FFCP PHASE1:Mm9::chr2:165213745..165213815,-: Difference between revisions
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{{FFCP|EntrezGene=228876|HGNC=|MCL_coexpression_id=321|UniProt=A2A4U6|association_with_transcript=0bp_to_ENSMUST00000103084,NM_178411,uc008nxq.1_5end|description=CAGE_peak_1_at_Zfp334_5end|id=chr2:165213745..165213815,-|ontology_enrichment_celltype=CL:0000540!2.13e-14!33;CL:0000047!2.13e-14!33;CL:0000031!2.13e-14!33;CL:0000404!2.13e-14!33;CL:0000393!1.01e-13!39;CL:0000211!1.01e-13!39;CL:0000117!2.72e-11!23;CL:0000337!2.72e-11!23;CL:0002319!6.42e-11!43;CL:0000221!8.27e-11!44;CL:0000133!8.27e-11!44;CL:0000055!2.07e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.83e-14,33;CL:0000047,1.83e-14,33;CL:0000031,1.83e-14,33;CL:0000404,1.83e-14,33;CL:0000393,8.72e-14,39;CL:0000211,8.72e-14,39;CL:0000117,2.42e-11,23;CL:0000337,2.42e-11,23;CL:0002319,5.75e-11,43;CL:0000221,7.41e-11,44;CL:0000133,7.41e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.07e-21!73;UBERON:0005743!1.07e-21!73;UBERON:0000073!1.78e-21!75;UBERON:0001016!1.78e-21!75;UBERON:0004121!3.59e-20!102;UBERON:0000924!3.59e-20!102;UBERON:0006601!3.59e-20!102;UBERON:0002346!5.96e-20!71;UBERON:0003075!5.96e-20!71;UBERON:0007284!5.96e-20!71;UBERON:0000033!8.28e-18!63;UBERON:0003056!5.77e-17!49;UBERON:0001049!4.04e-16!52;UBERON:0005068!4.04e-16!52;UBERON:0006241!4.04e-16!52;UBERON:0007135!4.04e-16!52;UBERON:0000955!4.17e-16!50;UBERON:0006238!4.17e-16!50;UBERON:0002616!1.46e-15!49;UBERON:0003080!6.18e-14!40;UBERON:0002780!1.74e-13!39;UBERON:0001890!1.74e-13!39;UBERON:0006240!1.74e-13!39;UBERON:0000468!2.52e-11!333;UBERON:0000025!4.15e-11!114;UBERON:0002020!1.26e-10!34;UBERON:0000922!3.10e-10!328;UBERON:0004111!1.56e-09!122;UBERON:0002791!2.09e-09!29;UBERON:0003528!2.09e-09!29;UBERON:0001893!2.09e-09!29;UBERON:0000153!5.02e-09!94;UBERON:0007811!1.96e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.44e-22,73;UBERON:0001016,1.41e-21,75;UBERON:0002346,1.55e-20,64;UBERON:0003075,1.55e-20,64;UBERON:0007284,1.55e-20,64;UBERON:0004121,4.33e-20,95;UBERON:0000924,4.33e-20,95;UBERON:0006601,4.33e-20,95;UBERON:0010314,1.34e-17,92;UBERON:0010371,4.23e-17,73;UBERON:0003056,4.81e-17,49;UBERON:0000073,5.20e-17,54;UBERON:0001049,3.40e-16,52;UBERON:0005068,3.40e-16,52;UBERON:0006241,3.40e-16,52;UBERON:0007135,3.40e-16,52;UBERON:0000955,3.69e-15,47;UBERON:0006238,3.69e-15,47;UBERON:0002616,1.28e-14,46;UBERON:0003080,5.34e-14,40;UBERON:0002780,1.51e-13,39;UBERON:0001890,1.51e-13,39;UBERON:0006240,1.51e-13,39;UBERON:0000025,4.45e-11,114;UBERON:0002020,1.13e-10,34;UBERON:0000922,2.97e-10,320;UBERON:0003528,1.90e-09,29;UBERON:0002791,1.90e-09,29;UBERON:0001893,1.90e-09,29;UBERON:0004111,1.99e-09,122|phase1_expression=11.2104192973356,0,0,0,0,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20816018102809,0.198581902401771,0,0,0,0,0,0,0,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,11.4566104357775,10.44182391561,13.5824596599644,3.9119567217402,6.5407546914134,5.05278220289285,5.8328969722285,8.25919887589639,8.62515386189829,0,0,0,6.43148590089868,8.88253663810146,4.64104883049698,17.601532094785,17.9856932952491,15.2119536841483,4.40497891689872,7.11435836888911,0.899899717281399,0.988866362566974,0,2.99600110518405,3.84218305321555,24.1596796678753,19.8458729347585,19.9808713283813,8.2838785477103,12.8103753751936,19.7210186736076,30.9580871388903,23.8996884518605,12.1127469099328,14.1732945274558,17.2039317246993,20.3104883104499,25.9824907830843,26.045668527838,15.0758819460746,14.069065250792,16.1966142643419,17.6777151284201,12.5287079103211,16.0303523409758,6.89108359331975,9.59758813356176,7.24661221754194,4.30211938490693,2.719885334831,0.539703191637817,1.94932925234301,1.34408066129201,2.66844398250329,6.64678258054425,4.41636207824877,7.42013106471715,8.02807492727079,20.5322363862909,2.54805239706646,28.4426681261332,2.16491041011214,1.77351905832569,1.51657333504435,1.94112595522402,1.03575153458869,5.49235914539852,14.2257967948231,8.22056791442781,8.99400439298628,8.44046787094686,10.1126288136706,5.52933001850572,4.20231445148436,3.7595832799177,2.65383165584962,7.92657564742305,4.85851340612866,5.33362778448744,0,16.3957246326466,17.1746299587033,0.510914110417183,0,0,0,16.3271796951257,17.3850229071078,25.8847965352501,13.0368240144207,12.5300574091862,12.259494629014,13.7905073607594,14.4611896667449,5.22509276562391,2.77995034277042,5.47148825304832,21.9903548606969,14.4838325793088,16.3856538122868,16.2761203262572,18.0296722751019,16.9110110776002,18.1781345645874,8.79591460512653,23.0657752438141,22.8818357003061,19.3546236580344,13.1517439456545,12.7901734643775,11.1440693287093,10.2891068203972,18.3111525473014,0,0,0,12.8417978972011,14.540615718828,11.884096056427,11.8372367792605,8.26409773339096,11.1072321278912,8.13868806626427,7.77992864058896,6.30532848782715,5.10135534731789,4.76085645829376,5.43161023957233,3.65499968563331,4.17145219052996,5.09984391289413,13.6688466566683,20.5809224758569,0,1.05780226665418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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=228876 | |||
|HGNC= | |||
|MCL_coexpression_id=321 | |||
|TSSclassifier=NA | |||
|UniProt=A2A4U6 | |||
|association_with_transcript=0bp_to_ENSMUST00000103084,NM_178411,uc008nxq.1_5end | |||
|cluster_id=chr2:165213745..165213815,- | |||
|description=CAGE_peak_1_at_Zfp334_5end | |||
|id=chr2:165213745..165213815,- | |||
|ontology_enrichment_celltype=CL:0000540!2.13e-14!33;CL:0000047!2.13e-14!33;CL:0000031!2.13e-14!33;CL:0000404!2.13e-14!33;CL:0000393!1.01e-13!39;CL:0000211!1.01e-13!39;CL:0000117!2.72e-11!23;CL:0000337!2.72e-11!23;CL:0002319!6.42e-11!43;CL:0000221!8.27e-11!44;CL:0000133!8.27e-11!44;CL:0000055!2.07e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.83e-14,33;CL:0000047,1.83e-14,33;CL:0000031,1.83e-14,33;CL:0000404,1.83e-14,33;CL:0000393,8.72e-14,39;CL:0000211,8.72e-14,39;CL:0000117,2.42e-11,23;CL:0000337,2.42e-11,23;CL:0002319,5.75e-11,43;CL:0000221,7.41e-11,44;CL:0000133,7.41e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.07e-21!73;UBERON:0005743!1.07e-21!73;UBERON:0000073!1.78e-21!75;UBERON:0001016!1.78e-21!75;UBERON:0004121!3.59e-20!102;UBERON:0000924!3.59e-20!102;UBERON:0006601!3.59e-20!102;UBERON:0002346!5.96e-20!71;UBERON:0003075!5.96e-20!71;UBERON:0007284!5.96e-20!71;UBERON:0000033!8.28e-18!63;UBERON:0003056!5.77e-17!49;UBERON:0001049!4.04e-16!52;UBERON:0005068!4.04e-16!52;UBERON:0006241!4.04e-16!52;UBERON:0007135!4.04e-16!52;UBERON:0000955!4.17e-16!50;UBERON:0006238!4.17e-16!50;UBERON:0002616!1.46e-15!49;UBERON:0003080!6.18e-14!40;UBERON:0002780!1.74e-13!39;UBERON:0001890!1.74e-13!39;UBERON:0006240!1.74e-13!39;UBERON:0000468!2.52e-11!333;UBERON:0000025!4.15e-11!114;UBERON:0002020!1.26e-10!34;UBERON:0000922!3.10e-10!328;UBERON:0004111!1.56e-09!122;UBERON:0002791!2.09e-09!29;UBERON:0003528!2.09e-09!29;UBERON:0001893!2.09e-09!29;UBERON:0000153!5.02e-09!94;UBERON:0007811!1.96e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.44e-22,73;UBERON:0001016,1.41e-21,75;UBERON:0002346,1.55e-20,64;UBERON:0003075,1.55e-20,64;UBERON:0007284,1.55e-20,64;UBERON:0004121,4.33e-20,95;UBERON:0000924,4.33e-20,95;UBERON:0006601,4.33e-20,95;UBERON:0010314,1.34e-17,92;UBERON:0010371,4.23e-17,73;UBERON:0003056,4.81e-17,49;UBERON:0000073,5.20e-17,54;UBERON:0001049,3.40e-16,52;UBERON:0005068,3.40e-16,52;UBERON:0006241,3.40e-16,52;UBERON:0007135,3.40e-16,52;UBERON:0000955,3.69e-15,47;UBERON:0006238,3.69e-15,47;UBERON:0002616,1.28e-14,46;UBERON:0003080,5.34e-14,40;UBERON:0002780,1.51e-13,39;UBERON:0001890,1.51e-13,39;UBERON:0006240,1.51e-13,39;UBERON:0000025,4.45e-11,114;UBERON:0002020,1.13e-10,34;UBERON:0000922,2.97e-10,320;UBERON:0003528,1.90e-09,29;UBERON:0002791,1.90e-09,29;UBERON:0001893,1.90e-09,29;UBERON:0004111,1.99e-09,122 | |||
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| |||
|short_description=p1@Zfp334 | |||
}} |
Latest revision as of 04:08, 26 September 2015
Short description: | p1@Zfp334 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp334_5end |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | 0bp_to_ENSMUST00000103084, NM_178411, uc008nxq.1_5end |
EntrezGene: | Zfp334 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.83e-14 | 33 |
neuronal stem cell | 1.83e-14 | 33 |
neuroblast | 1.83e-14 | 33 |
electrically signaling cell | 1.83e-14 | 33 |
electrically responsive cell | 8.72e-14 | 39 |
electrically active cell | 8.72e-14 | 39 |
CNS neuron (sensu Vertebrata) | 2.42e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.42e-11 | 23 |
neural cell | 5.75e-11 | 43 |
ectodermal cell | 7.41e-11 | 44 |
neurectodermal cell | 7.41e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.44e-22 | 73 |
nervous system | 1.41e-21 | 75 |
neurectoderm | 1.55e-20 | 64 |
neural plate | 1.55e-20 | 64 |
presumptive neural plate | 1.55e-20 | 64 |
ectoderm-derived structure | 4.33e-20 | 95 |
ectoderm | 4.33e-20 | 95 |
presumptive ectoderm | 4.33e-20 | 95 |
structure with developmental contribution from neural crest | 1.34e-17 | 92 |
ecto-epithelium | 4.23e-17 | 73 |
pre-chordal neural plate | 4.81e-17 | 49 |
regional part of nervous system | 5.20e-17 | 54 |
neural tube | 3.40e-16 | 52 |
neural rod | 3.40e-16 | 52 |
future spinal cord | 3.40e-16 | 52 |
neural keel | 3.40e-16 | 52 |
brain | 3.69e-15 | 47 |
future brain | 3.69e-15 | 47 |
regional part of brain | 1.28e-14 | 46 |
anterior neural tube | 5.34e-14 | 40 |
regional part of forebrain | 1.51e-13 | 39 |
forebrain | 1.51e-13 | 39 |
future forebrain | 1.51e-13 | 39 |
tube | 4.45e-11 | 114 |
gray matter | 1.13e-10 | 34 |
embryo | 2.97e-10 | 320 |
brain grey matter | 1.90e-09 | 29 |
regional part of telencephalon | 1.90e-09 | 29 |
telencephalon | 1.90e-09 | 29 |
anatomical conduit | 1.99e-09 | 122 |