FFCP PHASE1:Mm9::chr2:156955777..156955799,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56045 | |EntrezGene=56045 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000152866_5end | |association_with_transcript=0bp_to_ENSMUST00000152866_5end | ||
|cluster_id=chr2:156955777..156955799,- | |||
|description=CAGE_peak_5_at_Samhd1_5end | |description=CAGE_peak_5_at_Samhd1_5end | ||
|id=chr2:156955777..156955799,- | |id=chr2:156955777..156955799,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,7.60e-14,19;CL:0000763,5.87e-10,16;CL:0000473,4.34e-09,7;CL:0000557,8.27e-09,7;CL:0000988,2.57e-08,32;CL:0002032,2.57e-08,32;CL:0000037,2.57e-08,32;CL:0000837,2.57e-08,32;CL:0002320,5.02e-08,46;CL:0000134,5.02e-08,46;CL:0002092,2.67e-07,3;CL:0002540,2.67e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.12e-10!48;UBERON:0001474!7.14e-10!22;UBERON:0004765!7.14e-10!22;UBERON:0001434!7.14e-10!22;UBERON:0002371!1.06e-09!16;UBERON:0002405!5.06e-09!70;UBERON:0002390!1.03e-08!45;UBERON:0003061!1.03e-08!45;UBERON:0002204!4.22e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.23e-19,22;UBERON:0004765,2.23e-19,22;UBERON:0001434,2.23e-19,22;UBERON:0002371,4.33e-18,16;UBERON:0002204,1.53e-13,32;UBERON:0002193,2.90e-11,48;UBERON:0002405,2.90e-11,48;UBERON:0002390,2.76e-08,45;UBERON:0003061,2.76e-08,45;UBERON:0002384,5.02e-08,46 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,0,0,1.6787927191189,2.33612640595526,0.129123323441576,0.140788722151667,0,0.171217968225505,0,0.171200729931206,0.174840804837995,0.666219523631325,1.41732687172878,0,4.41647031501533,6.03303507865251,4.66828616977833,0.0850432901510698,0,0,2.3998863419011,2.2940928106717,1.14846392823004,2.58457197695445,2.15471232685889,0.190023419456374,0.252030129759931,1.10865255327652,0,0,0,0,0,0.204169356262369,1.25559489221072,0.7813353445238,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,4.02678254538567,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,6.29929802096979,5.93319817540185,4.9733608046227,1.19840044207362,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,6.21450920753212,1.03909497345377,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,4.42305275974937,0.323533699894818,2.87093973998512,2.42437626567611,0,0,0,0.255457055208591,1.43778149407104,1.79970819298022,2.28726408731516,0,0,0,0,0.255715457330331,0,0.162241263067758,0.305518091550949,1.8661045591514,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0.384341160854549,0.0937017245597288,0,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0.61734640922383,0,1.40442637462647,2.05878325691772,1.13665399758237,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.465067889500816,0,0,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0,0,0.205809224758569,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0.760902504450237,0.474529061544512,0.329397909448022,1.25667604400135,0.795825888164603,1.55971269695296,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0.210407459670956,0.189709611372772,0.147610147979602,0,0,0,0,0.196558995113203,0,0.202860121388503,0.964708639009667,1.52775511068852,0.575392274901621,1.29708181420028,0.274561413188081,2.87536413054709,0,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,0.369506380333209,0,0.162964976442026,0,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0.664394068946325,0.956728611944923,0.163863314715738,1.20879487306127,1.3018415272336,6.03165135757089,4.35124547054968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,1.15479086080775,0,0.485561272309963,0.604647113929502,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0.354680467284547,0,0.329098041204242,0,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0.291480836629851,0,1.87957968877638,0.412773735926445,0.555583582109135,1.31857919903284,3.14396723758358,2.28778173206523,5.60928818979723,5.318155188299,3.86959926652387,0,0,0,0,0,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.675824501963113,0.234714477291508,0,0,0,0,0.632022241256357,0.202725215290164,0.513554785824136,0.25984164595559,0,0.198681354781265,0.240390899039938,0.295379054349154,0.302899349844443,0.304827226619999,0,0.194915761479505,0.192423683280659,0.701261413089414,0,0,0,0,0.19318959403219,0.93841237725591,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,1.26348605881899,0,0.377252682772152,0.187283014939765,0.192075457214608,0.34461281373368,0,0.463537303779422,0.38581844092741,0.412085900803307,0.441596760403192,0,0.354951612318675,0,0.145346416632329,0.376437521661322,0,0,0.789209134313529,0,0.561142271657738,0,0.29551344712669,1.22769312950907,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.214871054048298,0.765153328275374,0.441182838239031,0.927471342481686 | |phase1_expression=0,1.04692622291808,0.454999239389536,0,0,1.6787927191189,2.33612640595526,0.129123323441576,0.140788722151667,0,0.171217968225505,0,0.171200729931206,0.174840804837995,0.666219523631325,1.41732687172878,0,4.41647031501533,6.03303507865251,4.66828616977833,0.0850432901510698,0,0,2.3998863419011,2.2940928106717,1.14846392823004,2.58457197695445,2.15471232685889,0.190023419456374,0.252030129759931,1.10865255327652,0,0,0,0,0,0.204169356262369,1.25559489221072,0.7813353445238,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,4.02678254538567,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,6.29929802096979,5.93319817540185,4.9733608046227,1.19840044207362,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,6.21450920753212,1.03909497345377,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,4.42305275974937,0.323533699894818,2.87093973998512,2.42437626567611,0,0,0,0.255457055208591,1.43778149407104,1.79970819298022,2.28726408731516,0,0,0,0,0.255715457330331,0,0.162241263067758,0.305518091550949,1.8661045591514,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0.384341160854549,0.0937017245597288,0,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0.61734640922383,0,1.40442637462647,2.05878325691772,1.13665399758237,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.465067889500816,0,0,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0,0,0.205809224758569,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0.760902504450237,0.474529061544512,0.329397909448022,1.25667604400135,0.795825888164603,1.55971269695296,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0.210407459670956,0.189709611372772,0.147610147979602,0,0,0,0,0.196558995113203,0,0.202860121388503,0.964708639009667,1.52775511068852,0.575392274901621,1.29708181420028,0.274561413188081,2.87536413054709,0,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,0.369506380333209,0,0.162964976442026,0,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0.664394068946325,0.956728611944923,0.163863314715738,1.20879487306127,1.3018415272336,6.03165135757089,4.35124547054968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,1.15479086080775,0,0.485561272309963,0.604647113929502,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0.354680467284547,0,0.329098041204242,0,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0.291480836629851,0,1.87957968877638,0.412773735926445,0.555583582109135,1.31857919903284,3.14396723758358,2.28778173206523,5.60928818979723,5.318155188299,3.86959926652387,0,0,0,0,0,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.675824501963113,0.234714477291508,0,0,0,0,0.632022241256357,0.202725215290164,0.513554785824136,0.25984164595559,0,0.198681354781265,0.240390899039938,0.295379054349154,0.302899349844443,0.304827226619999,0,0.194915761479505,0.192423683280659,0.701261413089414,0,0,0,0,0.19318959403219,0.93841237725591,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,1.26348605881899,0,0.377252682772152,0.187283014939765,0.192075457214608,0.34461281373368,0,0.463537303779422,0.38581844092741,0.412085900803307,0.441596760403192,0,0.354951612318675,0,0.145346416632329,0.376437521661322,0,0,0.789209134313529,0,0.561142271657738,0,0.29551344712669,1.22769312950907,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.214871054048298,0.765153328275374,0.441182838239031,0.927471342481686 | ||
|short_description=p5@Samhd1 | |short_description=p5@Samhd1 | ||
}} | }} |
Latest revision as of 00:32, 26 September 2015
Short description: | p5@Samhd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Samhd1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000152866_5end |
EntrezGene: | Samhd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 7.60e-14 | 19 |
myeloid cell | 5.87e-10 | 16 |
defensive cell | 4.34e-09 | 7 |
granulocyte monocyte progenitor cell | 8.27e-09 | 7 |
hematopoietic cell | 2.57e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.57e-08 | 32 |
hematopoietic stem cell | 2.57e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.57e-08 | 32 |
connective tissue cell | 5.02e-08 | 46 |
mesenchymal cell | 5.02e-08 | 46 |
bone marrow cell | 2.67e-07 | 3 |
mesenchymal stem cell of the bone marrow | 2.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.23e-19 | 22 |
skeletal element | 2.23e-19 | 22 |
skeletal system | 2.23e-19 | 22 |
bone marrow | 4.33e-18 | 16 |
musculoskeletal system | 1.53e-13 | 32 |
hemolymphoid system | 2.90e-11 | 48 |
immune system | 2.90e-11 | 48 |
hematopoietic system | 2.76e-08 | 45 |
blood island | 2.76e-08 | 45 |
connective tissue | 5.02e-08 | 46 |