FFCP PHASE1:Mm9::chr19:6400611..6400622,+: Difference between revisions
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{{FFCP|EntrezGene=19395|HGNC=|MCL_coexpression_id=170|UniProt=D3YZP4|association_with_transcript=0bp_to_ENSMUST00000113467_5end|description=CAGE_peak_12_at_Rasgrp2_5end|id=chr19:6400611..6400622,+|ontology_enrichment_celltype=CL:0000791!1.07e-20!9;CL:0000789!1.07e-20!9;CL:0002420!1.07e-20!9;CL:0002419!1.07e-20!9;CL:0000790!1.07e-20!9;CL:0000838!7.79e-20!12;CL:0000542!3.24e-18!13;CL:0000051!3.24e-18!13;CL:0000624!3.12e-17!8;CL:0000084!9.11e-17!11;CL:0000827!9.11e-17!11;CL:0000738!1.22e-13!17;CL:0002087!1.22e-13!17;CL:0002031!4.26e-11!25;CL:0000893!1.21e-10!6;CL:0002489!1.21e-10!6;CL:0000898!1.21e-10!6;CL:0000809!1.21e-10!6;CL:0000810!1.21e-10!6;CL:0000895!1.21e-10!6;CL:0000808!1.21e-10!6;CL:0000894!1.21e-10!6;CL:0000806!1.21e-10!6;CL:0000807!1.21e-10!6;CL:0000805!1.21e-10!6;CL:0002425!1.21e-10!6;CL:0002436!1.21e-10!6;CL:0002427!1.21e-10!6;CL:0002428!1.21e-10!6;CL:0002429!1.21e-10!6;CL:0002433!1.21e-10!6;CL:0002431!1.21e-10!6;CL:0002432!1.21e-10!6;CL:0000988!3.46e-10!32;CL:0002032!3.46e-10!32;CL:0000037!3.46e-10!32;CL:0000566!3.46e-10!32;CL:0000837!3.46e-10!32|ontology_enrichment_celltype_v019_2=CL:0000791,2.18e-59,9;CL:0000789,2.18e-59,9;CL:0002420,2.18e-59,9;CL:0002419,2.18e-59,9;CL:0000790,2.18e-59,9;CL:0000838,7.26e-58,12;CL:0000542,1.94e-53,13;CL:0000051,1.94e-53,13;CL:0000624,4.64e-49,8;CL:0000084,1.18e-48,11;CL:0000827,1.18e-48,11;CL:0000738,6.20e-41,17;CL:0002087,6.20e-41,17;CL:0000893,2.03e-29,6;CL:0002489,2.03e-29,6;CL:0000898,2.03e-29,6;CL:0000809,2.03e-29,6;CL:0000810,2.03e-29,6;CL:0000895,2.03e-29,6;CL:0000808,2.03e-29,6;CL:0000894,2.03e-29,6;CL:0000806,2.03e-29,6;CL:0000807,2.03e-29,6;CL:0000805,2.03e-29,6;CL:0002425,2.03e-29,6;CL:0002436,2.03e-29,6;CL:0002427,2.03e-29,6;CL:0002428,2.03e-29,6;CL:0002429,2.03e-29,6;CL:0002433,2.03e-29,6;CL:0002431,2.03e-29,6;CL:0002432,2.03e-29,6;CL:0002031,6.66e-28,25;CL:0000988,7.89e-22,32;CL:0002032,7.89e-22,32;CL:0000037,7.89e-22,32;CL:0000837,7.89e-22,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000625,1.55e-12,1;CL:0000815,4.30e-12,1;CL:0000792,4.30e-12,1;CL:0000945,7.11e-12,1;CL:0000236,7.11e-12,1;CL:0000826,7.11e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000369!2.30e-11!5;UBERON:0002435!2.30e-11!5;UBERON:0000204!2.30e-11!5;UBERON:0010082!2.30e-11!5;UBERON:0002420!7.47e-11!8;UBERON:0007245!7.47e-11!8;UBERON:0010009!7.47e-11!8;UBERON:0010011!7.47e-11!8;UBERON:0000454!7.47e-11!8;UBERON:0002370!4.28e-09!23;UBERON:0000974!4.28e-09!23;UBERON:0004807!4.28e-09!23;UBERON:0005058!4.28e-09!23;UBERON:0003351!4.28e-09!23;UBERON:0009113!4.28e-09!23;UBERON:0003295!4.28e-09!23;UBERON:0009722!4.28e-09!23;UBERON:0005562!4.28e-09!23;UBERON:0007690!4.28e-09!23;UBERON:0006562!1.14e-08!24;UBERON:0003408!1.14e-08!24;UBERON:0001557!1.14e-08!24;UBERON:0001042!1.14e-08!24;UBERON:0008814!1.14e-08!24;UBERON:0009145!1.14e-08!24;UBERON:0000072!1.42e-07!27;UBERON:0004177!5.67e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.33e-15,46;UBERON:0002370,5.10e-08,23;UBERON:0000974,5.10e-08,23;UBERON:0004807,5.10e-08,23;UBERON:0005058,5.10e-08,23;UBERON:0003351,5.10e-08,23;UBERON:0009113,5.10e-08,23;UBERON:0003295,5.10e-08,23;UBERON:0009722,5.10e-08,23;UBERON:0005562,5.10e-08,23;UBERON:0007690,5.10e-08,23;UBERON:0006562,1.06e-07,24;UBERON:0003408,1.06e-07,24;UBERON:0001557,1.06e-07,24;UBERON:0001042,1.06e-07,24;UBERON:0008814,1.06e-07,24;UBERON:0009145,1.06e-07,24;UBERON:0000072,7.01e-07,27|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,2.81577444303333,1.87251621057595,0,0,4.10881751834894,4.89554253546385,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,22.4862264023517,13.4437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0.457500602818626,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.15241361331,0.100826185136841,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p12@Rasgrp2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19395 | |||
|HGNC= | |||
|MCL_coexpression_id=170 | |||
|TSSclassifier=NA | |||
|UniProt=D3YZP4 | |||
|association_with_transcript=0bp_to_ENSMUST00000113467_5end | |||
|cluster_id=chr19:6400611..6400622,+ | |||
|description=CAGE_peak_12_at_Rasgrp2_5end | |||
|id=chr19:6400611..6400622,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.07e-20!9;CL:0000789!1.07e-20!9;CL:0002420!1.07e-20!9;CL:0002419!1.07e-20!9;CL:0000790!1.07e-20!9;CL:0000838!7.79e-20!12;CL:0000542!3.24e-18!13;CL:0000051!3.24e-18!13;CL:0000624!3.12e-17!8;CL:0000084!9.11e-17!11;CL:0000827!9.11e-17!11;CL:0000738!1.22e-13!17;CL:0002087!1.22e-13!17;CL:0002031!4.26e-11!25;CL:0000893!1.21e-10!6;CL:0002489!1.21e-10!6;CL:0000898!1.21e-10!6;CL:0000809!1.21e-10!6;CL:0000810!1.21e-10!6;CL:0000895!1.21e-10!6;CL:0000808!1.21e-10!6;CL:0000894!1.21e-10!6;CL:0000806!1.21e-10!6;CL:0000807!1.21e-10!6;CL:0000805!1.21e-10!6;CL:0002425!1.21e-10!6;CL:0002436!1.21e-10!6;CL:0002427!1.21e-10!6;CL:0002428!1.21e-10!6;CL:0002429!1.21e-10!6;CL:0002433!1.21e-10!6;CL:0002431!1.21e-10!6;CL:0002432!1.21e-10!6;CL:0000988!3.46e-10!32;CL:0002032!3.46e-10!32;CL:0000037!3.46e-10!32;CL:0000566!3.46e-10!32;CL:0000837!3.46e-10!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.18e-59,9;CL:0000789,2.18e-59,9;CL:0002420,2.18e-59,9;CL:0002419,2.18e-59,9;CL:0000790,2.18e-59,9;CL:0000838,7.26e-58,12;CL:0000542,1.94e-53,13;CL:0000051,1.94e-53,13;CL:0000624,4.64e-49,8;CL:0000084,1.18e-48,11;CL:0000827,1.18e-48,11;CL:0000738,6.20e-41,17;CL:0002087,6.20e-41,17;CL:0000893,2.03e-29,6;CL:0002489,2.03e-29,6;CL:0000898,2.03e-29,6;CL:0000809,2.03e-29,6;CL:0000810,2.03e-29,6;CL:0000895,2.03e-29,6;CL:0000808,2.03e-29,6;CL:0000894,2.03e-29,6;CL:0000806,2.03e-29,6;CL:0000807,2.03e-29,6;CL:0000805,2.03e-29,6;CL:0002425,2.03e-29,6;CL:0002436,2.03e-29,6;CL:0002427,2.03e-29,6;CL:0002428,2.03e-29,6;CL:0002429,2.03e-29,6;CL:0002433,2.03e-29,6;CL:0002431,2.03e-29,6;CL:0002432,2.03e-29,6;CL:0002031,6.66e-28,25;CL:0000988,7.89e-22,32;CL:0002032,7.89e-22,32;CL:0000037,7.89e-22,32;CL:0000837,7.89e-22,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000625,1.55e-12,1;CL:0000815,4.30e-12,1;CL:0000792,4.30e-12,1;CL:0000945,7.11e-12,1;CL:0000236,7.11e-12,1;CL:0000826,7.11e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!2.30e-11!5;UBERON:0002435!2.30e-11!5;UBERON:0000204!2.30e-11!5;UBERON:0010082!2.30e-11!5;UBERON:0002420!7.47e-11!8;UBERON:0007245!7.47e-11!8;UBERON:0010009!7.47e-11!8;UBERON:0010011!7.47e-11!8;UBERON:0000454!7.47e-11!8;UBERON:0002370!4.28e-09!23;UBERON:0000974!4.28e-09!23;UBERON:0004807!4.28e-09!23;UBERON:0005058!4.28e-09!23;UBERON:0003351!4.28e-09!23;UBERON:0009113!4.28e-09!23;UBERON:0003295!4.28e-09!23;UBERON:0009722!4.28e-09!23;UBERON:0005562!4.28e-09!23;UBERON:0007690!4.28e-09!23;UBERON:0006562!1.14e-08!24;UBERON:0003408!1.14e-08!24;UBERON:0001557!1.14e-08!24;UBERON:0001042!1.14e-08!24;UBERON:0008814!1.14e-08!24;UBERON:0009145!1.14e-08!24;UBERON:0000072!1.42e-07!27;UBERON:0004177!5.67e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.33e-15,46;UBERON:0002370,5.10e-08,23;UBERON:0000974,5.10e-08,23;UBERON:0004807,5.10e-08,23;UBERON:0005058,5.10e-08,23;UBERON:0003351,5.10e-08,23;UBERON:0009113,5.10e-08,23;UBERON:0003295,5.10e-08,23;UBERON:0009722,5.10e-08,23;UBERON:0005562,5.10e-08,23;UBERON:0007690,5.10e-08,23;UBERON:0006562,1.06e-07,24;UBERON:0003408,1.06e-07,24;UBERON:0001557,1.06e-07,24;UBERON:0001042,1.06e-07,24;UBERON:0008814,1.06e-07,24;UBERON:0009145,1.06e-07,24;UBERON:0000072,7.01e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,2.81577444303333,1.87251621057595,0,0,4.10881751834894,4.89554253546385,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,22.4862264023517,13.4437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0.457500602818626,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.15241361331,0.100826185136841,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p12@Rasgrp2 | |||
}} |
Latest revision as of 03:08, 26 September 2015
Short description: | p12@Rasgrp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Rasgrp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:170 |
Association with transcript: | 0bp_to_ENSMUST00000113467_5end |
EntrezGene: | Rasgrp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.33e-15 | 46 |
thymus | 5.10e-08 | 23 |
neck | 5.10e-08 | 23 |
respiratory system epithelium | 5.10e-08 | 23 |
hemolymphoid system gland | 5.10e-08 | 23 |
pharyngeal epithelium | 5.10e-08 | 23 |
thymic region | 5.10e-08 | 23 |
pharyngeal gland | 5.10e-08 | 23 |
entire pharyngeal arch endoderm | 5.10e-08 | 23 |
thymus primordium | 5.10e-08 | 23 |
early pharyngeal endoderm | 5.10e-08 | 23 |
pharynx | 1.06e-07 | 24 |
gland of gut | 1.06e-07 | 24 |
upper respiratory tract | 1.06e-07 | 24 |
chordate pharynx | 1.06e-07 | 24 |
pharyngeal arch system | 1.06e-07 | 24 |
pharyngeal region of foregut | 1.06e-07 | 24 |
segment of respiratory tract | 7.01e-07 | 27 |