FFCP PHASE1:Mm9::chr5:45841460..45841469,-: Difference between revisions
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{{FFCP|EntrezGene=110391|HGNC=|UniProt=Q8BVI4|association_with_transcript=0bp_to_NM_024236,uc008xix.2_5end|description=CAGE_peak_3_at_Qdpr_5end|id=chr5:45841460..45841469,-|ontology_enrichment_celltype=CL:0000055!3.59e-14!50;CL:0000221!4.49e-14!44;CL:0000133!4.49e-14!44;CL:0002319!1.34e-13!43;CL:0000117!1.33e-12!23;CL:0000337!1.33e-12!23;CL:0000393!1.02e-10!39;CL:0000211!1.02e-10!39;CL:0000540!2.38e-10!33;CL:0000047!2.38e-10!33;CL:0000031!2.38e-10!33;CL:0000404!2.38e-10!33;CL:0002321!1.67e-07!70;CL:0000220!1.67e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,1.80e-18,23;CL:0000337,1.80e-18,23;CL:0000221,2.28e-18,44;CL:0000133,2.28e-18,44;CL:0002319,1.37e-17,43;CL:0000540,2.72e-13,33;CL:0000047,2.72e-13,33;CL:0000031,2.72e-13,33;CL:0000404,2.72e-13,33;CL:0000393,3.05e-12,39;CL:0000211,3.05e-12,39;CL:0002321,1.31e-10,70;CL:0002453,4.44e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.39e-21!75;UBERON:0001016!1.39e-21!75;UBERON:0001017!4.41e-21!73;UBERON:0005743!4.41e-21!73;UBERON:0001049!3.98e-18!52;UBERON:0005068!3.98e-18!52;UBERON:0006241!3.98e-18!52;UBERON:0007135!3.98e-18!52;UBERON:0000955!5.43e-17!50;UBERON:0006238!5.43e-17!50;UBERON:0002616!1.94e-16!49;UBERON:0004121!2.07e-15!102;UBERON:0000924!2.07e-15!102;UBERON:0006601!2.07e-15!102;UBERON:0000033!2.82e-15!63;UBERON:0002346!3.67e-15!71;UBERON:0003075!3.67e-15!71;UBERON:0007284!3.67e-15!71;UBERON:0002020!1.21e-13!34;UBERON:0003080!3.04e-12!40;UBERON:0002780!9.13e-12!39;UBERON:0001890!9.13e-12!39;UBERON:0006240!9.13e-12!39;UBERON:0000025!1.41e-11!114;UBERON:0003056!2.12e-11!49;UBERON:0002791!1.25e-10!29;UBERON:0003528!1.25e-10!29;UBERON:0001893!1.25e-10!29;UBERON:0004111!3.34e-10!122;UBERON:0003076!6.39e-07!12;UBERON:0003057!6.39e-07!12;UBERON:0000956!9.41e-07!21;UBERON:0001869!9.41e-07!21;UBERON:0000203!9.41e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.27e-27,73;UBERON:0001016,1.06e-25,75;UBERON:0000073,4.22e-25,54;UBERON:0001049,1.05e-22,52;UBERON:0005068,1.05e-22,52;UBERON:0006241,1.05e-22,52;UBERON:0007135,1.05e-22,52;UBERON:0004121,6.80e-18,95;UBERON:0000924,6.80e-18,95;UBERON:0006601,6.80e-18,95;UBERON:0002020,6.91e-18,34;UBERON:0000955,1.03e-17,47;UBERON:0006238,1.03e-17,47;UBERON:0010314,1.99e-17,92;UBERON:0002616,7.17e-17,46;UBERON:0002346,4.88e-16,64;UBERON:0003075,4.88e-16,64;UBERON:0007284,4.88e-16,64;UBERON:0010371,1.18e-14,73;UBERON:0003080,9.25e-14,40;UBERON:0002780,5.13e-13,39;UBERON:0001890,5.13e-13,39;UBERON:0006240,5.13e-13,39;UBERON:0003528,5.58e-13,29;UBERON:0002791,5.58e-13,29;UBERON:0001893,5.58e-13,29;UBERON:0003076,2.27e-10,12;UBERON:0003057,2.27e-10,12;UBERON:0000025,4.64e-10,114;UBERON:0004111,6.44e-10,122;UBERON:0003056,1.14e-09,49;UBERON:0002240,8.15e-08,6;UBERON:0005174,8.15e-08,6;UBERON:0001137,8.15e-08,6;UBERON:0000956,1.78e-07,21;UBERON:0001869,1.78e-07,21;UBERON:0000203,1.78e-07,21;UBERON:0002420,2.10e-07,8;UBERON:0007245,2.10e-07,8;UBERON:0010009,2.10e-07,8;UBERON:0010011,2.10e-07,8;UBERON:0000454,2.10e-07,8;UBERON:0001948,7.58e-07,5;UBERON:0002315,7.58e-07,5|phase1_expression=2.40223270657191,0,0,0.60492842261366,0.500895729946347,0,0,0.129123323441576,0,0,0.171217968225505,0,0,0.524522414513984,0,0,0,0.157731082679119,0.137114433605739,0.84877930359606,0.935476191661768,0.695036658406197,1.04479915655574,0.799962113967033,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0.504060259519861,0.221730510655305,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.612508068787107,0.418531630736908,0,0,0,0,0,0.503587271902309,0.709638518536602,0.550640256485045,3.12956537739216,3.48840250208714,2.63623419281366,2.13872888981712,1.81982348112971,0,0.167782606057736,0,0.336093799142464,0.771778308107841,1.14613375975503,1.54701627683233,3.03474691289397,0.528990979272033,1.90149421051854,2.37191172448392,0.889294796111139,1.3498495759221,2.96659908770092,1.4209602298922,1.49800055259202,3.07374644257244,1.65903379693564,1.21505344498522,0.841299845405528,3.71346279724945,3.75476519617743,0.61245399607477,2.20444583341944,3.67687514644008,4.40463523997555,4.59674417106676,4.45458946443106,1.58263545276233,3.01909223887952,2.08365348222704,3.62937898701795,5.6276261003168,5.80633341551878,2.65165726926301,3.55929201997757,1.67759501242771,0.908714319998209,0.982430281388212,0.289864488701678,0.860423876981386,0.679971333707751,0,0,0.448026887097336,0.561777680527007,0.340860645156116,1.29893002301434,0,1.54927761754349,0,0,0,1.08245520505607,0.760079596425296,1.01104889002957,0.45673551887624,0,0.29688427812965,1.90833859442749,1.52232739156071,0.461230994512117,0.150722640552623,0.352766121407114,1.50799909595611,0,0.433798070759735,0,1.13236794963186,0.220841518460394,0,0,0.585561594023094,1.04723353406728,0.255457055208591,0.359445373517761,0.599902730993408,0.762421362438388,1.64769703345305,1.83000241127451,0.753926112677186,1.39059456153821,2.04572365864264,2.49345653471472,0.973447578406546,0.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110391 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8BVI4 | |||
|association_with_transcript=0bp_to_NM_024236,uc008xix.2_5end | |||
|cluster_id=chr5:45841460..45841469,- | |||
|description=CAGE_peak_3_at_Qdpr_5end | |||
|id=chr5:45841460..45841469,- | |||
|ontology_enrichment_celltype=CL:0000055!3.59e-14!50;CL:0000221!4.49e-14!44;CL:0000133!4.49e-14!44;CL:0002319!1.34e-13!43;CL:0000117!1.33e-12!23;CL:0000337!1.33e-12!23;CL:0000393!1.02e-10!39;CL:0000211!1.02e-10!39;CL:0000540!2.38e-10!33;CL:0000047!2.38e-10!33;CL:0000031!2.38e-10!33;CL:0000404!2.38e-10!33;CL:0002321!1.67e-07!70;CL:0000220!1.67e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.80e-18,23;CL:0000337,1.80e-18,23;CL:0000221,2.28e-18,44;CL:0000133,2.28e-18,44;CL:0002319,1.37e-17,43;CL:0000540,2.72e-13,33;CL:0000047,2.72e-13,33;CL:0000031,2.72e-13,33;CL:0000404,2.72e-13,33;CL:0000393,3.05e-12,39;CL:0000211,3.05e-12,39;CL:0002321,1.31e-10,70;CL:0002453,4.44e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.39e-21!75;UBERON:0001016!1.39e-21!75;UBERON:0001017!4.41e-21!73;UBERON:0005743!4.41e-21!73;UBERON:0001049!3.98e-18!52;UBERON:0005068!3.98e-18!52;UBERON:0006241!3.98e-18!52;UBERON:0007135!3.98e-18!52;UBERON:0000955!5.43e-17!50;UBERON:0006238!5.43e-17!50;UBERON:0002616!1.94e-16!49;UBERON:0004121!2.07e-15!102;UBERON:0000924!2.07e-15!102;UBERON:0006601!2.07e-15!102;UBERON:0000033!2.82e-15!63;UBERON:0002346!3.67e-15!71;UBERON:0003075!3.67e-15!71;UBERON:0007284!3.67e-15!71;UBERON:0002020!1.21e-13!34;UBERON:0003080!3.04e-12!40;UBERON:0002780!9.13e-12!39;UBERON:0001890!9.13e-12!39;UBERON:0006240!9.13e-12!39;UBERON:0000025!1.41e-11!114;UBERON:0003056!2.12e-11!49;UBERON:0002791!1.25e-10!29;UBERON:0003528!1.25e-10!29;UBERON:0001893!1.25e-10!29;UBERON:0004111!3.34e-10!122;UBERON:0003076!6.39e-07!12;UBERON:0003057!6.39e-07!12;UBERON:0000956!9.41e-07!21;UBERON:0001869!9.41e-07!21;UBERON:0000203!9.41e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.27e-27,73;UBERON:0001016,1.06e-25,75;UBERON:0000073,4.22e-25,54;UBERON:0001049,1.05e-22,52;UBERON:0005068,1.05e-22,52;UBERON:0006241,1.05e-22,52;UBERON:0007135,1.05e-22,52;UBERON:0004121,6.80e-18,95;UBERON:0000924,6.80e-18,95;UBERON:0006601,6.80e-18,95;UBERON:0002020,6.91e-18,34;UBERON:0000955,1.03e-17,47;UBERON:0006238,1.03e-17,47;UBERON:0010314,1.99e-17,92;UBERON:0002616,7.17e-17,46;UBERON:0002346,4.88e-16,64;UBERON:0003075,4.88e-16,64;UBERON:0007284,4.88e-16,64;UBERON:0010371,1.18e-14,73;UBERON:0003080,9.25e-14,40;UBERON:0002780,5.13e-13,39;UBERON:0001890,5.13e-13,39;UBERON:0006240,5.13e-13,39;UBERON:0003528,5.58e-13,29;UBERON:0002791,5.58e-13,29;UBERON:0001893,5.58e-13,29;UBERON:0003076,2.27e-10,12;UBERON:0003057,2.27e-10,12;UBERON:0000025,4.64e-10,114;UBERON:0004111,6.44e-10,122;UBERON:0003056,1.14e-09,49;UBERON:0002240,8.15e-08,6;UBERON:0005174,8.15e-08,6;UBERON:0001137,8.15e-08,6;UBERON:0000956,1.78e-07,21;UBERON:0001869,1.78e-07,21;UBERON:0000203,1.78e-07,21;UBERON:0002420,2.10e-07,8;UBERON:0007245,2.10e-07,8;UBERON:0010009,2.10e-07,8;UBERON:0010011,2.10e-07,8;UBERON:0000454,2.10e-07,8;UBERON:0001948,7.58e-07,5;UBERON:0002315,7.58e-07,5 | |||
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| |||
|short_description=p3@Qdpr | |||
}} |
Latest revision as of 01:21, 26 September 2015
Short description: | p3@Qdpr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Qdpr_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_024236, uc008xix.2_5end |
EntrezGene: | Qdpr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.80e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.80e-18 | 23 |
ectodermal cell | 2.28e-18 | 44 |
neurectodermal cell | 2.28e-18 | 44 |
neural cell | 1.37e-17 | 43 |
neuron | 2.72e-13 | 33 |
neuronal stem cell | 2.72e-13 | 33 |
neuroblast | 2.72e-13 | 33 |
electrically signaling cell | 2.72e-13 | 33 |
electrically responsive cell | 3.05e-12 | 39 |
electrically active cell | 3.05e-12 | 39 |
embryonic cell | 1.31e-10 | 70 |
oligodendrocyte precursor cell | 4.44e-07 | 8 |