FFCP PHASE1:Mm9::chr19:6984624..6984632,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54683 | |EntrezGene=54683 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt=P99029 | |UniProt=P99029 | ||
|association_with_transcript=-28bp_to_ENSMUST00000025904_5end | |association_with_transcript=-28bp_to_ENSMUST00000025904_5end | ||
|cluster_id=chr19:6984624..6984632,- | |||
|description=CAGE_peak_14_at_Prdx5_5end | |description=CAGE_peak_14_at_Prdx5_5end | ||
|id=chr19:6984624..6984632,- | |id=chr19:6984624..6984632,- | ||
|ontology_enrichment_celltype=CL:0000624!6.78e-08!8 | |ontology_enrichment_celltype=CL:0000624!6.78e-08!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002092,2.90e-09,3;CL:0002540,2.90e-09,3;CL:0000624,9.77e-08,8;CL:0000791,6.25e-07,9;CL:0000789,6.25e-07,9;CL:0002420,6.25e-07,9;CL:0002419,6.25e-07,9;CL:0000790,6.25e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.63e-09,3;DOID:4045,1.63e-09,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0,0,0.516493293766305,0.84473233291,0.936258105287974,3.25314139628459,1.67521533890206,0.342401459862411,0.961624426608971,0,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0.850432901510698,0,0,0.159992422793407,0,1.14846392823004,0.430761996159075,0.646413698057667,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0,1.67412652294763,0.7813353445238,2.09409497589519,0,2.04913645487534,1.45653105909346,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.671130424230945,1.45072428402269,0,0,0,0,0,0,0.633831403506179,0,0,0,1.97773272513395,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.506719730950197,0,0.45673551887624,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0.20778804455956,0.162241263067758,0,0.248813941220186,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0.397912944082302,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0.296452627087149,0,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0,0,0.390267295715598,0,0.221464689648775,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,1.1659233465194,0.18542530201051,0,0,0,0.376736914009382,0.136694227721025,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,7.32800820289447,0,0,0.388902376688095,0.258319646955462,0.168956125490778,0,0.2604087696879,0.104859344425711,1.93267296660805,2.01621004380506,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0.403865799792591,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.226730383615211,0.221985953374065,0.538283139656854,0,0,0,0,0,0,0.564751842617067,0,0,0.68741272937475,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0,0,0.516493293766305,0.84473233291,0.936258105287974,3.25314139628459,1.67521533890206,0.342401459862411,0.961624426608971,0,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0.850432901510698,0,0,0.159992422793407,0,1.14846392823004,0.430761996159075,0.646413698057667,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0,1.67412652294763,0.7813353445238,2.09409497589519,0,2.04913645487534,1.45653105909346,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.671130424230945,1.45072428402269,0,0,0,0,0,0,0.633831403506179,0,0,0,1.97773272513395,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.506719730950197,0,0.45673551887624,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0.20778804455956,0.162241263067758,0,0.248813941220186,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0.397912944082302,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0.296452627087149,0,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0,0,0.390267295715598,0,0.221464689648775,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,1.1659233465194,0.18542530201051,0,0,0,0.376736914009382,0.136694227721025,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,7.32800820289447,0,0,0.388902376688095,0.258319646955462,0.168956125490778,0,0.2604087696879,0.104859344425711,1.93267296660805,2.01621004380506,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0.403865799792591,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.226730383615211,0.221985953374065,0.538283139656854,0,0,0,0,0,0,0.564751842617067,0,0,0.68741272937475,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p14@Prdx5 | |short_description=p14@Prdx5 | ||
}} | }} |
Latest revision as of 03:23, 26 September 2015
Short description: | p14@Prdx5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Prdx5_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -28bp_to_ENSMUST00000025904_5end |
EntrezGene: | Prdx5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 2.90e-09 | 3 |
mesenchymal stem cell of the bone marrow | 2.90e-09 | 3 |
CD4-positive, alpha-beta T cell | 9.77e-08 | 8 |
mature alpha-beta T cell | 6.25e-07 | 9 |
alpha-beta T cell | 6.25e-07 | 9 |
immature T cell | 6.25e-07 | 9 |
mature T cell | 6.25e-07 | 9 |
immature alpha-beta T cell | 6.25e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.63e-09 | 3 |
muscle cancer | 1.63e-09 | 3 |