Personal tools

FFCP PHASE1:Mm9::chr10:59079415..59079443,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr10:59079415..59079443,-
|DHSsupport=NA
|short_description=p1@Ccdc109a
|DPIdataset=NA
|description=CAGE_peak_1_at_Ccdc109a_5end
|association_with_transcript=0bp_to_ENSMUST00000020312,ENSMUST00000161168,ENSMUST00000161435,NM_001033259,uc007fdt.2,uc007fdu.1_5end
|EntrezGene=215999
|EntrezGene=215999
|HGNC=
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=Q3UMR5,E0CYL3
|UniProt=Q3UMR5,E0CYL3
|association_with_transcript=0bp_to_ENSMUST00000020312,ENSMUST00000161168,ENSMUST00000161435,NM_001033259,uc007fdt.2,uc007fdu.1_5end
|cluster_id=chr10:59079415..59079443,-
|description=CAGE_peak_1_at_Ccdc109a_5end
|id=chr10:59079415..59079443,-
|ontology_enrichment_celltype=CL:0002076!1.33e-07!15
|ontology_enrichment_celltype_v019_2=CL:0002076,1.33e-07,15
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!3.85e-10!15;UBERON:0001242!4.62e-09!13;UBERON:0000060!4.62e-09!13;UBERON:0001262!4.62e-09!13;UBERON:0004786!4.62e-09!13;UBERON:0000160!1.90e-08!43;UBERON:0005409!3.29e-08!59
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.24e-16,31;UBERON:0005409,4.17e-14,47;UBERON:0000344,3.85e-10,15;UBERON:0001242,4.62e-09,13;UBERON:0001262,4.62e-09,13;UBERON:0004786,4.62e-09,13
|phase1_expression=26.2644109251862,405.509423676938,447.719251559303,386.246797838822,480.359005018547,188.192663813228,169.135551791161,38.7369970324729,43.7852925891684,56.8776798962444,41.6059662787977,52.7293970959174,23.9681021903688,30.5097204442301,9.32707333083856,13.5658429151183,6.99561878128147,15.7731082679119,17.9619908023518,18.2487550273153,29.5950649725723,8.43973085207525,4.17919662622297,163.352263672068,172.056960800378,337.648394899632,258.457197695445,254.040583336663,301.567166677265,292.10292039176,169.623840651308,6.98533740805594,4.92051830067656,47.5445043046316,85.5000794463773,81.4549762256613,86.7719764115069,218.892042875403,104.698936166189,154.963028216244,175.292983433242,200.132327092825,182.066382386683,56.7794649069854,46.9375191546352,41.2980192363784,61.0265248591471,89.1722889596026,79.7460843326133,64.5507264926621,59.3542427691537,56.0635001023389,19.6305649087552,26.8383992544197,8.73843877770406,58.9124108522319,58.4528217475064,26.2992767061496,24.8849246857305,30.1524858185059,25.9870875437533,46.082856361402,49.8005085822238,29.2467408116455,20.7661936139065,29.8401648277362,42.5432156936135,49.5641613864805,20.4268536247701,21.0609263797437,17.8776217148675,72.5553500385661,52.7875812874356,22.4158162563366,20.4150853268843,16.5459381589804,45.1475112097494,45.9674417106676,40.7057313129045,34.02666223439,31.6547246864337,19.2737947106001,33.7811428791671,29.2636557216474,35.6019917319968,58.9257170947335,51.2538050876771,52.5646437227348,17.3412982732991,14.7364542208232,60.291813649949,30.9752595713299,24.478968013479,30.7630819233556,33.1385972898311,26.4335863387428,51.6835466084847,94.2479683856659,64.4269291415115,56.8876714961648,15.3519327556582,80.8456807710202,33.1246811618639,78.2173373468664,68.8441510415661,70.1806827366023,83.917057872454,71.8216603432887,27.9652914338945,46.4623895272902,24.9818870543236,34.7090645275841,37.5903260527375,34.3647620459979,39.5098055975968,43.6063071913974,51.4165532887498,36.5836373007376,78.7303391235388,102.236649166763,55.2103796150984,47.5177748072518,216.214443013022,55.9211322292055,85.0353629662628,272.317220852358,18.4515291739117,8.39863823390771,15.8837783841331,32.3547781114417,48.0375632959558,67.4763870846082,44.4990259692228,50.8873760087358,38.4407882435186,49.8080677618016,40.1247093570246,36.8244633005875,11.1198013710817,35.1437899330412,26.0240885925407,21.380895712313,25.0286360429435,34.2099936487073,41.50226448231,42.1494139737156,38.7925139677277,56.9147415625834,23.0657752438141,49.9240051643043,60.1752844640705,49.7574312610595,56.721638842022,52.9343293113693,49.1819306014985,23.0879749509452,18.9597560574573,27.0215302470451,37.2254184208226,32.7258720606093,34.24080475724,33.6716054932098,34.8014761310259,28.9243420668684,34.8643675125475,30.9270146518042,31.1197145623558,32.4607651780731,39.3298041293218,36.6093444896382,36.4809642956351,40.2049965419664,38.2017200606428,41.0671641406738,59.512055443648,44.6606017726094,446.065357028127,273.441885930105,37.9653085952716,38.0868141851119,63.531658431792,80.2700428000903,75.386156863411,94.3519105518293,272.37968132655,108.207213253675,102.29342998171,106.043799597933,114.833847313162,257.961170283762,275.143737490486,300.703322614094,25.9845024305722,28.7906251776517,46.210171625963,33.6024690944769,32.3900653569935,35.8394039639528,49.5142085682935,42.659332766105,45.2156336183159,38.2531208157582,31.1275258441506,21.5230186373761,19.0662225259807,17.7641068784034,23.3289139596778,27.2530190520231,29.2819729548633,26.7557407829254,23.9960135627052,37.3403521935791,33.0666875012915,42.0519270865409,42.4371235435802,43.6961458848503,39.8262258018645,45.3496910081565,41.1999614071528,23.3074436477696,28.5188708773545,30.2146252679835,24.8771663185812,33.3337452309213,33.3261097240419,45.4661399508671,43.1920294850963,42.9641497918623,40.6609660076592,43.2599150849548,38.3360659742288,41.2249816957308,21.1107797514981,11.4220193601929,24.0964493779328,19.3155722413313,38.2110404170945,39.3831266949803,45.5739148147158,83.3154059774431,17.9839685067266,16.3984272604588,23.9119971483407,10.5146271099123,8.91194696329577,9.34152551603147,11.7395103485719,16.3663280430335,15.8115111178609,55.2672664245508,32.3623394274852,34.188595904113,38.6042093667975,38.1080984066557,30.5313818181915,20.3935734370184,22.9765903293211,26.5933162455816,25.6912646806272,22.1353306519628,39.5395288547378,25.0838273339479,34.2237483249332,30.97160227771,22.1379078007497,27.8465966770104,33.703520969625,21.6073312837572,30.1405733213818,37.0803070604655,41.3202744386497,41.0248280484762,37.6817257178857,34.1000743008351,38.0168167063211,56.1354987789123,33.7408449024092,36.1100893941841,44.7256461947658,37.4543263803848,28.5299902167496,37.0958433423838,225.023205878245,42.4623941604067,23.7510524309015,23.9408766837338,24.4456776128019,33.529585346835,22.9646302571322,19.6749228957609,21.2473037492319,20.2929605869304,20.0389962016414,145.109933938297,36.22047126504,43.9170048993993,58.3228840437727,63.353753692384,65.9454942513456,71.6129679303398,86.7034750558774,127.99865563019,221.123144435799,13.0481255748254,4.50954350947352,26.0158790116523,24.3223980971933,25.4731056730702,17.1782565225382,21.9642963138012,23.0020187745678,21.7441322689397,12.1636839533825,5.31485065817213,12.9613502816039,34.7612232690996,20.8806971748869,20.4394804758006,18.0589943939135,27.2120577414572,23.245718509408,31.4912077742318,32.1963169240578,34.0256936325258,34.1406493814399,38.3139503519994,42.5890938832718,41.9483629551836,44.5300997311778,86.6110065410107,15.7610026895586,17.0456327558004,19.1388462655049,126.732373685117,41.4778270747112,42.6743284542728,31.9408884827808,23.5738888896621,43.4858918815141,42.8102469951675,37.2382083735608,41.0729105801413,21.2375581128899,36.2589070747056,33.0761025113585,29.2708782095743,31.2668262199101,34.6899408873719,24.1824519871132,27.9317411380722,36.3662580256306,51.7817307355466,50.0975458680878,60.8522012969547,57.5619025006183,59.5441315420404,65.7884379663221,62.9216057291856,62.6093870728892,63.9443297298798,60.8669798554236,63.7050266428449,64.0405478855088,61.9181798667996,60.6075024691594,60.7664044460671,74.5875480453985,52.2556166477111,57.9449036531352,63.0039111865648,57.224685587357,63.6617304849599,56.1833001079524,61.4302053293571,55.7930317261956,58.4014759392011,59.6180059783333,57.7976539807471,61.2156693520739,63.9294090617407,51.5631114393809,63.679041727432,53.0493180198139,49.9621155875892,60.3543549789154,63.6018319982963,87.8013444195991,69.0451141844083,69.328482850506
|phase1_expression=26.2644109251862,405.509423676938,447.719251559303,386.246797838822,480.359005018547,188.192663813228,169.135551791161,38.7369970324729,43.7852925891684,56.8776798962444,41.6059662787977,52.7293970959174,23.9681021903688,30.5097204442301,9.32707333083856,13.5658429151183,6.99561878128147,15.7731082679119,17.9619908023518,18.2487550273153,29.5950649725723,8.43973085207525,4.17919662622297,163.352263672068,172.056960800378,337.648394899632,258.457197695445,254.040583336663,301.567166677265,292.10292039176,169.623840651308,6.98533740805594,4.92051830067656,47.5445043046316,85.5000794463773,81.4549762256613,86.7719764115069,218.892042875403,104.698936166189,154.963028216244,175.292983433242,200.132327092825,182.066382386683,56.7794649069854,46.9375191546352,41.2980192363784,61.0265248591471,89.1722889596026,79.7460843326133,64.5507264926621,59.3542427691537,56.0635001023389,19.6305649087552,26.8383992544197,8.73843877770406,58.9124108522319,58.4528217475064,26.2992767061496,24.8849246857305,30.1524858185059,25.9870875437533,46.082856361402,49.8005085822238,29.2467408116455,20.7661936139065,29.8401648277362,42.5432156936135,49.5641613864805,20.4268536247701,21.0609263797437,17.8776217148675,72.5553500385661,52.7875812874356,22.4158162563366,20.4150853268843,16.5459381589804,45.1475112097494,45.9674417106676,40.7057313129045,34.02666223439,31.6547246864337,19.2737947106001,33.7811428791671,29.2636557216474,35.6019917319968,58.9257170947335,51.2538050876771,52.5646437227348,17.3412982732991,14.7364542208232,60.291813649949,30.9752595713299,24.478968013479,30.7630819233556,33.1385972898311,26.4335863387428,51.6835466084847,94.2479683856659,64.4269291415115,56.8876714961648,15.3519327556582,80.8456807710202,33.1246811618639,78.2173373468664,68.8441510415661,70.1806827366023,83.917057872454,71.8216603432887,27.9652914338945,46.4623895272902,24.9818870543236,34.7090645275841,37.5903260527375,34.3647620459979,39.5098055975968,43.6063071913974,51.4165532887498,36.5836373007376,78.7303391235388,102.236649166763,55.2103796150984,47.5177748072518,216.214443013022,55.9211322292055,85.0353629662628,272.317220852358,18.4515291739117,8.39863823390771,15.8837783841331,32.3547781114417,48.0375632959558,67.4763870846082,44.4990259692228,50.8873760087358,38.4407882435186,49.8080677618016,40.1247093570246,36.8244633005875,11.1198013710817,35.1437899330412,26.0240885925407,21.380895712313,25.0286360429435,34.2099936487073,41.50226448231,42.1494139737156,38.7925139677277,56.9147415625834,23.0657752438141,49.9240051643043,60.1752844640705,49.7574312610595,56.721638842022,52.9343293113693,49.1819306014985,23.0879749509452,18.9597560574573,27.0215302470451,37.2254184208226,32.7258720606093,34.24080475724,33.6716054932098,34.8014761310259,28.9243420668684,34.8643675125475,30.9270146518042,31.1197145623558,32.4607651780731,39.3298041293218,36.6093444896382,36.4809642956351,40.2049965419664,38.2017200606428,41.0671641406738,59.512055443648,44.6606017726094,446.065357028127,273.441885930105,37.9653085952716,38.0868141851119,63.531658431792,80.2700428000903,75.386156863411,94.3519105518293,272.37968132655,108.207213253675,102.29342998171,106.043799597933,114.833847313162,257.961170283762,275.143737490486,300.703322614094,25.9845024305722,28.7906251776517,46.210171625963,33.6024690944769,32.3900653569935,35.8394039639528,49.5142085682935,42.659332766105,45.2156336183159,38.2531208157582,31.1275258441506,21.5230186373761,19.0662225259807,17.7641068784034,23.3289139596778,27.2530190520231,29.2819729548633,26.7557407829254,23.9960135627052,37.3403521935791,33.0666875012915,42.0519270865409,42.4371235435802,43.6961458848503,39.8262258018645,45.3496910081565,41.1999614071528,23.3074436477696,28.5188708773545,30.2146252679835,24.8771663185812,33.3337452309213,33.3261097240419,45.4661399508671,43.1920294850963,42.9641497918623,40.6609660076592,43.2599150849548,38.3360659742288,41.2249816957308,21.1107797514981,11.4220193601929,24.0964493779328,19.3155722413313,38.2110404170945,39.3831266949803,45.5739148147158,83.3154059774431,17.9839685067266,16.3984272604588,23.9119971483407,10.5146271099123,8.91194696329577,9.34152551603147,11.7395103485719,16.3663280430335,15.8115111178609,55.2672664245508,32.3623394274852,34.188595904113,38.6042093667975,38.1080984066557,30.5313818181915,20.3935734370184,22.9765903293211,26.5933162455816,25.6912646806272,22.1353306519628,39.5395288547378,25.0838273339479,34.2237483249332,30.97160227771,22.1379078007497,27.8465966770104,33.703520969625,21.6073312837572,30.1405733213818,37.0803070604655,41.3202744386497,41.0248280484762,37.6817257178857,34.1000743008351,38.0168167063211,56.1354987789123,33.7408449024092,36.1100893941841,44.7256461947658,37.4543263803848,28.5299902167496,37.0958433423838,225.023205878245,42.4623941604067,23.7510524309015,23.9408766837338,24.4456776128019,33.529585346835,22.9646302571322,19.6749228957609,21.2473037492319,20.2929605869304,20.0389962016414,145.109933938297,36.22047126504,43.9170048993993,58.3228840437727,63.353753692384,65.9454942513456,71.6129679303398,86.7034750558774,127.99865563019,221.123144435799,13.0481255748254,4.50954350947352,26.0158790116523,24.3223980971933,25.4731056730702,17.1782565225382,21.9642963138012,23.0020187745678,21.7441322689397,12.1636839533825,5.31485065817213,12.9613502816039,34.7612232690996,20.8806971748869,20.4394804758006,18.0589943939135,27.2120577414572,23.245718509408,31.4912077742318,32.1963169240578,34.0256936325258,34.1406493814399,38.3139503519994,42.5890938832718,41.9483629551836,44.5300997311778,86.6110065410107,15.7610026895586,17.0456327558004,19.1388462655049,126.732373685117,41.4778270747112,42.6743284542728,31.9408884827808,23.5738888896621,43.4858918815141,42.8102469951675,37.2382083735608,41.0729105801413,21.2375581128899,36.2589070747056,33.0761025113585,29.2708782095743,31.2668262199101,34.6899408873719,24.1824519871132,27.9317411380722,36.3662580256306,51.7817307355466,50.0975458680878,60.8522012969547,57.5619025006183,59.5441315420404,65.7884379663221,62.9216057291856,62.6093870728892,63.9443297298798,60.8669798554236,63.7050266428449,64.0405478855088,61.9181798667996,60.6075024691594,60.7664044460671,74.5875480453985,52.2556166477111,57.9449036531352,63.0039111865648,57.224685587357,63.6617304849599,56.1833001079524,61.4302053293571,55.7930317261956,58.4014759392011,59.6180059783333,57.7976539807471,61.2156693520739,63.9294090617407,51.5631114393809,63.679041727432,53.0493180198139,49.9621155875892,60.3543549789154,63.6018319982963,87.8013444195991,69.0451141844083,69.328482850506
|short_description=p1@Ccdc109a
}}
}}

Latest revision as of 02:56, 26 September 2015

Short description:p1@Ccdc109a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccdc109a_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_ENSMUST00000020312, ENSMUST00000161168, ENSMUST00000161435, NM_001033259, uc007fdt.2, uc007fdu.1_5end
EntrezGene:Ccdc109a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ccdc109a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5405.51
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6447.72
CD326+ enterocyte, pool1.CNhs13542.11848-124I3386.25
CD326+ enterocyte, pool2.CNhs13197.11849-124I4480.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7188.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8169.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E938.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E743.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F256.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E641.61
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F152.73
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.97
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E830.51
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.57
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A215.77
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A417.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A329.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1163.35
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2172.06
GP2+ M cell, pool1.CNhs13228.11845-124H9337.65
GP2+ M cell, pool2.CNhs13231.11846-124I1258.46
GP2+ M cell, pool3.CNhs13240.11847-124I2254.04
Ileum epithelium, pool1.CNhs13199.10252-104B9301.57
Ileum epithelium, pool2.CNhs13232.10253-104C1292.10
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8169.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F585.50
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F681.45
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F786.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8218.89
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1104.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3154.96
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9175.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2200.13
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4182.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D856.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D946.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B341.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B761.03
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C289.17
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B879.75
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C364.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C459.35
Mouse Astrocytes, donor3.CNhs12107.11633-122C456.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.63
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.84
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.74
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C158.91
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E158.45
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C526.30
Mouse Granule cells, donor1.CNhs12131.11713-123C324.88
Mouse Granule cells, donor2.CNhs12357.11731-123E330.15
Mouse Granule cells, donor3.CNhs12108.11636-122C725.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C646.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D149.80
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C729.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E720.77
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D229.84
Mouse Microglia, donor1.CNhs12629.11718-123C842.54
Mouse Microglia, donor2.CNhs12634.11736-123E849.56
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.43
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.06
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.88
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F172.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D552.79
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.42
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.42
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D345.15
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F345.97
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D740.71
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F431.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.27
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E433.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E529.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I635.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D658.93
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F651.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E152.56
Mouse Schwann, donor1.CNhs12507.11728-123D917.34
Mouse Schwann, donor2.CNhs12573.11746-123F914.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G360.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F730.98
Mouse hepatocyte, donor1.CNhs13078.11714-123C424.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C830.76
Mouse hepatocyte, donor6.CNhs13090.11822-124F433.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F626.43
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A751.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I794.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E364.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I856.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H180.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B678.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G168.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G270.18
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G383.92
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B671.82
accessory axillary lymph node, adult.CNhs10475.1063-29H927.97
adrenal gland, adult.CNhs10508.49-24D746.46
adrenal gland, embryo E14.CNhs11038.406-44C524.98
adrenal gland, embryo E16.CNhs11004.1254-43D634.71
adrenal gland, embryo E17.CNhs11043.1263-45I137.59
adrenal gland, embryo E18.CNhs11026.1262-18F534.36
adrenal gland, neonate N00.CNhs11191.1311-23C139.51
adrenal gland, neonate N25.CNhs11223.1377-27I343.61
amnion, adult pregnant day17.5.CNhs10488.583-22A851.42
aorta, adult.CNhs10498.46-23H136.58
bone (os femoris), adult.CNhs10483.56-12G278.73
bone (os femoris), neonate N02.CNhs11227.1985-43F5102.24
bone (os femoris), neonate N16.CNhs11225.1525-43A655.21
bone (os femoris), neonate N20.CNhs11195.1350-25C347.52
cecum, adult.CNhs10467.37-13H4216.21
cerebellum, adult.CNhs10494.15-8B255.92
cerebellum, neonate N30.CNhs11135.1395-42I285.04
colon, adult.CNhs10468.36-18H7272.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C718.45
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D415.88
corpora quadrigemina, adult.CNhs10501.16-22A432.35
corpus striatum, adult.CNhs10487.19-21D848.04
corpus striatum, neonate N00.CNhs11226.630-43F167.48
cortex, adult.CNhs10473.12-14D544.50
cortex, neonate N30.CNhs11107.1392-42F250.89
diencephalon, adult.CNhs10482.20-12F238.44
diencephalon, neonate N30.CNhs11201.1388-42B249.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B140.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A236.82
epididymis, adult.CNhs10490.58-23B211.12
eyeball, adult.CNhs10484.31-12G435.14
eyeball, embryo E12.CNhs11016.345-16C626.02
eyeball, embryo E14.CNhs10521.399-16E221.38
eyeball, embryo E15.CNhs10593.426-16C925.03
eyeball, embryo E17.CNhs11023.1261-18D434.21
eyeball, neonate N00.CNhs11207.633-15C641.50
eyeball, neonate N01.CNhs11140.1532-43E742.15
eyeball, neonate N02.CNhs11205.1551-44G838.79
eyeball, neonate N16.CNhs11188.777-19A256.91
forelimb, embryo E11.CNhs10596.335-25E223.07
forelimb, embryo E12.CNhs10600.359-14H249.92
forelimb, embryo E13.CNhs10589.384-1E260.18
forelimb, embryo E14.CNhs10577.413-26A849.76
forelimb, embryo E15.CNhs11007.437-20E756.72
forelimb, embryo E17.CNhs10598.1517-43C452.93
forelimb, embryo E18.CNhs11008.1520-43B549.18
gonad, embryo E13.CNhs11044.1564-45I623.09
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.96
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D227.02
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D537.23
heart, embryo E11.CNhs10586.331-24E932.73
heart, embryo E12.CNhs11015.353-12F534.24
heart, embryo E13.CNhs11013.376-3I933.67
heart, embryo E14.CNhs10597.403-26D434.80
heart, embryo E15.CNhs11017.431-16C828.92
heart, embryo E16.CNhs11021.457-17C634.86
heart, embryo E17.CNhs11025.479-18E530.93
heart, embryo E18.CNhs11030.1283-20G331.12
heart, neonate N00.CNhs11213.639-21E332.46
heart, neonate N03.CNhs11221.1349-25I239.33
heart, neonate N10.CNhs11118.749-24G136.61
heart, neonate N16.CNhs11209.782-15G136.48
heart, neonate N20.CNhs11127.821-26I640.20
heart, neonate N25.CNhs11196.1351-25D338.20
heart, neonate N30.CNhs11202.1390-42D241.07
hippocampus, adult.CNhs10478.13-16E859.51
hippocampus, neonate N00.CNhs11228.627-43G144.66
intestinal mucosa, adult.CNhs10506.860-29I3446.07
intestine, adult.CNhs10496.178-9A3273.44
intestine, embryo E12.CNhs11019.1251-16I537.97
intestine, embryo E13.CNhs11010.381-16D538.09
intestine, embryo E15.CNhs10602.976-16D863.53
intestine, embryo E16.CNhs10585.463-22H480.27
intestine, embryo E17.CNhs10582.482-18D375.39
intestine, embryo E18.CNhs10526.1289-20F794.35
intestine, neonate N00.CNhs11126.644-26D1272.38
intestine, neonate N01.CNhs11192.1322-23E9108.21
intestine, neonate N06.CNhs11102.688-20B8102.29
intestine, neonate N07.CNhs11095.720-20F2106.04
intestine, neonate N10.CNhs11098.755-23A5114.83
intestine, neonate N20.CNhs11187.827-18D1257.96
intestine, neonate N25.CNhs11121.1352-25E3275.14
intestine, neonate N30.CNhs11131.1384-42G1300.70
kidney, embryo E14.CNhs10606.411-4I925.98
kidney, embryo E15.CNhs10997.434-16F828.79
kidney, embryo E16.CNhs10584.464-22A546.21
kidney, embryo E17.CNhs11028.483-18I233.60
kidney, embryo E18.CNhs11001.1288-20C732.39
kidney, neonate N00.CNhs11214.646-21G735.84
kidney, neonate N10.CNhs11206.758-6D549.51
kidney, neonate N20.CNhs11113.832-19I142.66
kidney, neonate N25.CNhs11122.1353-25F345.22
kidney, neonate N30.CNhs11203.1385-42H138.25
liver, adult pregnant day01.CNhs10466.508-5B231.13
liver, embryo E12.CNhs10601.355-15F821.52
liver, embryo E13.CNhs10524.378-3H619.07
liver, embryo E14.CNhs10594.409-16E117.76
liver, embryo E15.CNhs10520.433-16D723.33
liver, embryo E16.CNhs10523.462-17F527.25
liver, embryo E17.CNhs10510.481-18A329.28
liver, embryo E18.CNhs10579.499-43G426.76
liver, neonate N00.CNhs11117.641-24F424.00
liver, neonate N03.CNhs11123.1345-25G237.34
liver, neonate N06.CNhs11101.684-20A833.07
liver, neonate N07.CNhs11103.716-20H242.05
liver, neonate N10.CNhs11115.751-24B942.44
liver, neonate N20.CNhs11220.823-25A343.70
liver, neonate N25.CNhs11198.1368-26H139.83
liver, neonate N30.CNhs11106.1382-42D145.35
lung, adult.CNhs10474.28-22B141.20
lung, embryo E12.CNhs10522.354-16G223.31
lung, embryo E14.CNhs10604.404-26F828.52
lung, embryo E15.CNhs11020.432-17C530.21
lung, embryo E16.CNhs10998.458-17B624.88
lung, embryo E17.CNhs10605.480-44A633.33
lung, embryo E18.CNhs10583.1287-20I633.33
lung, neonate N00.CNhs11224.640-42C645.47
lung, neonate N06.CNhs11212.683-20E543.19
lung, neonate N07.CNhs11111.715-19A342.96
lung, neonate N10.CNhs11219.750-23E640.66
lung, neonate N20.CNhs11109.822-18A443.26
lung, neonate N25.CNhs11119.1359-25C738.34
lung, neonate N30.CNhs11133.1394-42H241.22
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.42
mammary gland, adult lactating day02.CNhs10480.595-22B624.10
mammary gland, adult pregnant day19.CNhs10476.588-5H219.32
medulla oblongata, adult.CNhs10477.17-12C238.21
medulla oblongata, neonate N30.CNhs11200.1396-42A339.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C745.57
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C283.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.98
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.51
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.37
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.81
olfactory brain, adult.CNhs10489.18-22I955.27
ovary, adult.CNhs10507.91-2I732.36
ovary, embryo E18.CNhs11040.505-44H734.19
ovary, neonate N00.CNhs11217.1299-22I438.60
oviduct, adult pregnant day01.CNhs10500.988-6G638.11
pancreas, adult.CNhs10486.34-16E430.53
pancreas, embryo E14.CNhs11012.405-44F420.39
pancreas, embryo E15.CNhs11042.1556-45F222.98
pancreas, embryo E16.CNhs11003.460-26E526.59
pancreas, embryo E17.CNhs10599.1558-45G325.69
pancreas, embryo E18.CNhs10580.1535-43I722.14
pancreas, neonate N00.CNhs11105.645-26G939.54
pancreas, neonate N01.CNhs11138.1531-43D725.08
pancreas, neonate N02.CNhs11139.1539-43D834.22
pancreas, neonate N16.CNhs11136.787-43B630.97
pancreas, neonate N25.CNhs11094.1555-45E222.14
pancreas, neonate N30.CNhs11182.1548-44H527.85
pituitary gland, adult.CNhs10493.21-1G833.70
pituitary gland, embryo E12.CNhs11018.346-16E621.61
pituitary gland, embryo E13.CNhs11009.370-44C730.14
pituitary gland, embryo E14.CNhs11037.398-44A537.08
pituitary gland, embryo E15.CNhs10592.427-16B941.32
pituitary gland, embryo E16.CNhs11036.449-43F641.02
pituitary gland, embryo E17.CNhs11039.1265-44F537.68
pituitary gland, neonate N00.CNhs11190.1308-22E934.10
placenta, adult pregnant day10.CNhs10472.539-13I738.02
placenta, adult pregnant day17.CNhs10464.577-18G356.14
prostate, adult.CNhs10470.859-1F833.74
skin, adult.CNhs10492.30-1C336.11
skin, neonate N00.CNhs11124.650-25G444.73
skin, neonate N03.CNhs11215.662-22H337.45
skin, neonate N06.CNhs11097.693-20I528.53
skin, neonate N10.CNhs11108.762-6C437.10
small intestine, neonate N16.CNhs11114.790-21I1225.02
spinal cord, adult.CNhs10505.24-13C942.46
spleen, adult.CNhs10465.25-2G223.75
spleen, embryo E16.CNhs11035.461-43C123.94
spleen, embryo E18.CNhs11011.1271-21F224.45
spleen, neonate N10.CNhs11116.752-24D133.53
spleen, neonate N20.CNhs11112.824-19H122.96
spleen, neonate N25.CNhs11099.1354-25G319.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C621.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D320.04
stomach, adult.CNhs10503.33-1H6145.11
stomach, embryo E12.CNhs10588.356-43E336.22
stomach, embryo E15.CNhs10603.1252-16G843.92
stomach, embryo E16.CNhs11022.459-17D458.32
stomach, embryo E17.CNhs11006.1035-18D563.35
stomach, embryo E18.CNhs10999.1286-20C665.95
stomach, neonate N03.CNhs11193.1340-24B871.61
stomach, neonate N07.CNhs11210.718-18A986.70
stomach, neonate N25.CNhs11104.1355-25E4128.00
stomach, neonate N30.CNhs11134.1386-42I1221.12
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F526.02
testis, embryo E15.CNhs11034.443-27C524.32
testis, embryo E16.CNhs11033.470-26G525.47
testis, embryo E17.CNhs11029.486-18I517.18
testis, embryo E18.CNhs11027.503-18G521.96
testis, neonate N00.CNhs11189.1300-22B723.00
testis, neonate N07.CNhs11222.726-26I421.74
testis, neonate N10.CNhs11204.763-44D912.16
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E212.96
thymus, adult.CNhs10471.38-12B534.76
thymus, embryo E14.CNhs11041.402-44I420.88
thymus, embryo E15.CNhs11005.430-45I220.44
thymus, embryo E16.CNhs11002.456-26C518.06
thymus, embryo E17.CNhs10581.478-18C127.21
thymus, embryo E18.CNhs10595.1273-19G423.25
thymus, neonate N02.CNhs11181.1541-43F831.49
thymus, neonate N03.CNhs11137.2104-43C732.20
thymus, neonate N06.CNhs11197.681-26C434.03
thymus, neonate N07.CNhs11211.713-19D334.14
thymus, neonate N10.CNhs11194.748-24E438.31
thymus, neonate N20.CNhs11186.820-7A242.59
thymus, neonate N25.CNhs11125.1362-25G741.95
thymus, neonate N30.CNhs11132.1393-42G244.53
tongue, adult.CNhs10499.32-1B486.61
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F717.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G519.14
urinary bladder, adult.CNhs10481.879-12E4126.73
uterus, adult pregnant day19.CNhs10497.590-15F541.48
uterus, adult.CNhs10509.92-27E542.67
vagina, adult.CNhs10502.89-27D531.94
vesicular gland, adult.CNhs10491.51-27F823.57
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A143.49
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A242.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.24
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D741.07
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A536.26
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.27
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.69
whole body, embryo E11.CNhs11014.324-5I824.18
whole body, embryo E12.CNhs10587.857-27C927.93
whole body, embryo E13.CNhs10512.372-23H236.37
whole body, embryo E14.5.CNhs10578.420-27D251.78
whole body, embryo E14.CNhs10519.395-14B150.10
whole body, embryo E16.CNhs10514.453-14F260.85
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G557.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G559.54
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G565.79
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G562.92
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G562.61
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G563.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G560.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G563.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G564.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G561.92
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G560.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G560.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G574.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G552.26
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G557.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G563.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G557.22
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G563.66
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G556.18
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G561.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G555.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G558.40
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G559.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G557.80
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G561.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G563.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G551.56
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G563.68
whole body, embryo E17.5.CNhs10513.490-9F953.05
whole body, embryo E17.CNhs10517.475-3I549.96
whole body, embryo E18.CNhs10516.493-3B360.35
whole body, neonate N00.CNhs10525.657-19C263.60
whole body, neonate N01.CNhs10576.659-23C687.80
whole body, neonate N06.CNhs10515.692-21D169.05
whole body, neonate N10.CNhs10518.761-6B469.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
endo-epithelial cell1.33e-0715

Uber anatomy
Ontology termp-valuen
intestine1.24e-1631
gastrointestinal system4.17e-1447
mucosa3.85e-1015
intestinal mucosa4.62e-0913
wall of intestine4.62e-0913
gastrointestinal system mucosa4.62e-0913
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:59079415..59079443,-&oldid=4229104"