FFCP PHASE1:Mm9::chr19:56536144..56536158,+: Difference between revisions
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|id=chr19:56536144..56536158,+
|short_description=p3@9930023K05Rik
|description=CAGE_peak_3_at_9930023K05Rik_5end
|association_with_transcript=17bp_to_ENSMUST000000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=226245 | |EntrezGene=226245 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=27 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BW88 | |UniProt=Q8BW88 | ||
|association_with_transcript=17bp_to_ENSMUST00000039666,NM_001164263,NM_172641,uc008hyy.2,uc008hyz.2_5end | |||
|cluster_id=chr19:56536144..56536158,+ | |||
|description=CAGE_peak_3_at_9930023K05Rik_5end | |||
|id=chr19:56536144..56536158,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,8.56e-10,3;CL:0000066,3.64e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.18e-10!59;UBERON:0003100!2.13e-08!11;UBERON:0000160!2.94e-08!43;UBERON:0001045!3.04e-08!13;UBERON:0007023!1.41e-07!51;UBERON:0001264!3.51e-07!12;UBERON:0003922!3.51e-07!12;UBERON:0002114!3.51e-07!12;UBERON:0003923!3.51e-07!12;UBERON:0003924!3.51e-07!12;UBERON:0003921!3.51e-07!12;UBERON:0002553!4.62e-07!39;UBERON:0001007!8.37e-07!128;UBERON:0001555!8.37e-07!128;UBERON:0007026!8.37e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003100,1.94e-09,11;UBERON:0000992,3.78e-09,3;UBERON:0005156,2.10e-08,26;UBERON:0000990,2.10e-08,26;UBERON:0000474,2.43e-08,9;UBERON:0000080,5.79e-08,4;UBERON:0005904,5.79e-08,4;UBERON:0006947,5.79e-08,4;UBERON:0002120,5.79e-08,4;UBERON:0004054,5.79e-08,4;UBERON:0004875,5.79e-08,4;UBERON:0004876,5.79e-08,4;UBERON:0005721,5.79e-08,4;UBERON:0005754,5.79e-08,4;UBERON:0007297,5.79e-08,4;UBERON:0010147,6.89e-08,2;UBERON:0003937,6.89e-08,2;UBERON:0005399,6.89e-08,2;UBERON:0007023,7.51e-08,51;UBERON:0000058,1.57e-07,7;UBERON:0002553,3.12e-07,39;UBERON:0001962,3.38e-07,2;UBERON:0001961,3.38e-07,2;UBERON:0001744,3.38e-07,2;UBERON:0000344,6.09e-07,15 | |||
|phase1_expression=0,2.09385244583617,1.81999695755814,0,0.500895729946347,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,2.07990149631429,1.83527424853736,1.14846392823004,2.15380998079537,2.15471232685889,0,0,4.43461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.29894624606728,0,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.203678727700633,1.8661045591514,2.27450482590307,0.631325567659422,0,0,0,0,0,0,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0,0,0.432276099749388,0.199141273254367,0.379335801906163,0.114248512609729,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,1.37968373152366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,1.24645922567079,1.30309567482861,6.76377504187395,1.32745138339963,0,0,3.01768127609437,0.590603785761546,0.307435147943927,0.516856586336442,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,42.5619808246077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0,0,0.87345025498471,1.07891477107857,1.73572257023205,0.785267825952089,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,7.50921659495787,0.643105137237198,26.5833215138743,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0.290692833264657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.09385244583617,1.81999695755814,0,0.500895729946347,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,2.07990149631429,1.83527424853736,1.14846392823004,2.15380998079537,2.15471232685889,0,0,4.43461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.29894624606728,0,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.203678727700633,1.8661045591514,2.27450482590307,0.631325567659422,0,0,0,0,0,0,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0,0,0.432276099749388,0.199141273254367,0.379335801906163,0.114248512609729,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,1.37968373152366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,1.24645922567079,1.30309567482861,6.76377504187395,1.32745138339963,0,0,3.01768127609437,0.590603785761546,0.307435147943927,0.516856586336442,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,42.5619808246077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0,0,0.87345025498471,1.07891477107857,1.73572257023205,0.785267825952089,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,7.50921659495787,0.643105137237198,26.5833215138743,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0.290692833264657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@9930023K05Rik | |||
}} | }} |
Latest revision as of 00:13, 26 September 2015
Short description: | p3@9930023K05Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_9930023K05Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:27 |
Association with transcript: | 17bp_to_ENSMUST00000039666, NM_001164263, NM_172641, uc008hyy.2, uc008hyz.2_5end |
EntrezGene: | 9930023K05Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 8.56e-10 | 3 |
epithelial cell | 3.64e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
female organism | 1.94e-09 | 11 |
female gonad | 3.78e-09 | 3 |
reproductive structure | 2.10e-08 | 26 |
reproductive system | 2.10e-08 | 26 |
female reproductive system | 2.43e-08 | 9 |
mesonephros | 5.79e-08 | 4 |
duct of male reproductive system | 5.79e-08 | 4 |
male genital duct | 5.79e-08 | 4 |
pronephros | 5.79e-08 | 4 |
internal male genitalia | 5.79e-08 | 4 |
nephrogenic cord | 5.79e-08 | 4 |
urogenital ridge | 5.79e-08 | 4 |
pronephric mesoderm | 5.79e-08 | 4 |
rostral part of nephrogenic cord | 5.79e-08 | 4 |
presumptive pronephric mesoderm | 5.79e-08 | 4 |
male accessory sex gland | 6.89e-08 | 2 |
sex gland | 6.89e-08 | 2 |
male reproductive gland | 6.89e-08 | 2 |
adult organism | 7.51e-08 | 51 |
duct | 1.57e-07 | 7 |
anatomical cavity | 3.12e-07 | 39 |
gut-associated lymphoid tissue | 3.38e-07 | 2 |
mucosa-associated lymphoid tissue | 3.38e-07 | 2 |
lymphoid tissue | 3.38e-07 | 2 |
mucosa | 6.09e-07 | 15 |