FFCP PHASE1:Mm9::chr19:56623069..56623113,+: Difference between revisions
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{{FFCP|EntrezGene=66866|HGNC=|MCL_coexpression_id=1408|UniProt=Q8BZW8,F6ZR71,B2RR26|association_with_transcript=318bp_to_ENSMUST00000071423,ENSMUST00000165411,NM_025811,uc008hzc.1_5end|description=CAGE_peak_3_at_Nhlrc2_5end|id=chr19:56623069..56623113,+|ontology_enrichment_celltype=CL:0000066!1.18e-07!25;CL:0002563!2.47e-07!9;CL:0002251!2.47e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,4.73e-08,25;CL:0002563,2.06e-07,9;CL:0002251,2.06e-07,9;CL:0000223,4.13e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.02e-15!43;UBERON:0004119!2.42e-13!130;UBERON:0000925!2.42e-13!130;UBERON:0006595!2.42e-13!130;UBERON:0001007!5.90e-13!128;UBERON:0001555!5.90e-13!128;UBERON:0007026!5.90e-13!128;UBERON:0005409!2.01e-12!59;UBERON:0004921!5.26e-12!126;UBERON:0004185!5.26e-12!126;UBERON:0003914!3.91e-11!47;UBERON:0000344!1.02e-08!15;UBERON:0002100!6.43e-08!98;UBERON:0001242!1.45e-07!13;UBERON:0000060!1.45e-07!13;UBERON:0001262!1.45e-07!13;UBERON:0004786!1.45e-07!13;UBERON:0009854!2.01e-07!23;UBERON:0009856!2.01e-07!23;UBERON:0009569!2.26e-07!66;UBERON:0003350!2.47e-07!9;UBERON:0004808!2.47e-07!9;UBERON:0001277!2.47e-07!9;UBERON:0000466!2.90e-07!79;UBERON:0002107!6.60e-07!22;UBERON:0007499!6.60e-07!22;UBERON:0006925!6.60e-07!22;UBERON:0009497!6.60e-07!22;UBERON:0000015!6.60e-07!22;UBERON:0002423!6.60e-07!22;UBERON:0006235!6.60e-07!22;UBERON:0008835!6.60e-07!22;UBERON:0003894!6.60e-07!22;UBERON:0004161!6.60e-07!22;UBERON:0008836!6.60e-07!22;UBERON:0002365!9.67e-07!25;UBERON:0002330!9.67e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.06e-14,31;UBERON:0003914,2.91e-11,47;UBERON:0004119,4.62e-11,118;UBERON:0000925,4.62e-11,118;UBERON:0006595,4.62e-11,118;UBERON:0002100,6.14e-11,90;UBERON:0001007,1.05e-10,116;UBERON:0001555,1.05e-10,116;UBERON:0007026,1.05e-10,116;UBERON:0005409,1.79e-10,47;UBERON:0004921,7.82e-10,114;UBERON:0005177,3.80e-09,79;UBERON:0000344,8.19e-09,15;UBERON:0001242,1.20e-07,13;UBERON:0001262,1.20e-07,13;UBERON:0004786,1.20e-07,13;UBERON:0009854,1.68e-07,23;UBERON:0009856,1.68e-07,23;UBERON:0003350,2.06e-07,9;UBERON:0004808,2.06e-07,9;UBERON:0001277,2.06e-07,9;UBERON:0009569,2.24e-07,66;UBERON:0002107,5.58e-07,22;UBERON:0007499,5.58e-07,22;UBERON:0006925,5.58e-07,22;UBERON:0009497,5.58e-07,22;UBERON:0000015,5.58e-07,22;UBERON:0002423,5.58e-07,22;UBERON:0006235,5.58e-07,22;UBERON:0008835,5.58e-07,22;UBERON:0003894,5.58e-07,22;UBERON:0004161,5.58e-07,22;UBERON:0008836,5.58e-07,22|phase1_expression=1.28119077683835,17.0997949743287,20.4749657725291,17.5429242557961,14.0250804384977,16.2842893754533,15.4184342793047,0.387369970324729,1.54867594366833,0.70219357896598,0.34243593645101,0.558405112967355,0,0.0874204024189974,1.66554880907831,0.607425802169478,2.09868563438444,0.473193248037357,0.685572168028694,1.27316895539409,2.97651515528744,2.48227378002213,1.30599894569468,6.87967418011649,9.63518980482114,14.9300310669905,15.0766698655676,11.2045040996662,5.51067916423484,4.03248207615889,6.20845429834853,1.27006134691926,1.23012957516914,0,8.66554859253824,6.81562045969819,10.6168065256432,3.34825304589526,1.5626706890476,2.09409497589519,4.70585190424811,2.73218193983378,2.42755176515577,3.39921408534059,3.04130793658544,3.30384153891027,0.782391344348039,0.436050312760893,1.75748946187577,2.13872888981712,1.25987779462826,1.43752564364972,0.671130424230945,1.45072428402269,0,5.65970759279083,4.01146815914259,4.64104883049698,0,0,0.633831403506179,1.69422266034566,0,2.6996991518442,1.97773272513395,2.1314403448383,1.49800055259202,0,0.414758449233911,0.270011876663381,0.210324961351382,0.571301968807607,0.662605622854841,0.244981598429908,0.383381884072945,0,1.10115880999389,0.383062014255563,0.921639199537461,0.527545150920775,0.274462930807229,0.52091337055676,0.279182999001381,0,0.45839474333043,0.294628585473668,1.13897344639282,0.186399445825301,4.31639301999149,3.17400552448499,6.66688324013859,3.44169550792555,4.0798280022465,5.39703191637817,4.54843492213368,4.48026887097336,3.65155492342555,3.40860645156115,3.37721805983729,2.12003744706204,2.25349471642689,2.56652954828636,0,0,3.68034769719064,4.30711771307668,3.53867111510348,4.79572294820052,3.36619248741323,1.63286352971307,1.73485326766136,3.04465478312141,2.07553947530453,1.95939432718409,1.41106448562846,2.13633205260448,7.16865406429684,3.61498392299779,3.5384422077995,2.26473589926373,1.54589062922275,1.93950101254089,7.45567044872489,0,0.628340120440365,5.36459815938042,1.67741174308288,1.19980546198682,2.03312363316904,0,0.915001205637253,0,0.173824320192276,0.511430914660661,0.41557608911912,0.162241263067758,1.73126918545538,2.36373244159177,3.28539585963777,1.68353484709179,1.04096354370163,0.459804208866946,1.44049703844279,0.60281927134286,1.42876648217788,0.896796041993948,1.40552586839593,1.29351685369508,1.72454394346274,1.32374256117473,0.703804496655795,0.876782929710299,0.556094498451196,1.39300866608867,2.46938563689532,1.99034266818493,1.4044263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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66866 | |||
|HGNC= | |||
|MCL_coexpression_id=1408 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BZW8,F6ZR71,B2RR26 | |||
|association_with_transcript=318bp_to_ENSMUST00000071423,ENSMUST00000165411,NM_025811,uc008hzc.1_5end | |||
|cluster_id=chr19:56623069..56623113,+ | |||
|description=CAGE_peak_3_at_Nhlrc2_5end | |||
|id=chr19:56623069..56623113,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.18e-07!25;CL:0002563!2.47e-07!9;CL:0002251!2.47e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.73e-08,25;CL:0002563,2.06e-07,9;CL:0002251,2.06e-07,9;CL:0000223,4.13e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.02e-15!43;UBERON:0004119!2.42e-13!130;UBERON:0000925!2.42e-13!130;UBERON:0006595!2.42e-13!130;UBERON:0001007!5.90e-13!128;UBERON:0001555!5.90e-13!128;UBERON:0007026!5.90e-13!128;UBERON:0005409!2.01e-12!59;UBERON:0004921!5.26e-12!126;UBERON:0004185!5.26e-12!126;UBERON:0003914!3.91e-11!47;UBERON:0000344!1.02e-08!15;UBERON:0002100!6.43e-08!98;UBERON:0001242!1.45e-07!13;UBERON:0000060!1.45e-07!13;UBERON:0001262!1.45e-07!13;UBERON:0004786!1.45e-07!13;UBERON:0009854!2.01e-07!23;UBERON:0009856!2.01e-07!23;UBERON:0009569!2.26e-07!66;UBERON:0003350!2.47e-07!9;UBERON:0004808!2.47e-07!9;UBERON:0001277!2.47e-07!9;UBERON:0000466!2.90e-07!79;UBERON:0002107!6.60e-07!22;UBERON:0007499!6.60e-07!22;UBERON:0006925!6.60e-07!22;UBERON:0009497!6.60e-07!22;UBERON:0000015!6.60e-07!22;UBERON:0002423!6.60e-07!22;UBERON:0006235!6.60e-07!22;UBERON:0008835!6.60e-07!22;UBERON:0003894!6.60e-07!22;UBERON:0004161!6.60e-07!22;UBERON:0008836!6.60e-07!22;UBERON:0002365!9.67e-07!25;UBERON:0002330!9.67e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.06e-14,31;UBERON:0003914,2.91e-11,47;UBERON:0004119,4.62e-11,118;UBERON:0000925,4.62e-11,118;UBERON:0006595,4.62e-11,118;UBERON:0002100,6.14e-11,90;UBERON:0001007,1.05e-10,116;UBERON:0001555,1.05e-10,116;UBERON:0007026,1.05e-10,116;UBERON:0005409,1.79e-10,47;UBERON:0004921,7.82e-10,114;UBERON:0005177,3.80e-09,79;UBERON:0000344,8.19e-09,15;UBERON:0001242,1.20e-07,13;UBERON:0001262,1.20e-07,13;UBERON:0004786,1.20e-07,13;UBERON:0009854,1.68e-07,23;UBERON:0009856,1.68e-07,23;UBERON:0003350,2.06e-07,9;UBERON:0004808,2.06e-07,9;UBERON:0001277,2.06e-07,9;UBERON:0009569,2.24e-07,66;UBERON:0002107,5.58e-07,22;UBERON:0007499,5.58e-07,22;UBERON:0006925,5.58e-07,22;UBERON:0009497,5.58e-07,22;UBERON:0000015,5.58e-07,22;UBERON:0002423,5.58e-07,22;UBERON:0006235,5.58e-07,22;UBERON:0008835,5.58e-07,22;UBERON:0003894,5.58e-07,22;UBERON:0004161,5.58e-07,22;UBERON:0008836,5.58e-07,22 | |||
|phase1_expression=1.28119077683835,17.0997949743287,20.4749657725291,17.5429242557961,14.0250804384977,16.2842893754533,15.4184342793047,0.387369970324729,1.54867594366833,0.70219357896598,0.34243593645101,0.558405112967355,0,0.0874204024189974,1.66554880907831,0.607425802169478,2.09868563438444,0.473193248037357,0.685572168028694,1.27316895539409,2.97651515528744,2.48227378002213,1.30599894569468,6.87967418011649,9.63518980482114,14.9300310669905,15.0766698655676,11.2045040996662,5.51067916423484,4.03248207615889,6.20845429834853,1.27006134691926,1.23012957516914,0,8.66554859253824,6.81562045969819,10.6168065256432,3.34825304589526,1.5626706890476,2.09409497589519,4.70585190424811,2.73218193983378,2.42755176515577,3.39921408534059,3.04130793658544,3.30384153891027,0.782391344348039,0.436050312760893,1.75748946187577,2.13872888981712,1.25987779462826,1.43752564364972,0.671130424230945,1.45072428402269,0,5.65970759279083,4.01146815914259,4.64104883049698,0,0,0.633831403506179,1.69422266034566,0,2.6996991518442,1.97773272513395,2.1314403448383,1.49800055259202,0,0.414758449233911,0.270011876663381,0.210324961351382,0.571301968807607,0.662605622854841,0.244981598429908,0.383381884072945,0,1.10115880999389,0.383062014255563,0.921639199537461,0.527545150920775,0.274462930807229,0.52091337055676,0.279182999001381,0,0.45839474333043,0.294628585473668,1.13897344639282,0.186399445825301,4.31639301999149,3.17400552448499,6.66688324013859,3.44169550792555,4.0798280022465,5.39703191637817,4.54843492213368,4.48026887097336,3.65155492342555,3.40860645156115,3.37721805983729,2.12003744706204,2.25349471642689,2.56652954828636,0,0,3.68034769719064,4.30711771307668,3.53867111510348,4.79572294820052,3.36619248741323,1.63286352971307,1.73485326766136,3.04465478312141,2.07553947530453,1.95939432718409,1.41106448562846,2.13633205260448,7.16865406429684,3.61498392299779,3.5384422077995,2.26473589926373,1.54589062922275,1.93950101254089,7.45567044872489,0,0.628340120440365,5.36459815938042,1.67741174308288,1.19980546198682,2.03312363316904,0,0.915001205637253,0,0.173824320192276,0.511430914660661,0.41557608911912,0.162241263067758,1.73126918545538,2.36373244159177,3.28539585963777,1.68353484709179,1.04096354370163,0.459804208866946,1.44049703844279,0.60281927134286,1.42876648217788,0.896796041993948,1.40552586839593,1.29351685369508,1.72454394346274,1.32374256117473,0.703804496655795,0.876782929710299,0.556094498451196,1.39300866608867,2.46938563689532,1.99034266818493,1.40442637462647,1.54408744268829,4.26245249093389,2.48550927042602,2.81431271977315,2.52086886045421,2.60419209143731,5.1158700254325,2.93107514486019,3.48800917125612,4.82892122519315,4.55384835231961,5.59503489705834,5.08919138645195,4.05344047729279,3.50879969820798,4.83010253640311,5.36825675041487,0.630869845692382,1.13195073617213,1.65209391491899,9.25576983322405,1.70630600428187,2.78684006232526,3.99489130098489,7.66397393568702,6.44896327150124,6.08722003560189,6.16887780007865,8.23494773620054,6.53471542880701,7.56034593756373,6.82374304916921,2.69645822596266,6.26800344636613,7.16908583715722,2.46568271239006,2.39921876480431,1.1270773567308,1.62921062276251,2.71533482034676,2.31448205638051,4.93244989569207,3.83786384746966,4.08196692387575,4.31890073726302,9.48648406678877,1.66845105716094,3.14494392181125,1.79889689907883,2.84004169943904,1.92941727801933,3.31013607315846,3.74004978686054,7.13394997810156,7.4131581560782,10.0637744569148,7.07067800570156,8.11297950097858,5.05157755894223,5.74071723270119,7.71909634181387,3.69506380333209,1.89491411770485,1.79261474086228,2.71592137240301,2.81628297946203,4.02015017860358,6.18913466303636,7.80534591431195,4.72905432318573,5.09368786192182,6.05928120898451,3.93271955317771,3.7990696010497,4.33947175744535,4.52373851817817,4.35124547054968,0.983528546038072,3.31124095565679,0.642202359951168,0.820481806145422,2.45902418065013,2.01976741763498,2.52406575533005,3.90438744296638,4.09304455692318,4.54040716109849,2.89638276307112,3.11384183867716,4.04810701674894,2.33804686329049,3.16230222357219,0,1.84522110770749,1.42452482933804,2.28041743095006,4.78413356620353,2.65490276679926,1.45668381692989,3.02323556964751,3.20628635585027,3.54362271456927,3.3817866273832,4.39328098385976,4.36240475373007,4.9909632973861,4.10847785316561,3.16255825724996,3.09406629744561,1.02131881726136,0.900305470156551,1.29358683782755,1.92903331528433,0.886701168211368,1.60531935841864,0.987294123612726,1.522324745573,3.28540391289194,3.38931313382112,5.51320995137405,2.30840754118072,1.45317984026315,2.0506394475573,0.954978752025092,2.46211349617592,6.12109756922687,0.556275906031529,1.19609616558497,1.857481811669,2.22233432843654,0.753473828018764,1.6403307326523,2.97411625168479,1.69978429993855,1.11961161858926,1.24379976423981,0.954670618015114,0.790839983952838,1.82987520414164,3.45617090629764,3.3454127362315,2.40198820120795,2.83215127408124,4.54594006489348,2.87931536182433,6.48074866458964,4.97071450469541,0.5636929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| |||
|short_description=p3@Nhlrc2 | |||
}} |
Latest revision as of 00:16, 26 September 2015
Short description: | p3@Nhlrc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nhlrc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1408 |
Association with transcript: | 318bp_to_ENSMUST00000071423, ENSMUST00000165411, NM_025811, uc008hzc.1_5end |
EntrezGene: | Nhlrc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.73e-08 | 25 |
intestinal epithelial cell | 2.06e-07 | 9 |
epithelial cell of alimentary canal | 2.06e-07 | 9 |
endodermal cell | 4.13e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.06e-14 | 31 |
epithelial tube | 2.91e-11 | 47 |
endoderm-derived structure | 4.62e-11 | 118 |
endoderm | 4.62e-11 | 118 |
presumptive endoderm | 4.62e-11 | 118 |
trunk | 6.14e-11 | 90 |
digestive system | 1.05e-10 | 116 |
digestive tract | 1.05e-10 | 116 |
primitive gut | 1.05e-10 | 116 |
gastrointestinal system | 1.79e-10 | 47 |
subdivision of digestive tract | 7.82e-10 | 114 |
trunk region element | 3.80e-09 | 79 |
mucosa | 8.19e-09 | 15 |
intestinal mucosa | 1.20e-07 | 13 |
wall of intestine | 1.20e-07 | 13 |
gastrointestinal system mucosa | 1.20e-07 | 13 |
digestive tract diverticulum | 1.68e-07 | 23 |
sac | 1.68e-07 | 23 |
epithelium of mucosa | 2.06e-07 | 9 |
gastrointestinal system epithelium | 2.06e-07 | 9 |
intestinal epithelium | 2.06e-07 | 9 |
subdivision of trunk | 2.24e-07 | 66 |
liver | 5.58e-07 | 22 |
epithelial sac | 5.58e-07 | 22 |
digestive gland | 5.58e-07 | 22 |
epithelium of foregut-midgut junction | 5.58e-07 | 22 |
anatomical boundary | 5.58e-07 | 22 |
hepatobiliary system | 5.58e-07 | 22 |
foregut-midgut junction | 5.58e-07 | 22 |
hepatic diverticulum | 5.58e-07 | 22 |
liver primordium | 5.58e-07 | 22 |
septum transversum | 5.58e-07 | 22 |
liver bud | 5.58e-07 | 22 |