERON:0002780!9.20e-15!39;UBERON:0001890!9.20e-15!39;UBERON:0006240!9.20e-15!39;UBERON:0003056!1.30e-14!49;UBERON:0002791!1.59e-14!29;UBERON:0003528!1.59e-14!29;UBERON:0001893!1.59e-14!29;UBERON:0004121!1.01e-13!102;UBERON:0000924!1.01e-13!102;UBERON:0006601!1.01e-13!102;UBERON:0000956!5.13e-10!21;UBERON:0001869!5.13e-10!21;UBERON:0000203!5.13e-10!21;UBERON:0000025!2.60e-09!114;UBERON:0007811!2.86e-09!86;UBERON:0002619!1.42e-08!17;UBERON:0000153!4.58e-08!94;UBERON:0004111!8.92e-08!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.00e-35,54;UBERON:0001016,8.59e-34,75;UBERON:0001017,2.10e-33,73;UBERON:0001049,3.86e-32,52;UBERON:0005068,3.86e-32,52;UBERON:0006241,3.86e-32,52;UBERON:0007135,3.86e-32,52;UBERON:0002020,3.27e-28,34;UBERON:0002346,3.64e-25,64;UBERON:0003075,3.64e-25,64;UBERON:0007284,3.64e-25,64;UBERON:0004121,9.05e-25,95;UBERON:0000924,9.05e-25,95;UBERON:0006601,9.05e-25,95;UBERON:0002616,1.01e-24,46;UBERON:0000955,5.67e-24,47;UBERON:0006238,5.67e-24,47;UBERON:0003528,7.15e-22,29;UBERON:0002791,7.15e-22,29;UBERON:0001893,7.15e-22,29;UBERON:0003080,7.59e-22,40;UBERON:0010371,7.86e-22,73;UBERON:0002780,1.26e-20,39;UBERON:0001890,1.26e-20,39;UBERON:0006240,1.26e-20,39;UBERON:0010314,1.52e-17,92;UBERON:0003056,2.09e-17,49;UBERON:0000956,2.37e-14,21;UBERON:0001869,2.37e-14,21;UBERON:0000203,2.37e-14,21;UBERON:0002619,1.10e-12,17;UBERON:0000025,1.45e-12,114;UBERON:0004111,1.08e-11,122;UBERON:0003076,9.98e-11,12;UBERON:0003057,9.98e-11,12;UBERON:0002240,5.90e-09,6;UBERON:0005174,5.90e-09,6;UBERON:0001137,5.90e-09,6;UBERON:0002420,8.07e-09,8;UBERON:0007245,8.07e-09,8;UBERON:0010009,8.07e-09,8;UBERON:0010011,8.07e-09,8;UBERON:0000454,8.07e-09,8;UBERON:0002021,4.98e-08,10;UBERON:0000411,4.98e-08,10;UBERON:0001950,4.98e-08,10;UBERON:0001948,9.43e-08,5;UBERON:0002315,9.43e-08,5;UBERON:0002950,3.44e-07,4;UBERON:0001891,3.44e-07,4;UBERON:0009616,3.44e-07,4;UBERON:0010286,3.44e-07,4;UBERON:0011216,4.05e-07,194
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|phase1_expression=1.44133962394315,0.697950815278722,0.454999239389536,0,0.500895729946347,0,0,0.516493293766305,0.281577444303333,0,0,0.478632953972018,0,0.437102012094987,0.333109761815663,0.404950534779652,0,0.473193248037357,0.411343300817216,0,1.36069264241712,0.595745707205312,0.522399578277871,0.319984845586813,0.45881856213434,1.14846392823004,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0.418531630736908,1.5626706890476,0.523523743973798,0.588231488031014,2.73218193983378,1.94204141212461,0.251793635951155,0.304130793658544,0.734187008646726,0,0.65407546914134,0.878744730937887,1.36100929351998,0.55994568650145,0,1.00669563634642,0,1.34437519656986,1.02903774414379,0.286533439938757,0.515672092277442,2.63011399117477,1.05798195854407,2.53532561402472,0.677689064138264,0,0.449949858640699,0,0.7104801149461,1.19840044207362,1.92109152660777,1.45165457231869,1.08004750665353,0.841299845405528,3.71346279724945,2.65042249141936,1.95985278743926,2.39613677545591,1.83843757322004,2.20231761998777,8.04430229936683,9.98442466165583,2.63772575460388,3.01909223887952,1.56274011167028,8.93385596804419,6.75315132038016,5.65353516774197,2.94628585473668,1.70846016958924,4.84638559145781,1.59025005999687,0.982430281388212,0,2.58127163094416,0,1.07940638327563,0.649776417447669,0,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,0.845060518660083,1.28326477414318,0,0,0.432982082022428,0.506719730950197,0,0.45673551887624,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,1.13099932196708,0.741584903203122,0.289198713839823,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,0,2.34224637609238,1.46612694769419,0,0,0.599902730993408,0.254140454146129,3.14560342750128,0.915001205637253,2.01046963380583,2.08589184230732,1.79000820131231,3.74018480207208,1.62241263067758,0.611036183101898,0.622034853050465,0.252722758433675,0.210441855886474,0.390361328888111,0.919608417733892,1.0803727788321,0.60281927134286,0.544291993210623,0.384341160854549,0.749613796477831,0.517406741478031,0.862271971731369,0.567318240503458,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0.257347907114715,0.852490498186778,0,0.938104239924385,0.540186184383045,0,0.590292695242212,0.308534225774757,0,0,0.116765342367169,0.329119699826961,0.164167464079095,0.486412857275134,1.02339991197733,0.439100230582101,0.536825675041487,2.52347938276953,1.02904612379284,0,0.264450566663544,0.853153002140936,0.464473343720877,0.38660238396628,0.403367049246685,0,0.380451252225118,0,0.329397909448022,0.502670417600539,0,0.38992817423824,0,0.216138049874694,0.199141273254367,0.379335801906163,0.456994050438915,0,0.814605311381257,0.387904974335251,0.420814919341911,0.189709611372772,0.147610147979602,0.941992367048249,0.493588655687202,0,0.333690211432188,0.982794975566015,0.449724224769707,1.01430060694251,0.72353147925725,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,1.11642284300551,0.624075346229121,0.757736633841335,0.358794827043824,0.482443521363367,0.184753190166605,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0.502518772325447,0.714130922658041,0.585400943573396,0.472905432318573,0.221464689648775,0.318909537314974,0.163863314715738,0.690739927463582,0.723245292907558,0,0,0,0.275936746304732,3.05046120976805,2.57865710502847,0.327869890753351,1.51482556322624,0.631016438832513,0.390438744296638,0,0.716906393857656,0.891194696329576,0.283076530788832,0,0.292255857911312,0,0.642642632843614,0.567760340833074,0.534196811001766,0.325773918707152,0.659880491890142,0,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0,0.258428293168221,1.45413491791002,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.36012218806262,1.03486947026204,0.643011105094777,0.177340233642274,0.891844088010353,0.658196082408484,1.8267896946876,0.469343416127421,0.63549621259146,0,0.32977250588296,0,0,0.119372344003136,0.164140899745061,0.291480836629851,2.59595422814714,0.512612642393558,0.619160603889667,0.555583582109135,0.376736914009382,0,0.228778173206523,0.849892149969277,0.419854356970974,0,0.954670618015114,0.790839983952838,0.406638934253697,0.324016022465404,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,0,0.56369293868419,0.448549638131936,0.992750942742586,1.36115831840833,0.387479470433193,1.18269287843545,0.469428954583016,0.5208175393758,0.838874755405687,0.483168241652012,0.864090018773596,0.316011120628178,0.405450430580328,0.205421914329655,0.51968329191118,0.358053391334963,0.198681354781265,0.360586348559907,0.590758108698309,0.201932899896295,0.381034033274999,0.403304740547362,0.194915761479505,0.192423683280659,0.467507608726276,0,0.443971906748129,0.62799699626633,0,0.19318959403219,0.563047426353546,0.183151624267265,0.428736758158132,0,1.12950368523413,2.30162618253588,0.572895513439397,3.95262319390481,0.685082519770642,3.7769694869485,4.05013500139084,2.2516060161211,2.26571204492102,1.55328093525546,0.62272408550506,0.798049746802062,0.341467211508268,0.486213434136588,0,0.183843508450014,0.666740183404846,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.704276676453562,0.746661096422973,0.952587382566147,0.927074607558844,0.964546102318525,0.824171801606613,0.588795680537589,0,0.532427418478012,1.43061713968393,0.436039249896986,0.282328141245992,0.338458431566706,0.365855945745545,0,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,1.22769312950907,0.77468420592983,0.385813221962283,0.499621155875892,0.701794825336225,1.07435527024149,0.57386499620653,0.220591419119515,0.231867835620421
|short_description=p3@B3gat3
}}
}}

Latest revision as of 04:51, 26 September 2015

Short description:p3@B3gat3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_B3gat3_5end
Coexpression cluster:MCL_coexpression_mm9:313
Association with transcript: 39bp_to_NM_024256, uc008gnz.1, uc008goa.1, uc008gob.1_5end
EntrezGene:B3gat3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@B3gat3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.78e-2623
neuroblast (sensu Vertebrata)5.78e-2623
neuron1.71e-1733
neuronal stem cell1.71e-1733
neuroblast1.71e-1733
electrically signaling cell1.71e-1733
neural cell5.86e-1743
ectodermal cell2.20e-1644
neurectodermal cell2.20e-1644
electrically responsive cell7.07e-1539
electrically active cell7.07e-1539
embryonic cell1.47e-0970

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.00e-3554
nervous system8.59e-3475
central nervous system2.10e-3373
neural tube3.86e-3252
neural rod3.86e-3252
future spinal cord3.86e-3252
neural keel3.86e-3252
gray matter3.27e-2834
neurectoderm3.64e-2564
neural plate3.64e-2564
presumptive neural plate3.64e-2564
ectoderm-derived structure9.05e-2595
ectoderm9.05e-2595
presumptive ectoderm9.05e-2595
regional part of brain1.01e-2446
brain5.67e-2447
future brain5.67e-2447
brain grey matter7.15e-2229
regional part of telencephalon7.15e-2229
telencephalon7.15e-2229
anterior neural tube7.59e-2240
ecto-epithelium7.86e-2273
regional part of forebrain1.26e-2039
forebrain1.26e-2039
future forebrain1.26e-2039
structure with developmental contribution from neural crest1.52e-1792
pre-chordal neural plate2.09e-1749
cerebral cortex2.37e-1421
cerebral hemisphere2.37e-1421
pallium2.37e-1421
regional part of cerebral cortex1.10e-1217
tube1.45e-12114
anatomical conduit1.08e-11122
posterior neural tube9.98e-1112
chordal neural plate9.98e-1112
spinal cord5.90e-096
dorsal region element5.90e-096
dorsum5.90e-096
basal ganglion8.07e-098
nuclear complex of neuraxis8.07e-098
aggregate regional part of brain8.07e-098
collection of basal ganglia8.07e-098
cerebral subcortex8.07e-098
occipital lobe4.98e-0810
visual cortex4.98e-0810
neocortex4.98e-0810
regional part of spinal cord9.43e-085
gray matter of spinal cord9.43e-085
regional part of midbrain3.44e-074
midbrain3.44e-074
presumptive midbrain3.44e-074
midbrain neural tube3.44e-074
organ system subdivision4.05e-07194
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