FFCP PHASE1:Mm9::chr9:103014321..103014336,+: Difference between revisions
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{{FFCP|EntrezGene=270192|HGNC=|MCL_coexpression_id=1|UniProt=P61294,Q0PD53,Q0PD54|association_with_transcript=-67bp_to_ENSMUST00000035155,NM_173781,uc009rgf.1_5end|description=CAGE_peak_6_at_Rab6b_5end|id=chr9:103014321..103014336,+|ontology_enrichment_celltype=CL:0000117!3.70e-09!23;CL:0000337!3.70e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.33e-18,23;CL:0000337,2.33e-18,23;CL:0000540,1.04e-11,33;CL:0000047,1.04e-11,33;CL:0000031,1.04e-11,33;CL:0000404,1.04e-11,33;CL:0000393,2.24e-09,39;CL:0000211,2.24e-09,39;CL:0002610,1.93e-08,3;CL:0002319,3.45e-08,43;CL:0002614,6.22e-08,3;CL:0000221,6.30e-08,44;CL:0000133,6.30e-08,44;CL:0002612,5.70e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!6.19e-20!63;UBERON:0001049!7.24e-20!52;UBERON:0005068!7.24e-20!52;UBERON:0006241!7.24e-20!52;UBERON:0007135!7.24e-20!52;UBERON:0002346!8.38e-20!71;UBERON:0003075!8.38e-20!71;UBERON:0007284!8.38e-20!71;UBERON:0004121!1.13e-19!102;UBERON:0000924!1.13e-19!102;UBERON:0006601!1.13e-19!102;UBERON:0000073!5.94e-19!75;UBERON:0001016!5.94e-19!75;UBERON:0000955!1.06e-18!50;UBERON:0006238!1.06e-18!50;UBERON:0001017!1.32e-18!73;UBERON:0005743!1.32e-18!73;UBERON:0002616!4.69e-18!49;UBERON:0003056!5.34e-16!49;UBERON:0003080!2.53e-14!40;UBERON:0002020!3.57e-14!34;UBERON:0002780!1.40e-13!39;UBERON:0001890!1.40e-13!39;UBERON:0006240!1.40e-13!39;UBERON:0007811!2.94e-11!86;UBERON:0002791!6.18e-11!29;UBERON:0003528!6.18e-11!29;UBERON:0001893!6.18e-11!29;UBERON:0000153!2.48e-09!94;UBERON:0002021!1.59e-08!10;UBERON:0000411!1.59e-08!10;UBERON:0001950!1.59e-08!10;UBERON:0002619!6.57e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.60e-39,54;UBERON:0001017,6.50e-35,73;UBERON:0001049,6.51e-35,52;UBERON:0005068,6.51e-35,52;UBERON:0006241,6.51e-35,52;UBERON:0007135,6.51e-35,52;UBERON:0001016,9.09e-34,75;UBERON:0002020,4.75e-29,34;UBERON:0002346,7.27e-29,64;UBERON:0003075,7.27e-29,64;UBERON:0007284,7.27e-29,64;UBERON:0004121,1.65e-26,95;UBERON:0000924,1.65e-26,95;UBERON:0006601,1.65e-26,95;UBERON:0000955,2.23e-26,47;UBERON:0006238,2.23e-26,47;UBERON:0002616,6.68e-25,46;UBERON:0010371,2.20e-24,73;UBERON:0002021,9.84e-21,10;UBERON:0000411,9.84e-21,10;UBERON:0001950,9.84e-21,10;UBERON:0003528,1.03e-20,29;UBERON:0002791,1.03e-20,29;UBERON:0001893,1.03e-20,29;UBERON:0003080,8.17e-20,40;UBERON:0002780,3.46e-18,39;UBERON:0001890,3.46e-18,39;UBERON:0006240,3.46e-18,39;UBERON:0010314,8.34e-18,92;UBERON:0003076,6.37e-17,12;UBERON:0003057,6.37e-17,12;UBERON:0003056,9.13e-17,49;UBERON:0002619,3.11e-16,17;UBERON:0000956,4.98e-15,21;UBERON:0001869,4.98e-15,21;UBERON:0000203,4.98e-15,21;UBERON:0002240,8.68e-13,6;UBERON:0005174,8.68e-13,6;UBERON:0001137,8.68e-13,6;UBERON:0000025,6.02e-12,114;UBERON:0004111,1.09e-10,122;UBERON:0001948,1.51e-10,5;UBERON:0002315,1.51e-10,5;UBERON:0002950,4.23e-10,4;UBERON:0001891,4.23e-10,4;UBERON:0009616,4.23e-10,4;UBERON:0010286,4.23e-10,4;UBERON:0004684,1.93e-08,3;UBERON:0002275,1.93e-08,3;UBERON:0011216,4.97e-08,194;UBERON:0002038,6.22e-08,3;UBERON:0009663,6.22e-08,3;UBERON:0009661,6.22e-08,3;UBERON:0000125,6.22e-08,3;UBERON:0002308,6.22e-08,3;UBERON:0002257,5.70e-07,3;UBERON:0002420,7.55e-07,8;UBERON:0007245,7.55e-07,8;UBERON:0010009,7.55e-07,8;UBERON:0010011,7.55e-07,8;UBERON:0000454,7.55e-07,8|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.342401459862411,0,0,0,0,0.157731082679119,0,0.42438965179803,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0,0,0,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0,0,0,4.85606673486466,1.98781686856452,0.122490799214954,0,1.83843757322004,7.70811166995721,13.9179198512855,13.0565553267807,0.659431438650969,1.9212405156506,0.52091337055676,11.725685958058,3.93933827022176,8.25110537994775,3.83017161115768,5.69486723196412,1.67759501242771,0.151452386666368,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0,0,0.741584903203122,0.289198713839823,0,0.161766849947409,0,0,0,4.09893115816166,3.56059401582874,0,0,0,0,6.14141621559773,3.20250421973039,0.628271760564322,5.04090528557602,6.13717097592793,5.81806524766768,3.89379031362618,0,0,0.758168275301024,0.420883711772948,0,0.229902104433473,0.180062129805349,0.30140963567143,0.204109497453984,0.512454881139399,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0.268412837520744,3.57492912559016,0.411618449517138,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.126473074248515,0.442830443938806,0.31399745568275,0.493588655687202,0,0.166845105716094,0,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=270192 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P61294,Q0PD53,Q0PD54 | |||
|association_with_transcript=-67bp_to_ENSMUST00000035155,NM_173781,uc009rgf.1_5end | |||
|cluster_id=chr9:103014321..103014336,+ | |||
|description=CAGE_peak_6_at_Rab6b_5end | |||
|id=chr9:103014321..103014336,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.70e-09!23;CL:0000337!3.70e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.33e-18,23;CL:0000337,2.33e-18,23;CL:0000540,1.04e-11,33;CL:0000047,1.04e-11,33;CL:0000031,1.04e-11,33;CL:0000404,1.04e-11,33;CL:0000393,2.24e-09,39;CL:0000211,2.24e-09,39;CL:0002610,1.93e-08,3;CL:0002319,3.45e-08,43;CL:0002614,6.22e-08,3;CL:0000221,6.30e-08,44;CL:0000133,6.30e-08,44;CL:0002612,5.70e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.19e-20!63;UBERON:0001049!7.24e-20!52;UBERON:0005068!7.24e-20!52;UBERON:0006241!7.24e-20!52;UBERON:0007135!7.24e-20!52;UBERON:0002346!8.38e-20!71;UBERON:0003075!8.38e-20!71;UBERON:0007284!8.38e-20!71;UBERON:0004121!1.13e-19!102;UBERON:0000924!1.13e-19!102;UBERON:0006601!1.13e-19!102;UBERON:0000073!5.94e-19!75;UBERON:0001016!5.94e-19!75;UBERON:0000955!1.06e-18!50;UBERON:0006238!1.06e-18!50;UBERON:0001017!1.32e-18!73;UBERON:0005743!1.32e-18!73;UBERON:0002616!4.69e-18!49;UBERON:0003056!5.34e-16!49;UBERON:0003080!2.53e-14!40;UBERON:0002020!3.57e-14!34;UBERON:0002780!1.40e-13!39;UBERON:0001890!1.40e-13!39;UBERON:0006240!1.40e-13!39;UBERON:0007811!2.94e-11!86;UBERON:0002791!6.18e-11!29;UBERON:0003528!6.18e-11!29;UBERON:0001893!6.18e-11!29;UBERON:0000153!2.48e-09!94;UBERON:0002021!1.59e-08!10;UBERON:0000411!1.59e-08!10;UBERON:0001950!1.59e-08!10;UBERON:0002619!6.57e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.60e-39,54;UBERON:0001017,6.50e-35,73;UBERON:0001049,6.51e-35,52;UBERON:0005068,6.51e-35,52;UBERON:0006241,6.51e-35,52;UBERON:0007135,6.51e-35,52;UBERON:0001016,9.09e-34,75;UBERON:0002020,4.75e-29,34;UBERON:0002346,7.27e-29,64;UBERON:0003075,7.27e-29,64;UBERON:0007284,7.27e-29,64;UBERON:0004121,1.65e-26,95;UBERON:0000924,1.65e-26,95;UBERON:0006601,1.65e-26,95;UBERON:0000955,2.23e-26,47;UBERON:0006238,2.23e-26,47;UBERON:0002616,6.68e-25,46;UBERON:0010371,2.20e-24,73;UBERON:0002021,9.84e-21,10;UBERON:0000411,9.84e-21,10;UBERON:0001950,9.84e-21,10;UBERON:0003528,1.03e-20,29;UBERON:0002791,1.03e-20,29;UBERON:0001893,1.03e-20,29;UBERON:0003080,8.17e-20,40;UBERON:0002780,3.46e-18,39;UBERON:0001890,3.46e-18,39;UBERON:0006240,3.46e-18,39;UBERON:0010314,8.34e-18,92;UBERON:0003076,6.37e-17,12;UBERON:0003057,6.37e-17,12;UBERON:0003056,9.13e-17,49;UBERON:0002619,3.11e-16,17;UBERON:0000956,4.98e-15,21;UBERON:0001869,4.98e-15,21;UBERON:0000203,4.98e-15,21;UBERON:0002240,8.68e-13,6;UBERON:0005174,8.68e-13,6;UBERON:0001137,8.68e-13,6;UBERON:0000025,6.02e-12,114;UBERON:0004111,1.09e-10,122;UBERON:0001948,1.51e-10,5;UBERON:0002315,1.51e-10,5;UBERON:0002950,4.23e-10,4;UBERON:0001891,4.23e-10,4;UBERON:0009616,4.23e-10,4;UBERON:0010286,4.23e-10,4;UBERON:0004684,1.93e-08,3;UBERON:0002275,1.93e-08,3;UBERON:0011216,4.97e-08,194;UBERON:0002038,6.22e-08,3;UBERON:0009663,6.22e-08,3;UBERON:0009661,6.22e-08,3;UBERON:0000125,6.22e-08,3;UBERON:0002308,6.22e-08,3;UBERON:0002257,5.70e-07,3;UBERON:0002420,7.55e-07,8;UBERON:0007245,7.55e-07,8;UBERON:0010009,7.55e-07,8;UBERON:0010011,7.55e-07,8;UBERON:0000454,7.55e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.342401459862411,0,0,0,0,0.157731082679119,0,0.42438965179803,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0,0,0,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0,0,0,4.85606673486466,1.98781686856452,0.122490799214954,0,1.83843757322004,7.70811166995721,13.9179198512855,13.0565553267807,0.659431438650969,1.9212405156506,0.52091337055676,11.725685958058,3.93933827022176,8.25110537994775,3.83017161115768,5.69486723196412,1.67759501242771,0.151452386666368,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0,0,0.741584903203122,0.289198713839823,0,0.161766849947409,0,0,0,4.09893115816166,3.56059401582874,0,0,0,0,6.14141621559773,3.20250421973039,0.628271760564322,5.04090528557602,6.13717097592793,5.81806524766768,3.89379031362618,0,0,0.758168275301024,0.420883711772948,0,0.229902104433473,0.180062129805349,0.30140963567143,0.204109497453984,0.512454881139399,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0.268412837520744,3.57492912559016,0.411618449517138,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.126473074248515,0.442830443938806,0.31399745568275,0.493588655687202,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0,0.275936746304732,8.0275294993896,5.74337264301796,0,0.252470927204373,0,0,0.430846795465598,0,0,0.283076530788832,0,0,0.790575555893047,2.57057053137446,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.177340233642274,0.535106452806212,0.987294123612726,0.608929898229199,0,0.42366414172764,0.220528398054962,0.32977250588296,0,0,0,0,0,9.27126510052548,0.170870880797853,0,0.185194527369712,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0.406638934253697,0,0,0.218362563746178,0.134864346384821,0,0,0,0.621339313086926,0,0.149516546043979,0,0.388902376688095,0.258319646955462,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.358855426437903,0.167884616364078,0.19318959403219,0,0.183151624267265,0,0,5.64751842617067,3.22227665555024,4.01026859407578,3.09335728218638,4.7955776383945,6.0431511791176,4.72515750162264,5.40385443869065,4.07828168085784,5.69536342927002,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0.64183841918363,0,0,0,0.280924522409647,0.128050304809739,0.34461281373368,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.735994600671987,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p6@Rab6b | |||
}} |
Latest revision as of 01:45, 26 September 2015
Short description: | p6@Rab6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rab6b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -67bp_to_ENSMUST00000035155, NM_173781, uc009rgf.1_5end |
EntrezGene: | Rab6b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.33e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.33e-18 | 23 |
neuron | 1.04e-11 | 33 |
neuronal stem cell | 1.04e-11 | 33 |
neuroblast | 1.04e-11 | 33 |
electrically signaling cell | 1.04e-11 | 33 |
electrically responsive cell | 2.24e-09 | 39 |
electrically active cell | 2.24e-09 | 39 |
raphe nuclei neuron | 1.93e-08 | 3 |
neural cell | 3.45e-08 | 43 |
neuron of the substantia nigra | 6.22e-08 | 3 |
ectodermal cell | 6.30e-08 | 44 |
neurectodermal cell | 6.30e-08 | 44 |
neuron of the ventral spinal cord | 5.70e-07 | 3 |