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FFCP PHASE1:Mm9::chr5:67359771..67359785,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=77569
|EntrezGene=77569
|HGNC=
|HGNC=
|MCL_coexpression_id=1027
|MCL_coexpression_id=1027
|TSSclassifier=NA
|UniProt=Q8CGB7
|UniProt=Q8CGB7
|association_with_transcript=-19bp_to_ENSMUST00000140428,uc008xpk.1_5end
|association_with_transcript=-19bp_to_ENSMUST00000140428,uc008xpk.1_5end
|cluster_id=chr5:67359771..67359785,+
|description=CAGE_peak_9_at_Limch1_5end
|description=CAGE_peak_9_at_Limch1_5end
|id=chr5:67359771..67359785,+
|id=chr5:67359771..67359785,+
|ontology_enrichment_celltype=CL:0000540!2.20e-08!33;CL:0000047!2.20e-08!33;CL:0000031!2.20e-08!33;CL:0000404!2.20e-08!33;CL:0000221!1.62e-07!44;CL:0000133!1.62e-07!44;CL:0002319!5.66e-07!43
|ontology_enrichment_celltype=CL:0000540!2.20e-08!33;CL:0000047!2.20e-08!33;CL:0000031!2.20e-08!33;CL:0000404!2.20e-08!33;CL:0000221!1.62e-07!44;CL:0000133!1.62e-07!44;CL:0002319!5.66e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000107,3.13e-11,9;CL:0000540,5.20e-07,33;CL:0000047,5.20e-07,33;CL:0000031,5.20e-07,33;CL:0000404,5.20e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.06e-17!102;UBERON:0000924!4.06e-17!102;UBERON:0006601!4.06e-17!102;UBERON:0000073!4.25e-15!75;UBERON:0001016!4.25e-15!75;UBERON:0000033!1.84e-14!63;UBERON:0001017!4.25e-14!73;UBERON:0005743!4.25e-14!73;UBERON:0002346!2.39e-13!71;UBERON:0003075!2.39e-13!71;UBERON:0007284!2.39e-13!71;UBERON:0003056!2.32e-11!49;UBERON:0001049!2.08e-10!52;UBERON:0005068!2.08e-10!52;UBERON:0006241!2.08e-10!52;UBERON:0007135!2.08e-10!52;UBERON:0000955!3.11e-10!50;UBERON:0006238!3.11e-10!50;UBERON:0002616!1.28e-09!49;UBERON:0002020!2.75e-09!34;UBERON:0002791!8.54e-09!29;UBERON:0003528!8.54e-09!29;UBERON:0001893!8.54e-09!29;UBERON:0003080!8.67e-08!40;UBERON:0007811!1.26e-07!86;UBERON:0000153!2.34e-07!94;UBERON:0002780!2.82e-07!39;UBERON:0001890!2.82e-07!39;UBERON:0006240!2.82e-07!39;UBERON:0000956!5.44e-07!21;UBERON:0001869!5.44e-07!21;UBERON:0000203!5.44e-07!21
|ontology_enrichment_uberon=UBERON:0004121!4.06e-17!102;UBERON:0000924!4.06e-17!102;UBERON:0006601!4.06e-17!102;UBERON:0000073!4.25e-15!75;UBERON:0001016!4.25e-15!75;UBERON:0000033!1.84e-14!63;UBERON:0001017!4.25e-14!73;UBERON:0005743!4.25e-14!73;UBERON:0002346!2.39e-13!71;UBERON:0003075!2.39e-13!71;UBERON:0007284!2.39e-13!71;UBERON:0003056!2.32e-11!49;UBERON:0001049!2.08e-10!52;UBERON:0005068!2.08e-10!52;UBERON:0006241!2.08e-10!52;UBERON:0007135!2.08e-10!52;UBERON:0000955!3.11e-10!50;UBERON:0006238!3.11e-10!50;UBERON:0002616!1.28e-09!49;UBERON:0002020!2.75e-09!34;UBERON:0002791!8.54e-09!29;UBERON:0003528!8.54e-09!29;UBERON:0001893!8.54e-09!29;UBERON:0003080!8.67e-08!40;UBERON:0007811!1.26e-07!86;UBERON:0000153!2.34e-07!94;UBERON:0002780!2.82e-07!39;UBERON:0001890!2.82e-07!39;UBERON:0006240!2.82e-07!39;UBERON:0000956!5.44e-07!21;UBERON:0001869!5.44e-07!21;UBERON:0000203!5.44e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.65e-26,95;UBERON:0000924,1.65e-26,95;UBERON:0006601,1.65e-26,95;UBERON:0002346,5.67e-23,64;UBERON:0003075,5.67e-23,64;UBERON:0007284,5.67e-23,64;UBERON:0010371,4.98e-21,73;UBERON:0001016,2.19e-20,75;UBERON:0001017,1.88e-19,73;UBERON:0003056,1.10e-15,49;UBERON:0010314,3.86e-15,92;UBERON:0000955,3.14e-13,47;UBERON:0006238,3.14e-13,47;UBERON:0001049,1.07e-12,52;UBERON:0005068,1.07e-12,52;UBERON:0006241,1.07e-12,52;UBERON:0007135,1.07e-12,52;UBERON:0000073,6.04e-12,54;UBERON:0002616,6.49e-12,46;UBERON:0000010,1.00e-11,11;UBERON:0002410,3.13e-11,9;UBERON:0000970,1.18e-10,9;UBERON:0000019,1.18e-10,9;UBERON:0000047,1.18e-10,9;UBERON:0010312,1.18e-10,9;UBERON:0004088,1.18e-10,9;UBERON:0002104,1.18e-10,9;UBERON:0001456,1.18e-10,9;UBERON:0003072,1.18e-10,9;UBERON:0004128,1.18e-10,9;UBERON:0003071,1.18e-10,9;UBERON:0000020,2.73e-10,12;UBERON:0001032,2.73e-10,12;UBERON:0004456,2.73e-10,12;UBERON:0000033,2.18e-09,13;UBERON:0005085,2.18e-09,13;UBERON:0002021,2.50e-09,10;UBERON:0000411,2.50e-09,10;UBERON:0001950,2.50e-09,10;UBERON:0001444,1.62e-08,11;UBERON:0003080,1.65e-08,40;UBERON:0003528,4.19e-08,29;UBERON:0002791,4.19e-08,29;UBERON:0001893,4.19e-08,29;UBERON:0000956,4.39e-08,21;UBERON:0001869,4.39e-08,21;UBERON:0000203,4.39e-08,21;UBERON:0002020,1.12e-07,34;UBERON:0002780,1.64e-07,39;UBERON:0001890,1.64e-07,39;UBERON:0006240,1.64e-07,39;UBERON:0000013,1.75e-07,3
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,0.270011876663381,1.89292465216244,0.856952953211411,0.441737081903227,0.489963196859816,0.383381884072945,0,0,1.53224805702225,0.921639199537461,0.527545150920775,0.731901148819277,0,0.558365998002762,2.8138130501584,1.98637722109853,0,0.284743361598206,1.1183966749518,1.81742863999642,0.604572480854284,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,2.67602497575693,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0,0,0,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.970601099684455,1.54589062922275,0.969750506270444,0,1.17112318804619,2.51336048176146,0,0,0,0,1.64769703345305,0.457500602818626,0.251308704225729,1.56441888173049,0.511430914660661,1.45451631191692,1.29793010454206,0.407357455401265,0.497627882440372,0,1.26265113531884,1.04096354370163,0,0.720248519221397,2.10986744970001,1.90502197623718,1.7935920839879,1.59292931751539,1.55222022443409,0,0,0,0.43839146485515,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,1.47202963994889,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0.397912944082302,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651859905768103,0,0.938760993154008,0.502518772325447,0.238043640886014,0.585400943573396,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.690739927463582,0.433947175744535,0,0,0,0,1.12385412991454,1.17211686592203,0,1.00988370881749,0,2.34263246577983,2.15423397732799,1.19484398976276,1.33679204449436,0.849229592366497,2.83367491172426,1.75353514746787,1.58115111178609,4.4984984299053,0.141940085208269,0.178065603667255,0.325773918707152,0,1.32745138339963,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0,0,0.329098041204242,0,0,0,0.220528398054962,0.32977250588296,0.322928853391811,0.180938774784468,0.477489376012546,0.328281799490123,0,2.03967832211561,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0,0.108005340821801,0.418176592028937,0,0.269728692769641,0,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0,0,0,0.2604087696879,0,0.483168241652012,0.288030006257865,0,0.405450430580328,0.821687657318618,0.389762468933385,0,0.198681354781265,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0.501572104035363,2.25900737046827,1.38097570952153,0.572895513439397,1.03111909406213,2.05524755931193,2.2661816921691,0,0.45032120322422,1.35942722695261,1.03552062350364,0.93408612825759,0.798049746802062,0.512200817262403,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.512201219238954,0.976402972245426,0,0.463537303779422,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,1.43061713968393,0.581385666529314,0.470546902076653,0.761531471025089,0.548783918618318,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0.409231043169689,0.619747364743864,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,1.14772999241306,0.882365676478062,0.463735671240843
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,0.270011876663381,1.89292465216244,0.856952953211411,0.441737081903227,0.489963196859816,0.383381884072945,0,0,1.53224805702225,0.921639199537461,0.527545150920775,0.731901148819277,0,0.558365998002762,2.8138130501584,1.98637722109853,0,0.284743361598206,1.1183966749518,1.81742863999642,0.604572480854284,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,2.67602497575693,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0,0,0,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.970601099684455,1.54589062922275,0.969750506270444,0,1.17112318804619,2.51336048176146,0,0,0,0,1.64769703345305,0.457500602818626,0.251308704225729,1.56441888173049,0.511430914660661,1.45451631191692,1.29793010454206,0.407357455401265,0.497627882440372,0,1.26265113531884,1.04096354370163,0,0.720248519221397,2.10986744970001,1.90502197623718,1.7935920839879,1.59292931751539,1.55222022443409,0,0,0,0.43839146485515,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,1.47202963994889,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0.397912944082302,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651859905768103,0,0.938760993154008,0.502518772325447,0.238043640886014,0.585400943573396,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.690739927463582,0.433947175744535,0,0,0,0,1.12385412991454,1.17211686592203,0,1.00988370881749,0,2.34263246577983,2.15423397732799,1.19484398976276,1.33679204449436,0.849229592366497,2.83367491172426,1.75353514746787,1.58115111178609,4.4984984299053,0.141940085208269,0.178065603667255,0.325773918707152,0,1.32745138339963,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0,0,0.329098041204242,0,0,0,0.220528398054962,0.32977250588296,0.322928853391811,0.180938774784468,0.477489376012546,0.328281799490123,0,2.03967832211561,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0,0.108005340821801,0.418176592028937,0,0.269728692769641,0,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0,0,0,0.2604087696879,0,0.483168241652012,0.288030006257865,0,0.405450430580328,0.821687657318618,0.389762468933385,0,0.198681354781265,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0.501572104035363,2.25900737046827,1.38097570952153,0.572895513439397,1.03111909406213,2.05524755931193,2.2661816921691,0,0.45032120322422,1.35942722695261,1.03552062350364,0.93408612825759,0.798049746802062,0.512200817262403,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.512201219238954,0.976402972245426,0,0.463537303779422,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,1.43061713968393,0.581385666529314,0.470546902076653,0.761531471025089,0.548783918618318,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0.409231043169689,0.619747364743864,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,1.14772999241306,0.882365676478062,0.463735671240843
|short_description=p9@Limch1
|short_description=p9@Limch1
}}
}}

Latest revision as of 04:17, 26 September 2015

Short description:p9@Limch1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Limch1_5end
Coexpression cluster:MCL_coexpression_mm9:1027
Association with transcript: -19bp_to_ENSMUST00000140428, uc008xpk.1_5end
EntrezGene:Limch1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Limch1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron3.13e-119
neuron5.20e-0733
neuronal stem cell5.20e-0733
neuroblast5.20e-0733
electrically signaling cell5.20e-0733

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.65e-2695
ectoderm1.65e-2695
presumptive ectoderm1.65e-2695
neurectoderm5.67e-2364
neural plate5.67e-2364
presumptive neural plate5.67e-2364
ecto-epithelium4.98e-2173
nervous system2.19e-2075
central nervous system1.88e-1973
pre-chordal neural plate1.10e-1549
structure with developmental contribution from neural crest3.86e-1592
brain3.14e-1347
future brain3.14e-1347
neural tube1.07e-1252
neural rod1.07e-1252
future spinal cord1.07e-1252
neural keel1.07e-1252
regional part of nervous system6.04e-1254
regional part of brain6.49e-1246
peripheral nervous system1.00e-1111
autonomic nervous system3.13e-119
eye1.18e-109
camera-type eye1.18e-109
simple eye1.18e-109
immature eye1.18e-109
ocular region1.18e-109
visual system1.18e-109
face1.18e-109
optic cup1.18e-109
optic vesicle1.18e-109
eye primordium1.18e-109
sense organ2.73e-1012
sensory system2.73e-1012
entire sense organ system2.73e-1012
head2.18e-0913
ectodermal placode2.18e-0913
occipital lobe2.50e-0910
visual cortex2.50e-0910
neocortex2.50e-0910
subdivision of head1.62e-0811
anterior neural tube1.65e-0840
brain grey matter4.19e-0829
regional part of telencephalon4.19e-0829
telencephalon4.19e-0829
cerebral cortex4.39e-0821
cerebral hemisphere4.39e-0821
pallium4.39e-0821
gray matter1.12e-0734
regional part of forebrain1.64e-0739
forebrain1.64e-0739
future forebrain1.64e-0739
sympathetic nervous system1.75e-073
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