Personal tools

FFCP PHASE1:Mm9::chr9:107790467..107790542,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72825
|EntrezGene=72825
|HGNC=
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=Q6PDG8
|UniProt=Q6PDG8
|association_with_transcript=7bp_to_ENSMUST00000035202,NM_028369,uc009rng.2,uc009rnh.2_5end
|association_with_transcript=7bp_to_ENSMUST00000035202,NM_028369,uc009rng.2,uc009rnh.2_5end
|cluster_id=chr9:107790467..107790542,+
|description=CAGE_peak_1_at_Mon1a_5end
|description=CAGE_peak_1_at_Mon1a_5end
|id=chr9:107790467..107790542,+
|id=chr9:107790467..107790542,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!6.37e-14!51;UBERON:0000160!9.04e-14!43;UBERON:0005409!3.06e-12!59;UBERON:0000344!9.19e-09!15;UBERON:0004119!1.62e-08!130;UBERON:0000925!1.62e-08!130;UBERON:0006595!1.62e-08!130;UBERON:0001007!4.26e-08!128;UBERON:0001555!4.26e-08!128;UBERON:0007026!4.26e-08!128;UBERON:0001242!1.24e-07!13;UBERON:0000060!1.24e-07!13;UBERON:0001262!1.24e-07!13;UBERON:0004786!1.24e-07!13;UBERON:0004921!2.28e-07!126;UBERON:0004185!2.28e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.37e-14,51;UBERON:0000160,3.82e-13,31;UBERON:0005409,5.93e-11,47;UBERON:0000344,9.19e-09,15;UBERON:0001242,1.24e-07,13;UBERON:0001262,1.24e-07,13;UBERON:0004786,1.24e-07,13;UBERON:0004119,5.50e-07,118;UBERON:0000925,5.50e-07,118;UBERON:0006595,5.50e-07,118
|phase1_expression=4.16387002472464,52.6952865535435,47.7749201359013,51.7213801334679,49.087781534742,24.6782529710478,32.7057696833736,13.9453189316902,23.65250532148,24.8108397901313,7.19115466547121,6.38177271962691,11.4704489053908,13.4627419725256,2.99798785634096,3.03712901084739,2.09868563438444,8.04428521663506,8.36398044995006,9.76096199135469,9.52484849691981,7.74469419366905,8.8807928307238,32.638454249855,27.9879322901947,40.7704694521664,38.7685796543167,37.0610520219729,38.3847307301875,32.5118867390311,29.9336189384661,5.71527606113668,11.6862309641068,15.8481681015439,10.1098066912946,11.3039558843775,10.0042984568561,15.0671387065287,6.2506827561904,8.89990364755457,8.82347232046521,13.6609096991689,13.5942898848723,8.81277725829041,6.08261587317087,7.15832333430558,18.7773922643529,11.1192829754028,10.1055644057857,8.1660557611199,6.99932108126813,4.31257693094915,11.4092172119261,17.4086914082723,18.1490651536931,5.91696702882678,6.30373567865265,4.64104883049698,8.6996078169627,6.34789175126439,13.3104594736298,7.11573517345177,14.2287167377782,14.8483453351431,24.7216590641744,23.4458437932213,9.58720353658895,9.22123932771731,5.91030790158323,10.2604513132085,8.83364837675805,4.85606673486466,5.96345060569357,7.59442955132715,8.24271050756833,9.19218786610021,5.50579404996943,9.70423769447427,10.752457327937,10.6827893061457,11.9848813119157,8.33461392890816,13.1216009530649,8.4414391504752,7.94550888439413,5.00868595305235,5.12538050876771,8.57437450796383,6.05809546665472,5.66786700800891,10.4351215932604,7.74381489283248,7.47968467078526,13.4925797909454,16.8941868536394,21.9533174677694,12.9208866521212,6.13549161281008,5.19572009205738,4.94675404314476,3.94361575374705,2.56652954828636,2.54805239706646,0,6.71122227134764,6.33399663687746,8.08839112023653,12.7885945285347,5.95557132388495,10.3909497345377,5.89850111004862,4.87144765299426,5.5347719341454,5.27529241934179,4.11560474974967,8.41966161908826,15.8204779349999,13.013942122792,3.5384422077995,4.69123864847487,5.96272099843063,7.27312879702833,33.550517019262,13.1751358655196,12.7762491156208,37.0412730052457,4.31334448221313,3.59941638596045,3.55796635804581,11.5338792341713,10.980014467647,8.04187853522332,10.9509321721134,10.4843337505436,15.584103341967,11.0324058886075,3.05518091550949,8.21086006026614,11.625246887949,17.8875577503503,4.42409506073193,4.59804208866946,2.88099407688559,5.87748789559289,4.08218994907967,4.35586648968489,4.96619140166563,5.95017752699736,5.38919982332106,4.34943984385984,6.15828934573821,5.04150184583422,7.22922847986555,11.4923214952315,9.67176041117334,5.7719937377363,4.91549231119264,6.17634977075316,4.83077948972507,4.76389276831654,3.75241695969754,3.96136535214233,4.26140524053378,4.32881309844288,5.55361606394562,5.58081467400979,8.04820204198858,4.32031766758527,6.08871444679878,5.08919138645195,8.02581214503972,10.9649990568999,8.34290438105992,9.12603647570528,11.565947171027,5.65975368086064,60.1362185030512,34.3785736662608,6.39864751605702,4.64473343720877,7.60318021800351,10.8909103296605,14.0098167622268,18.0714344806931,35.5896796158384,26.3518327558417,18.3474702424197,16.1154742353332,17.9366960149591,39.5480539807857,29.3947747829584,41.4213848369084,3.41402221715547,3.42745537829186,5.63538678365402,3.86937522906097,6.0125271021964,4.76923575254166,5.6280518040589,9.88987991463334,9.26292494264111,12.7099078839455,21.6410417773619,4.00428253718626,4.71741588271687,3.14806957338795,3.24576194221605,3.85883455603867,4.32863948028414,4.89083433666378,3.24270453550071,7.4131581560782,4.31304619582064,8.55924179637558,9.98520553966594,15.1547326768267,11.8402292924462,19.2977408545347,10.7156850296631,2.84237117655727,5.21487924614483,4.75286240170527,5.63256595892405,6.365237782789,7.37935286746643,9.17128144931655,5.83250033192907,6.2010113101657,9.8861956567642,9.5040722535128,9.67035898449015,10.4147322178688,9.04747703635634,6.52686820582452,55.0775985781321,35.3199035270058,14.4495530989013,13.4793439581034,3.27869890753351,13.1284882146274,4.73262329124385,5.0757036758563,4.95473814785438,4.30143836314594,4.23317480756549,3.67999490025482,6.8817819284732,2.04579100537918,2.37172666767914,6.10510501201433,6.24536374916382,4.45164009168138,3.58351310577867,10.2281476242972,17.2568679841952,4.12727081463468,7.55808892411878,8.86443874852721,13.5838870725155,12.604841065701,19.3821219876166,9.08834323693764,7.12994756769443,12.6414703174326,14.7586052004998,13.4076206222643,11.234506989875,5.04171063287669,4.52755393239641,4.28674070063185,5.32020700926821,5.35106452806212,4.27827453565514,5.17590413494819,11.9682571112492,11.6507638975101,31.0945041257496,14.3451040059088,7.42736362801165,9.288190438936,13.4890748723544,13.6236946788401,23.0269860937582,17.4299783889879,6.83483523191411,6.60437977482312,5.92622487583077,3.95573759709851,4.10082683163076,3.66045077130436,5.09935289981566,5.318155188299,4.69879910935041,23.8667654503778,5.69404788446044,8.13277868507395,10.6925287413583,10.245326504709,12.2283035697859,11.8680624818642,14.4643547519338,31.4107130380836,20.8680106999787,22.9895545842163,9.01908701894705,3.28936401296753,3.64008679005615,6.80579159204167,5.42471258606471,5.74450826668646,3.28600268208111,2.99470085141085,2.83120229949419,6.28118714147616,9.79302021276743,9.48033361884535,5.27085559754427,3.59488350076895,6.10627867995637,6.08690765269437,6.15912199821921,5.4087952283986,7.67985541307802,5.85605409699256,5.94413091908999,7.56196388526304,7.30934105548143,10.0060315305943,9.23327527234395,18.1384306892169,5.77163478772568,3.22969883794113,8.562115434568,17.9666322449937,13.7008207079363,12.0880072016395,18.0069438426415,21.0660283694853,7.34177395402186,7.82552902062201,6.87474616127276,6.70227411140382,11.6464028361009,9.06472676867641,6.75022500231806,10.8077088773813,7.25027854374727,9.31968561153276,4.04770655578289,6.3843979744165,7.34154504742777,6.07766792670735,3.77303692730368,7.72142735490059,4.00044110042907,6.79915688888351,7.06022261101994,5.30664144703975,5.32306529769503,7.73367999682912,5.89941497060259,5.57018825922363,6.77738533676237,6.19181798667996,5.79421629724277,6.36600427530227,5.35711671044299,6.03515572551029,4.11443102862498,7.45398385869217,8.34526664815623,4.65108533223451,5.74067220533517,7.1922416707925,7.3171189149109,6.05060336307039,5.83957689537206,3.36685362994643,4.74540072496697,5.31924204828043,9.00308294973317,6.50734732981057,5.5942917184531,11.4912865851455,9.35726433781634,7.73535794573874,6.12122662620299,6.61774257358547,4.86922454802885
|phase1_expression=4.16387002472464,52.6952865535435,47.7749201359013,51.7213801334679,49.087781534742,24.6782529710478,32.7057696833736,13.9453189316902,23.65250532148,24.8108397901313,7.19115466547121,6.38177271962691,11.4704489053908,13.4627419725256,2.99798785634096,3.03712901084739,2.09868563438444,8.04428521663506,8.36398044995006,9.76096199135469,9.52484849691981,7.74469419366905,8.8807928307238,32.638454249855,27.9879322901947,40.7704694521664,38.7685796543167,37.0610520219729,38.3847307301875,32.5118867390311,29.9336189384661,5.71527606113668,11.6862309641068,15.8481681015439,10.1098066912946,11.3039558843775,10.0042984568561,15.0671387065287,6.2506827561904,8.89990364755457,8.82347232046521,13.6609096991689,13.5942898848723,8.81277725829041,6.08261587317087,7.15832333430558,18.7773922643529,11.1192829754028,10.1055644057857,8.1660557611199,6.99932108126813,4.31257693094915,11.4092172119261,17.4086914082723,18.1490651536931,5.91696702882678,6.30373567865265,4.64104883049698,8.6996078169627,6.34789175126439,13.3104594736298,7.11573517345177,14.2287167377782,14.8483453351431,24.7216590641744,23.4458437932213,9.58720353658895,9.22123932771731,5.91030790158323,10.2604513132085,8.83364837675805,4.85606673486466,5.96345060569357,7.59442955132715,8.24271050756833,9.19218786610021,5.50579404996943,9.70423769447427,10.752457327937,10.6827893061457,11.9848813119157,8.33461392890816,13.1216009530649,8.4414391504752,7.94550888439413,5.00868595305235,5.12538050876771,8.57437450796383,6.05809546665472,5.66786700800891,10.4351215932604,7.74381489283248,7.47968467078526,13.4925797909454,16.8941868536394,21.9533174677694,12.9208866521212,6.13549161281008,5.19572009205738,4.94675404314476,3.94361575374705,2.56652954828636,2.54805239706646,0,6.71122227134764,6.33399663687746,8.08839112023653,12.7885945285347,5.95557132388495,10.3909497345377,5.89850111004862,4.87144765299426,5.5347719341454,5.27529241934179,4.11560474974967,8.41966161908826,15.8204779349999,13.013942122792,3.5384422077995,4.69123864847487,5.96272099843063,7.27312879702833,33.550517019262,13.1751358655196,12.7762491156208,37.0412730052457,4.31334448221313,3.59941638596045,3.55796635804581,11.5338792341713,10.980014467647,8.04187853522332,10.9509321721134,10.4843337505436,15.584103341967,11.0324058886075,3.05518091550949,8.21086006026614,11.625246887949,17.8875577503503,4.42409506073193,4.59804208866946,2.88099407688559,5.87748789559289,4.08218994907967,4.35586648968489,4.96619140166563,5.95017752699736,5.38919982332106,4.34943984385984,6.15828934573821,5.04150184583422,7.22922847986555,11.4923214952315,9.67176041117334,5.7719937377363,4.91549231119264,6.17634977075316,4.83077948972507,4.76389276831654,3.75241695969754,3.96136535214233,4.26140524053378,4.32881309844288,5.55361606394562,5.58081467400979,8.04820204198858,4.32031766758527,6.08871444679878,5.08919138645195,8.02581214503972,10.9649990568999,8.34290438105992,9.12603647570528,11.565947171027,5.65975368086064,60.1362185030512,34.3785736662608,6.39864751605702,4.64473343720877,7.60318021800351,10.8909103296605,14.0098167622268,18.0714344806931,35.5896796158384,26.3518327558417,18.3474702424197,16.1154742353332,17.9366960149591,39.5480539807857,29.3947747829584,41.4213848369084,3.41402221715547,3.42745537829186,5.63538678365402,3.86937522906097,6.0125271021964,4.76923575254166,5.6280518040589,9.88987991463334,9.26292494264111,12.7099078839455,21.6410417773619,4.00428253718626,4.71741588271687,3.14806957338795,3.24576194221605,3.85883455603867,4.32863948028414,4.89083433666378,3.24270453550071,7.4131581560782,4.31304619582064,8.55924179637558,9.98520553966594,15.1547326768267,11.8402292924462,19.2977408545347,10.7156850296631,2.84237117655727,5.21487924614483,4.75286240170527,5.63256595892405,6.365237782789,7.37935286746643,9.17128144931655,5.83250033192907,6.2010113101657,9.8861956567642,9.5040722535128,9.67035898449015,10.4147322178688,9.04747703635634,6.52686820582452,55.0775985781321,35.3199035270058,14.4495530989013,13.4793439581034,3.27869890753351,13.1284882146274,4.73262329124385,5.0757036758563,4.95473814785438,4.30143836314594,4.23317480756549,3.67999490025482,6.8817819284732,2.04579100537918,2.37172666767914,6.10510501201433,6.24536374916382,4.45164009168138,3.58351310577867,10.2281476242972,17.2568679841952,4.12727081463468,7.55808892411878,8.86443874852721,13.5838870725155,12.604841065701,19.3821219876166,9.08834323693764,7.12994756769443,12.6414703174326,14.7586052004998,13.4076206222643,11.234506989875,5.04171063287669,4.52755393239641,4.28674070063185,5.32020700926821,5.35106452806212,4.27827453565514,5.17590413494819,11.9682571112492,11.6507638975101,31.0945041257496,14.3451040059088,7.42736362801165,9.288190438936,13.4890748723544,13.6236946788401,23.0269860937582,17.4299783889879,6.83483523191411,6.60437977482312,5.92622487583077,3.95573759709851,4.10082683163076,3.66045077130436,5.09935289981566,5.318155188299,4.69879910935041,23.8667654503778,5.69404788446044,8.13277868507395,10.6925287413583,10.245326504709,12.2283035697859,11.8680624818642,14.4643547519338,31.4107130380836,20.8680106999787,22.9895545842163,9.01908701894705,3.28936401296753,3.64008679005615,6.80579159204167,5.42471258606471,5.74450826668646,3.28600268208111,2.99470085141085,2.83120229949419,6.28118714147616,9.79302021276743,9.48033361884535,5.27085559754427,3.59488350076895,6.10627867995637,6.08690765269437,6.15912199821921,5.4087952283986,7.67985541307802,5.85605409699256,5.94413091908999,7.56196388526304,7.30934105548143,10.0060315305943,9.23327527234395,18.1384306892169,5.77163478772568,3.22969883794113,8.562115434568,17.9666322449937,13.7008207079363,12.0880072016395,18.0069438426415,21.0660283694853,7.34177395402186,7.82552902062201,6.87474616127276,6.70227411140382,11.6464028361009,9.06472676867641,6.75022500231806,10.8077088773813,7.25027854374727,9.31968561153276,4.04770655578289,6.3843979744165,7.34154504742777,6.07766792670735,3.77303692730368,7.72142735490059,4.00044110042907,6.79915688888351,7.06022261101994,5.30664144703975,5.32306529769503,7.73367999682912,5.89941497060259,5.57018825922363,6.77738533676237,6.19181798667996,5.79421629724277,6.36600427530227,5.35711671044299,6.03515572551029,4.11443102862498,7.45398385869217,8.34526664815623,4.65108533223451,5.74067220533517,7.1922416707925,7.3171189149109,6.05060336307039,5.83957689537206,3.36685362994643,4.74540072496697,5.31924204828043,9.00308294973317,6.50734732981057,5.5942917184531,11.4912865851455,9.35726433781634,7.73535794573874,6.12122662620299,6.61774257358547,4.86922454802885
|short_description=p1@Mon1a
|short_description=p1@Mon1a
}}
}}

Latest revision as of 03:48, 26 September 2015

Short description:p1@Mon1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mon1a_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 7bp_to_ENSMUST00000035202, NM_028369, uc009rng.2, uc009rnh.2_5end
EntrezGene:Mon1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mon1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I552.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I647.77
CD326+ enterocyte, pool1.CNhs13542.11848-124I351.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I449.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I832.71
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.95
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E723.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F224.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.47
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.46
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.04
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.36
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.88
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D132.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D227.99
GP2+ M cell, pool1.CNhs13228.11845-124H940.77
GP2+ M cell, pool2.CNhs13231.11846-124I138.77
GP2+ M cell, pool3.CNhs13240.11847-124I237.06
Ileum epithelium, pool1.CNhs13199.10252-104B938.38
Ileum epithelium, pool2.CNhs13232.10253-104C132.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C829.93
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.11
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.08
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.12
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.11
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.41
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I917.41
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A118.15
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C38.70
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C714.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E724.72
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D223.45
Mouse Microglia, donor1.CNhs12629.11718-123C89.59
Mouse Microglia, donor2.CNhs12634.11736-123E89.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.26
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.68
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.57
Mouse Schwann, donor1.CNhs12507.11728-123D96.06
Mouse Schwann, donor2.CNhs12573.11746-123F95.67
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.95
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.79
accessory axillary lymph node, adult.CNhs10475.1063-29H95.96
adrenal gland, adult.CNhs10508.49-24D710.39
adrenal gland, embryo E14.CNhs11038.406-44C55.90
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F55.28
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I38.42
amnion, adult pregnant day17.5.CNhs10488.583-22A815.82
aorta, adult.CNhs10498.46-23H113.01
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F54.69
bone (os femoris), neonate N16.CNhs11225.1525-43A65.96
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H433.55
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I212.78
colon, adult.CNhs10468.36-18H737.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.31
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A411.53
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F18.04
cortex, adult.CNhs10473.12-14D510.95
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F215.58
diencephalon, neonate N30.CNhs11201.1388-42B211.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.21
epididymis, adult.CNhs10490.58-23B211.63
eyeball, adult.CNhs10484.31-12G417.89
eyeball, embryo E12.CNhs11016.345-16C64.42
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C64.08
eyeball, neonate N01.CNhs11140.1532-43E74.36
eyeball, neonate N02.CNhs11205.1551-44G84.97
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E25.39
forelimb, embryo E12.CNhs10600.359-14H24.35
forelimb, embryo E13.CNhs10589.384-1E26.16
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C411.49
forelimb, embryo E18.CNhs11008.1520-43B59.67
gonad, embryo E13.CNhs11044.1564-45I65.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E94.76
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C65.55
heart, embryo E17.CNhs11025.479-18E55.58
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E34.32
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G18.03
heart, neonate N20.CNhs11127.821-26I610.96
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D29.13
hippocampus, adult.CNhs10478.13-16E811.57
hippocampus, neonate N00.CNhs11228.627-43G15.66
intestinal mucosa, adult.CNhs10506.860-29I360.14
intestine, adult.CNhs10496.178-9A334.38
intestine, embryo E12.CNhs11019.1251-16I56.40
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D87.60
intestine, embryo E16.CNhs10585.463-22H410.89
intestine, embryo E17.CNhs10582.482-18D314.01
intestine, embryo E18.CNhs10526.1289-20F718.07
intestine, neonate N00.CNhs11126.644-26D135.59
intestine, neonate N01.CNhs11192.1322-23E926.35
intestine, neonate N06.CNhs11102.688-20B818.35
intestine, neonate N07.CNhs11095.720-20F216.12
intestine, neonate N10.CNhs11098.755-23A517.94
intestine, neonate N20.CNhs11187.827-18D139.55
intestine, neonate N25.CNhs11121.1352-25E329.39
intestine, neonate N30.CNhs11131.1384-42G141.42
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C76.01
kidney, neonate N00.CNhs11214.646-21G74.77
kidney, neonate N10.CNhs11206.758-6D55.63
kidney, neonate N20.CNhs11113.832-19I19.89
kidney, neonate N25.CNhs11122.1353-25F39.26
kidney, neonate N30.CNhs11203.1385-42H112.71
liver, adult pregnant day01.CNhs10466.508-5B221.64
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H64.72
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G27.41
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H28.56
liver, neonate N10.CNhs11115.751-24B99.99
liver, neonate N20.CNhs11220.823-25A315.15
liver, neonate N25.CNhs11198.1368-26H111.84
liver, neonate N30.CNhs11106.1382-42D119.30
lung, adult.CNhs10474.28-22B110.72
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F85.21
lung, embryo E15.CNhs11020.432-17C54.75
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I67.38
lung, neonate N00.CNhs11224.640-42C69.17
lung, neonate N06.CNhs11212.683-20E55.83
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E69.89
lung, neonate N20.CNhs11109.822-18A49.50
lung, neonate N25.CNhs11119.1359-25C79.67
lung, neonate N30.CNhs11133.1394-42H210.41
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B655.08
mammary gland, adult pregnant day19.CNhs10476.588-5H235.32
medulla oblongata, adult.CNhs10477.17-12C214.45
medulla oblongata, neonate N30.CNhs11200.1396-42A313.48
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.13
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I76.25
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G610.23
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F27.56
pancreas, embryo E16.CNhs11003.460-26E58.86
pancreas, embryo E17.CNhs10599.1558-45G313.58
pancreas, embryo E18.CNhs10580.1535-43I712.60
pancreas, neonate N00.CNhs11105.645-26G919.38
pancreas, neonate N01.CNhs11138.1531-43D79.09
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E65.04
pituitary gland, embryo E13.CNhs11009.370-44C74.53
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I711.97
placenta, adult pregnant day17.CNhs10464.577-18G311.65
prostate, adult.CNhs10470.859-1F831.09
skin, adult.CNhs10492.30-1C314.35
skin, neonate N00.CNhs11124.650-25G47.43
skin, neonate N03.CNhs11215.662-22H39.29
skin, neonate N06.CNhs11097.693-20I513.49
skin, neonate N10.CNhs11108.762-6C413.62
small intestine, neonate N16.CNhs11114.790-21I123.03
spinal cord, adult.CNhs10505.24-13C917.43
spleen, adult.CNhs10465.25-2G26.83
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F25.93
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H14.10
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.70
stomach, adult.CNhs10503.33-1H623.87
stomach, embryo E12.CNhs10588.356-43E35.69
stomach, embryo E15.CNhs10603.1252-16G88.13
stomach, embryo E16.CNhs11022.459-17D410.69
stomach, embryo E17.CNhs11006.1035-18D510.25
stomach, embryo E18.CNhs10999.1286-20C612.23
stomach, neonate N03.CNhs11193.1340-24B811.87
stomach, neonate N07.CNhs11210.718-18A914.46
stomach, neonate N25.CNhs11104.1355-25E431.41
stomach, neonate N30.CNhs11134.1386-42I120.87
submandibular gland, adult.CNhs10469.59-29C122.99
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G56.81
testis, embryo E17.CNhs11029.486-18I55.42
testis, embryo E18.CNhs11027.503-18G55.74
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H36.28
testis, neonate N30.CNhs11130.1391-42E29.79
thymus, adult.CNhs10471.38-12B59.48
thymus, embryo E14.CNhs11041.402-44I45.27
thymus, embryo E15.CNhs11005.430-45I23.59
thymus, embryo E16.CNhs11002.456-26C56.11
thymus, embryo E17.CNhs10581.478-18C16.09
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F85.41
thymus, neonate N03.CNhs11137.2104-43C77.68
thymus, neonate N06.CNhs11197.681-26C45.86
thymus, neonate N07.CNhs11211.713-19D35.94
thymus, neonate N10.CNhs11194.748-24E47.56
thymus, neonate N20.CNhs11186.820-7A27.31
thymus, neonate N25.CNhs11125.1362-25G710.01
thymus, neonate N30.CNhs11132.1393-42G29.23
tongue, adult.CNhs10499.32-1B418.14
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.56
urinary bladder, adult.CNhs10481.879-12E417.97
uterus, adult pregnant day19.CNhs10497.590-15F513.70
uterus, adult.CNhs10509.92-27E512.09
vagina, adult.CNhs10502.89-27D518.01
vesicular gland, adult.CNhs10491.51-27F821.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I84.05
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H27.34
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.19
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.32
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F95.59
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C66.12
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B44.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism6.37e-1451
intestine3.82e-1331
gastrointestinal system5.93e-1147
mucosa9.19e-0915
intestinal mucosa1.24e-0713
wall of intestine1.24e-0713
gastrointestinal system mucosa1.24e-0713
endoderm-derived structure5.50e-07118
endoderm5.50e-07118
presumptive endoderm5.50e-07118
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:107790467..107790542,%2B&oldid=4231453"