FFCP PHASE1:Mm9::chr14:51661536..51661554,-: Difference between revisions
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{{FFCP|EntrezGene=328401|HGNC=|MCL_coexpression_id=9|UniProt=P60154,Q8C5B0,Q5QJV3|association_with_transcript=0bp_to_ENSMUST00000064214,ENSMUST00000164478,NM_183032,uc007tmh.1_5end|description=CAGE_peak_1_at_Rnase9_5end|id=chr14:51661536..51661554,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001301!5.28e-16!3;UBERON:0006555!5.28e-16!3;UBERON:0005103!5.28e-16!3;UBERON:0000083!5.28e-16!3;UBERON:0009201!5.28e-16!3;UBERON:0004819!5.28e-16!3;UBERON:0006553!5.28e-16!3;UBERON:0003074!5.28e-16!3;UBERON:0003060!5.28e-16!3;UBERON:0002113!6.02e-13!14;UBERON:0003918!6.02e-13!14;UBERON:0005095!6.02e-13!14;UBERON:0007687!6.02e-13!14;UBERON:0000080!2.95e-12!4;UBERON:0005904!2.95e-12!4;UBERON:0006947!2.95e-12!4;UBERON:0002120!2.95e-12!4;UBERON:0004054!2.95e-12!4;UBERON:0004875!2.95e-12!4;UBERON:0004876!2.95e-12!4;UBERON:0005721!2.95e-12!4;UBERON:0005754!2.95e-12!4;UBERON:0007297!2.95e-12!4;UBERON:0006554!2.20e-11!16;UBERON:0001008!9.70e-11!17;UBERON:0000489!9.07e-09!21;UBERON:0000058!1.75e-08!6;UBERON:0003135!2.52e-07!15;UBERON:0003101!6.65e-07!16;UBERON:0000079!6.65e-07!16;UBERON:0001343!6.68e-07!2;UBERON:0004910!6.68e-07!2;UBERON:0004909!6.68e-07!2;UBERON:0005154!6.68e-07!2;UBERON:0005295!6.68e-07!2;UBERON:0005297!6.68e-07!2;UBERON:0005294!6.68e-07!2;UBERON:0010141!6.68e-07!2;UBERON:0005891!6.68e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.01e-20,3;UBERON:0006555,1.01e-20,3;UBERON:0005103,1.01e-20,3;UBERON:0000083,1.01e-20,3;UBERON:0009201,1.01e-20,3;UBERON:0004819,1.01e-20,3;UBERON:0006553,1.01e-20,3;UBERON:0003074,1.01e-20,3;UBERON:0003060,1.01e-20,3;UBERON:0000080,8.06e-16,4;UBERON:0005904,8.06e-16,4;UBERON:0006947,8.06e-16,4;UBERON:0002120,8.06e-16,4;UBERON:0004054,8.06e-16,4;UBERON:0004875,8.06e-16,4;UBERON:0004876,8.06e-16,4;UBERON:0005721,8.06e-16,4;UBERON:0005754,8.06e-16,4;UBERON:0007297,8.06e-16,4;UBERON:0003135,1.62e-09,15;UBERON:0000058,1.78e-09,7;UBERON:0003101,5.75e-09,16;UBERON:0000079,5.75e-09,16;UBERON:0001343,1.09e-08,2;UBERON:0004910,1.09e-08,2;UBERON:0004909,1.09e-08,2;UBERON:0005154,1.09e-08,2;UBERON:0005295,1.09e-08,2;UBERON:0005297,1.09e-08,2;UBERON:0005294,1.09e-08,2;UBERON:0010141,1.09e-08,2;UBERON:0005891,1.09e-08,2;UBERON:0004175,1.40e-07,9;UBERON:0003887,6.53e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2637879006672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4995533917259,0,0,0,0,0,0,0,0,0,0,38.9367029841994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,215.348466126071,4604.60865866155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3528701814781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Rnase9}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=328401 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=P60154,Q8C5B0,Q5QJV3 | |||
|association_with_transcript=0bp_to_ENSMUST00000064214,ENSMUST00000164478,NM_183032,uc007tmh.1_5end | |||
|cluster_id=chr14:51661536..51661554,- | |||
|description=CAGE_peak_1_at_Rnase9_5end | |||
|id=chr14:51661536..51661554,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!5.28e-16!3;UBERON:0006555!5.28e-16!3;UBERON:0005103!5.28e-16!3;UBERON:0000083!5.28e-16!3;UBERON:0009201!5.28e-16!3;UBERON:0004819!5.28e-16!3;UBERON:0006553!5.28e-16!3;UBERON:0003074!5.28e-16!3;UBERON:0003060!5.28e-16!3;UBERON:0002113!6.02e-13!14;UBERON:0003918!6.02e-13!14;UBERON:0005095!6.02e-13!14;UBERON:0007687!6.02e-13!14;UBERON:0000080!2.95e-12!4;UBERON:0005904!2.95e-12!4;UBERON:0006947!2.95e-12!4;UBERON:0002120!2.95e-12!4;UBERON:0004054!2.95e-12!4;UBERON:0004875!2.95e-12!4;UBERON:0004876!2.95e-12!4;UBERON:0005721!2.95e-12!4;UBERON:0005754!2.95e-12!4;UBERON:0007297!2.95e-12!4;UBERON:0006554!2.20e-11!16;UBERON:0001008!9.70e-11!17;UBERON:0000489!9.07e-09!21;UBERON:0000058!1.75e-08!6;UBERON:0003135!2.52e-07!15;UBERON:0003101!6.65e-07!16;UBERON:0000079!6.65e-07!16;UBERON:0001343!6.68e-07!2;UBERON:0004910!6.68e-07!2;UBERON:0004909!6.68e-07!2;UBERON:0005154!6.68e-07!2;UBERON:0005295!6.68e-07!2;UBERON:0005297!6.68e-07!2;UBERON:0005294!6.68e-07!2;UBERON:0010141!6.68e-07!2;UBERON:0005891!6.68e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.01e-20,3;UBERON:0006555,1.01e-20,3;UBERON:0005103,1.01e-20,3;UBERON:0000083,1.01e-20,3;UBERON:0009201,1.01e-20,3;UBERON:0004819,1.01e-20,3;UBERON:0006553,1.01e-20,3;UBERON:0003074,1.01e-20,3;UBERON:0003060,1.01e-20,3;UBERON:0000080,8.06e-16,4;UBERON:0005904,8.06e-16,4;UBERON:0006947,8.06e-16,4;UBERON:0002120,8.06e-16,4;UBERON:0004054,8.06e-16,4;UBERON:0004875,8.06e-16,4;UBERON:0004876,8.06e-16,4;UBERON:0005721,8.06e-16,4;UBERON:0005754,8.06e-16,4;UBERON:0007297,8.06e-16,4;UBERON:0003135,1.62e-09,15;UBERON:0000058,1.78e-09,7;UBERON:0003101,5.75e-09,16;UBERON:0000079,5.75e-09,16;UBERON:0001343,1.09e-08,2;UBERON:0004910,1.09e-08,2;UBERON:0004909,1.09e-08,2;UBERON:0005154,1.09e-08,2;UBERON:0005295,1.09e-08,2;UBERON:0005297,1.09e-08,2;UBERON:0005294,1.09e-08,2;UBERON:0010141,1.09e-08,2;UBERON:0005891,1.09e-08,2;UBERON:0004175,1.40e-07,9;UBERON:0003887,6.53e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2637879006672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4995533917259,0,0,0,0,0,0,0,0,0,0,38.9367029841994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,215.348466126071,4604.60865866155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3528701814781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Rnase9 | |||
}} |
Latest revision as of 00:38, 26 September 2015
Short description: | p1@Rnase9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rnase9_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 0bp_to_ENSMUST00000064214, ENSMUST00000164478, NM_183032, uc007tmh.1_5end |
EntrezGene: | Rnase9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 1.01e-20 | 3 |
excretory tube | 1.01e-20 | 3 |
mesonephric epithelium | 1.01e-20 | 3 |
mesonephric tubule | 1.01e-20 | 3 |
nephric duct | 1.01e-20 | 3 |
kidney epithelium | 1.01e-20 | 3 |
renal duct | 1.01e-20 | 3 |
mesonephric duct | 1.01e-20 | 3 |
pronephric duct | 1.01e-20 | 3 |
mesonephros | 8.06e-16 | 4 |
duct of male reproductive system | 8.06e-16 | 4 |
male genital duct | 8.06e-16 | 4 |
pronephros | 8.06e-16 | 4 |
internal male genitalia | 8.06e-16 | 4 |
nephrogenic cord | 8.06e-16 | 4 |
urogenital ridge | 8.06e-16 | 4 |
pronephric mesoderm | 8.06e-16 | 4 |
rostral part of nephrogenic cord | 8.06e-16 | 4 |
presumptive pronephric mesoderm | 8.06e-16 | 4 |
male reproductive organ | 1.62e-09 | 15 |
duct | 1.78e-09 | 7 |
male organism | 5.75e-09 | 16 |
male reproductive system | 5.75e-09 | 16 |
seminiferous tubule of testis | 1.09e-08 | 2 |
epithelium of male gonad | 1.09e-08 | 2 |
epithelium of gonad | 1.09e-08 | 2 |
epithelial cord | 1.09e-08 | 2 |
sex cord | 1.09e-08 | 2 |
testis sex cord | 1.09e-08 | 2 |
genital ridge | 1.09e-08 | 2 |
primitive sex cord of indifferent gonad | 1.09e-08 | 2 |
coelomic epithelium | 1.09e-08 | 2 |
internal genitalia | 1.40e-07 | 9 |
intraembryonic coelom | 6.53e-07 | 10 |