FFCP PHASE1:Mm9::chr14:52948124..52948148,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50524 | |EntrezGene=50524 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9QX96 | |UniProt=Q9QX96 | ||
|association_with_transcript=196bp_to_NM_015772,uc007tpf.1_5end | |association_with_transcript=196bp_to_NM_015772,uc007tpf.1_5end | ||
|cluster_id=chr14:52948124..52948148,- | |||
|description=CAGE_peak_7_at_Sall2_5end | |description=CAGE_peak_7_at_Sall2_5end | ||
|id=chr14:52948124..52948148,- | |id=chr14:52948124..52948148,- | ||
|ontology_enrichment_celltype=CL:0000221!3.61e-15!44;CL:0000133!3.61e-15!44;CL:0000117!5.31e-15!23;CL:0000337!5.31e-15!23;CL:0002319!2.65e-14!43;CL:0000055!1.16e-10!50;CL:0000540!3.77e-10!33;CL:0000047!3.77e-10!33;CL:0000031!3.77e-10!33;CL:0000404!3.77e-10!33;CL:0000393!2.45e-07!39;CL:0000211!2.45e-07!39;CL:0002453!2.61e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.70e-15,44;CL:0000133,4.70e-15,44;CL:0002319,1.52e-13,43;CL:0000117,9.06e-12,23;CL:0000337,9.06e-12,23;CL:0000540,5.48e-09,33;CL:0000047,5.48e-09,33;CL:0000031,5.48e-09,33;CL:0000404,5.48e-09,33;CL:0002321,7.79e-08,70;CL:0002613,9.58e-08,3;CL:0002453,1.47e-07,8;CL:0000120,2.11e-07,3;CL:0000393,3.44e-07,39;CL:0000211,3.44e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.60e-32!73;UBERON:0005743!1.60e-32!73;UBERON:0000073!5.07e-31!75;UBERON:0001016!5.07e-31!75;UBERON:0000033!3.51e-29!63;UBERON:0001049!1.74e-28!52;UBERON:0005068!1.74e-28!52;UBERON:0006241!1.74e-28!52;UBERON:0007135!1.74e-28!52;UBERON:0002346!3.98e-27!71;UBERON:0003075!3.98e-27!71;UBERON:0007284!3.98e-27!71;UBERON:0004121!4.50e-27!102;UBERON:0000924!4.50e-27!102;UBERON:0006601!4.50e-27!102;UBERON:0000955!2.30e-26!50;UBERON:0006238!2.30e-26!50;UBERON:0002616!5.40e-26!49;UBERON:0003056!5.98e-24!49;UBERON:0003080!9.45e-22!40;UBERON:0002780!5.28e-21!39;UBERON:0001890!5.28e-21!39;UBERON:0006240!5.28e-21!39;UBERON:0000153!6.84e-19!94;UBERON:0007811!5.05e-18!86;UBERON:0002020!5.73e-16!34;UBERON:0002791!2.48e-12!29;UBERON:0003528!2.48e-12!29;UBERON:0001893!2.48e-12!29;UBERON:0001894!2.15e-10!10;UBERON:0006222!2.15e-10!10;UBERON:0000007!5.47e-09!8;UBERON:0003296!5.47e-09!8;UBERON:0010133!5.47e-09!8;UBERON:0000956!1.64e-08!21;UBERON:0001869!1.64e-08!21;UBERON:0000203!1.64e-08!21;UBERON:0003076!3.57e-07!12;UBERON:0003057!3.57e-07!12;UBERON:0002619!6.43e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.10e-25,73;UBERON:0001016,5.00e-24,75;UBERON:0001894,1.53e-23,10;UBERON:0006222,1.53e-23,10;UBERON:0004121,2.26e-22,95;UBERON:0000924,2.26e-22,95;UBERON:0006601,2.26e-22,95;UBERON:0000007,4.83e-20,8;UBERON:0003296,4.83e-20,8;UBERON:0010133,4.83e-20,8;UBERON:0000073,1.27e-19,54;UBERON:0001049,4.39e-17,52;UBERON:0005068,4.39e-17,52;UBERON:0006241,4.39e-17,52;UBERON:0007135,4.39e-17,52;UBERON:0003080,4.48e-17,40;UBERON:0003056,1.35e-16,49;UBERON:0010371,1.95e-16,73;UBERON:0002346,5.61e-16,64;UBERON:0003075,5.61e-16,64;UBERON:0007284,5.61e-16,64;UBERON:0002780,9.05e-16,39;UBERON:0001890,9.05e-16,39;UBERON:0006240,9.05e-16,39;UBERON:0002616,2.94e-14,46;UBERON:0000955,7.38e-14,47;UBERON:0006238,7.38e-14,47;UBERON:0010314,8.70e-12,92;UBERON:0011216,3.88e-07,194 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,1.09843091367236,1.94429899074283,0.699932108126813,5.75010257459886,0,0,0,0,0,0,1.41621522601718,2.11596391708813,1.26766280701236,0,0,0,0,0,2.69640099466564,14.2160772968975,0.414758449233911,0.270011876663381,0.841299845405528,0.856952953211411,2.42955395046775,0.244981598429908,0.958454710182364,0.919218786610021,1.10115880999389,1.0214987046815,0.921639199537461,1.18697658957174,3.56801810049398,2.08365348222704,0.837548997004143,0,1.06958773443767,1.47314292736834,2.56269025438385,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,9.29566570526091,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.04853447583376,0.915001205637253,0.376963056338593,0.347648640384553,0.511430914660661,1.0389402227978,1.29793010454206,0,0,0,0.420883711772948,2.86264974517948,1.83921683546778,0.720248519221397,0.452114453507145,0.204109497453984,0,0,0.258703370739016,0.215567992932842,0.378212160335639,0.351902248327898,0.43839146485515,0.556094498451196,0,0,0,0,0,0,0.621377317606506,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0,1.05144974282064,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,2.04263763452273,6.12207719706455,8.79639049722731,7.07312215604255,4.96552654198366,3.74574516964348,3.62007845324666,2.74018454203139,0,0,0,0,0,0,0,0,0,0.741701208042039,0.341741761595705,1.65109494370578,2.03713980106683,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0.299033092087958,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.68741272937475,0.685082519770642,1.5107877947794,0,0,0.453142408984205,0.51776031175182,1.66059756134683,0,1.02440163452481,0.486213434136588,0.419226325255965,0.551530525350042,0.222246727801615,0,0,0,0,0,0.37456602987953,0.128050304809739,0.287177344778066,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.619747364743864,0,0.749431733813838,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,1.09843091367236,1.94429899074283,0.699932108126813,5.75010257459886,0,0,0,0,0,0,1.41621522601718,2.11596391708813,1.26766280701236,0,0,0,0,0,2.69640099466564,14.2160772968975,0.414758449233911,0.270011876663381,0.841299845405528,0.856952953211411,2.42955395046775,0.244981598429908,0.958454710182364,0.919218786610021,1.10115880999389,1.0214987046815,0.921639199537461,1.18697658957174,3.56801810049398,2.08365348222704,0.837548997004143,0,1.06958773443767,1.47314292736834,2.56269025438385,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,9.29566570526091,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.04853447583376,0.915001205637253,0.376963056338593,0.347648640384553,0.511430914660661,1.0389402227978,1.29793010454206,0,0,0,0.420883711772948,2.86264974517948,1.83921683546778,0.720248519221397,0.452114453507145,0.204109497453984,0,0,0.258703370739016,0.215567992932842,0.378212160335639,0.351902248327898,0.43839146485515,0.556094498451196,0,0,0,0,0,0,0.621377317606506,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0,1.05144974282064,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,2.04263763452273,6.12207719706455,8.79639049722731,7.07312215604255,4.96552654198366,3.74574516964348,3.62007845324666,2.74018454203139,0,0,0,0,0,0,0,0,0,0.741701208042039,0.341741761595705,1.65109494370578,2.03713980106683,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0.299033092087958,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.68741272937475,0.685082519770642,1.5107877947794,0,0,0.453142408984205,0.51776031175182,1.66059756134683,0,1.02440163452481,0.486213434136588,0.419226325255965,0.551530525350042,0.222246727801615,0,0,0,0,0,0.37456602987953,0.128050304809739,0.287177344778066,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.619747364743864,0,0.749431733813838,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p7@Sall2 | |short_description=p7@Sall2 | ||
}} | }} |
Latest revision as of 01:20, 26 September 2015
Short description: | p7@Sall2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Sall2_5end |
Coexpression cluster: | NA |
Association with transcript: | 196bp_to_NM_015772, uc007tpf.1_5end |
EntrezGene: | Sall2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.70e-15 | 44 |
neurectodermal cell | 4.70e-15 | 44 |
neural cell | 1.52e-13 | 43 |
CNS neuron (sensu Vertebrata) | 9.06e-12 | 23 |
neuroblast (sensu Vertebrata) | 9.06e-12 | 23 |
neuron | 5.48e-09 | 33 |
neuronal stem cell | 5.48e-09 | 33 |
neuroblast | 5.48e-09 | 33 |
electrically signaling cell | 5.48e-09 | 33 |
embryonic cell | 7.79e-08 | 70 |
striatum neuron | 9.58e-08 | 3 |
oligodendrocyte precursor cell | 1.47e-07 | 8 |
granule cell | 2.11e-07 | 3 |
electrically responsive cell | 3.44e-07 | 39 |
electrically active cell | 3.44e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.10e-25 | 73 |
nervous system | 5.00e-24 | 75 |
diencephalon | 1.53e-23 | 10 |
future diencephalon | 1.53e-23 | 10 |
ectoderm-derived structure | 2.26e-22 | 95 |
ectoderm | 2.26e-22 | 95 |
presumptive ectoderm | 2.26e-22 | 95 |
pituitary gland | 4.83e-20 | 8 |
gland of diencephalon | 4.83e-20 | 8 |
neuroendocrine gland | 4.83e-20 | 8 |
regional part of nervous system | 1.27e-19 | 54 |
neural tube | 4.39e-17 | 52 |
neural rod | 4.39e-17 | 52 |
future spinal cord | 4.39e-17 | 52 |
neural keel | 4.39e-17 | 52 |
anterior neural tube | 4.48e-17 | 40 |
pre-chordal neural plate | 1.35e-16 | 49 |
ecto-epithelium | 1.95e-16 | 73 |
neurectoderm | 5.61e-16 | 64 |
neural plate | 5.61e-16 | 64 |
presumptive neural plate | 5.61e-16 | 64 |
regional part of forebrain | 9.05e-16 | 39 |
forebrain | 9.05e-16 | 39 |
future forebrain | 9.05e-16 | 39 |
regional part of brain | 2.94e-14 | 46 |
brain | 7.38e-14 | 47 |
future brain | 7.38e-14 | 47 |
structure with developmental contribution from neural crest | 8.70e-12 | 92 |
organ system subdivision | 3.88e-07 | 194 |