FFCP PHASE1:Mm9::chr19:58935503..58935512,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73442 | |EntrezGene=73442 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=Q8K0U4,Q3TNR3 | |UniProt=Q8K0U4,Q3TNR3 | ||
|association_with_transcript=-29bp_to_ENSMUST00000066285,NM_175199,uc008iaw.1,uc008iay.1_5end | |association_with_transcript=-29bp_to_ENSMUST00000066285,NM_175199,uc008iaw.1,uc008iay.1_5end | ||
|cluster_id=chr19:58935503..58935512,- | |||
|description=CAGE_peak_4_at_Hspa12a_5end | |description=CAGE_peak_4_at_Hspa12a_5end | ||
|id=chr19:58935503..58935512,- | |id=chr19:58935503..58935512,- | ||
|ontology_enrichment_celltype=CL:0000117!1.15e-15!23;CL:0000337!1.15e-15!23;CL:0000540!8.60e-13!33;CL:0000047!8.60e-13!33;CL:0000031!8.60e-13!33;CL:0000404!8.60e-13!33;CL:0000393!3.67e-12!39;CL:0000211!3.67e-12!39;CL:0000221!2.32e-11!44;CL:0000133!2.32e-11!44;CL:0000055!6.62e-11!50;CL:0002319!7.09e-11!43 | |ontology_enrichment_celltype=CL:0000117!1.15e-15!23;CL:0000337!1.15e-15!23;CL:0000540!8.60e-13!33;CL:0000047!8.60e-13!33;CL:0000031!8.60e-13!33;CL:0000404!8.60e-13!33;CL:0000393!3.67e-12!39;CL:0000211!3.67e-12!39;CL:0000221!2.32e-11!44;CL:0000133!2.32e-11!44;CL:0000055!6.62e-11!50;CL:0002319!7.09e-11!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.62e-30,23;CL:0000337,3.62e-30,23;CL:0000540,1.22e-18,33;CL:0000047,1.22e-18,33;CL:0000031,1.22e-18,33;CL:0000404,1.22e-18,33;CL:0000221,1.12e-17,44;CL:0000133,1.12e-17,44;CL:0000393,2.65e-17,39;CL:0000211,2.65e-17,39;CL:0002319,9.33e-17,43;CL:0002321,1.43e-09,70;CL:0002609,1.23e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.99e-24!102;UBERON:0000924!1.99e-24!102;UBERON:0006601!1.99e-24!102;UBERON:0002346!1.21e-23!71;UBERON:0003075!1.21e-23!71;UBERON:0007284!1.21e-23!71;UBERON:0000073!5.32e-22!75;UBERON:0001016!5.32e-22!75;UBERON:0001017!8.45e-21!73;UBERON:0005743!8.45e-21!73;UBERON:0001049!2.25e-20!52;UBERON:0005068!2.25e-20!52;UBERON:0006241!2.25e-20!52;UBERON:0007135!2.25e-20!52;UBERON:0000033!8.89e-19!63;UBERON:0002616!5.72e-18!49;UBERON:0002020!7.20e-18!34;UBERON:0000955!1.00e-17!50;UBERON:0006238!1.00e-17!50;UBERON:0003056!4.68e-16!49;UBERON:0003080!4.87e-15!40;UBERON:0002780!1.58e-14!39;UBERON:0001890!1.58e-14!39;UBERON:0006240!1.58e-14!39;UBERON:0002791!3.08e-14!29;UBERON:0003528!3.08e-14!29;UBERON:0001893!3.08e-14!29;UBERON:0000956!9.07e-10!21;UBERON:0001869!9.07e-10!21;UBERON:0000203!9.07e-10!21;UBERON:0000025!1.47e-07!114;UBERON:0002619!1.69e-07!17;UBERON:0004111!2.13e-07!122;UBERON:0007811!4.81e-07!86 | |ontology_enrichment_uberon=UBERON:0004121!1.99e-24!102;UBERON:0000924!1.99e-24!102;UBERON:0006601!1.99e-24!102;UBERON:0002346!1.21e-23!71;UBERON:0003075!1.21e-23!71;UBERON:0007284!1.21e-23!71;UBERON:0000073!5.32e-22!75;UBERON:0001016!5.32e-22!75;UBERON:0001017!8.45e-21!73;UBERON:0005743!8.45e-21!73;UBERON:0001049!2.25e-20!52;UBERON:0005068!2.25e-20!52;UBERON:0006241!2.25e-20!52;UBERON:0007135!2.25e-20!52;UBERON:0000033!8.89e-19!63;UBERON:0002616!5.72e-18!49;UBERON:0002020!7.20e-18!34;UBERON:0000955!1.00e-17!50;UBERON:0006238!1.00e-17!50;UBERON:0003056!4.68e-16!49;UBERON:0003080!4.87e-15!40;UBERON:0002780!1.58e-14!39;UBERON:0001890!1.58e-14!39;UBERON:0006240!1.58e-14!39;UBERON:0002791!3.08e-14!29;UBERON:0003528!3.08e-14!29;UBERON:0001893!3.08e-14!29;UBERON:0000956!9.07e-10!21;UBERON:0001869!9.07e-10!21;UBERON:0000203!9.07e-10!21;UBERON:0000025!1.47e-07!114;UBERON:0002619!1.69e-07!17;UBERON:0004111!2.13e-07!122;UBERON:0007811!4.81e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.38e-36,54;UBERON:0002020,2.04e-34,34;UBERON:0001049,1.76e-33,52;UBERON:0005068,1.76e-33,52;UBERON:0006241,1.76e-33,52;UBERON:0007135,1.76e-33,52;UBERON:0001016,3.85e-32,75;UBERON:0001017,6.10e-30,73;UBERON:0002346,1.01e-27,64;UBERON:0003075,1.01e-27,64;UBERON:0007284,1.01e-27,64;UBERON:0003528,4.95e-27,29;UBERON:0002791,4.95e-27,29;UBERON:0001893,4.95e-27,29;UBERON:0004121,4.97e-26,95;UBERON:0000924,4.97e-26,95;UBERON:0006601,4.97e-26,95;UBERON:0002616,1.97e-25,46;UBERON:0000955,1.16e-24,47;UBERON:0006238,1.16e-24,47;UBERON:0010371,3.67e-24,73;UBERON:0003080,2.19e-23,40;UBERON:0010314,2.86e-23,92;UBERON:0002780,2.13e-22,39;UBERON:0001890,2.13e-22,39;UBERON:0006240,2.13e-22,39;UBERON:0003056,4.88e-20,49;UBERON:0000956,5.71e-18,21;UBERON:0001869,5.71e-18,21;UBERON:0000203,5.71e-18,21;UBERON:0002619,2.16e-13,17;UBERON:0000025,1.16e-11,114;UBERON:0004111,6.96e-11,122;UBERON:0003076,2.25e-10,12;UBERON:0003057,2.25e-10,12;UBERON:0002420,3.26e-10,8;UBERON:0007245,3.26e-10,8;UBERON:0010009,3.26e-10,8;UBERON:0010011,3.26e-10,8;UBERON:0000454,3.26e-10,8;UBERON:0002021,6.15e-10,10;UBERON:0000411,6.15e-10,10;UBERON:0001950,6.15e-10,10;UBERON:0002240,9.69e-10,6;UBERON:0005174,9.69e-10,6;UBERON:0001137,9.69e-10,6;UBERON:0001948,1.25e-08,5;UBERON:0002315,1.25e-08,5 | |||
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| ||
|short_description=p4@Hspa12a | |short_description=p4@Hspa12a | ||
}} | }} |
Latest revision as of 01:55, 26 September 2015
Short description: | p4@Hspa12a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Hspa12a_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -29bp_to_ENSMUST00000066285, NM_175199, uc008iaw.1, uc008iay.1_5end |
EntrezGene: | Hspa12a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.62e-30 | 23 |
neuroblast (sensu Vertebrata) | 3.62e-30 | 23 |
neuron | 1.22e-18 | 33 |
neuronal stem cell | 1.22e-18 | 33 |
neuroblast | 1.22e-18 | 33 |
electrically signaling cell | 1.22e-18 | 33 |
ectodermal cell | 1.12e-17 | 44 |
neurectodermal cell | 1.12e-17 | 44 |
electrically responsive cell | 2.65e-17 | 39 |
electrically active cell | 2.65e-17 | 39 |
neural cell | 9.33e-17 | 43 |
embryonic cell | 1.43e-09 | 70 |
neuron of cerebral cortex | 1.23e-08 | 6 |