Personal tools

FFCP PHASE1:Mm9::chr10:36226640..36226652,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr10:36226640..36226652,+ |short_description=p1@Hs3st5 |description=CAGE_peak_1_at_Hs3st5_5end |association_with_transcript=15bp_to_ENSMUST00000058738_5end |E...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr10:36226640..36226652,+
|DHSsupport=NA
|short_description=p1@Hs3st5
|DPIdataset=NA
|description=CAGE_peak_1_at_Hs3st5_5end
|association_with_transcript=15bp_to_ENSMUST00000058738_5end
|EntrezGene=319415
|EntrezGene=319415
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q8BSL4
|UniProt=Q8BSL4
|association_with_transcript=15bp_to_ENSMUST00000058738_5end
|cluster_id=chr10:36226640..36226652,+
|description=CAGE_peak_1_at_Hs3st5_5end
|id=chr10:36226640..36226652,+
|ontology_enrichment_celltype=CL:0000540!2.70e-17!33;CL:0000047!2.70e-17!33;CL:0000031!2.70e-17!33;CL:0000404!2.70e-17!33;CL:0000117!8.92e-15!23;CL:0000337!8.92e-15!23;CL:0000393!5.68e-12!39;CL:0000211!5.68e-12!39;CL:0002319!6.45e-11!43;CL:0000221!7.61e-11!44;CL:0000133!7.61e-11!44;CL:0000055!2.98e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.75e-20,23;CL:0000337,1.75e-20,23;CL:0000540,7.05e-20,33;CL:0000047,7.05e-20,33;CL:0000031,7.05e-20,33;CL:0000404,7.05e-20,33;CL:0000393,2.04e-15,39;CL:0000211,2.04e-15,39;CL:0002319,3.66e-13,43;CL:0000221,1.14e-12,44;CL:0000133,1.14e-12,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!7.55e-28!102;UBERON:0000924!7.55e-28!102;UBERON:0006601!7.55e-28!102;UBERON:0001017!3.40e-26!73;UBERON:0005743!3.40e-26!73;UBERON:0000073!7.66e-26!75;UBERON:0001016!7.66e-26!75;UBERON:0002346!5.91e-24!71;UBERON:0003075!5.91e-24!71;UBERON:0007284!5.91e-24!71;UBERON:0000033!2.41e-21!63;UBERON:0001049!2.30e-20!52;UBERON:0005068!2.30e-20!52;UBERON:0006241!2.30e-20!52;UBERON:0007135!2.30e-20!52;UBERON:0000955!1.62e-18!50;UBERON:0006238!1.62e-18!50;UBERON:0003056!2.41e-18!49;UBERON:0002616!9.50e-18!49;UBERON:0003080!2.91e-15!40;UBERON:0002780!1.36e-14!39;UBERON:0001890!1.36e-14!39;UBERON:0006240!1.36e-14!39;UBERON:0002020!2.49e-14!34;UBERON:0000153!4.50e-14!94;UBERON:0007811!1.29e-12!86;UBERON:0002791!7.90e-11!29;UBERON:0003528!7.90e-11!29;UBERON:0001893!7.90e-11!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.32e-34,73;UBERON:0001016,1.94e-32,75;UBERON:0000073,1.17e-29,54;UBERON:0004121,7.28e-29,95;UBERON:0000924,7.28e-29,95;UBERON:0006601,7.28e-29,95;UBERON:0001049,7.33e-28,52;UBERON:0005068,7.33e-28,52;UBERON:0006241,7.33e-28,52;UBERON:0007135,7.33e-28,52;UBERON:0002346,8.53e-28,64;UBERON:0003075,8.53e-28,64;UBERON:0007284,8.53e-28,64;UBERON:0010371,1.12e-23,73;UBERON:0000955,3.39e-22,47;UBERON:0006238,3.39e-22,47;UBERON:0002616,4.89e-21,46;UBERON:0003056,1.05e-20,49;UBERON:0003080,8.97e-19,40;UBERON:0002780,9.37e-18,39;UBERON:0001890,9.37e-18,39;UBERON:0006240,9.37e-18,39;UBERON:0002020,1.09e-17,34;UBERON:0010314,2.57e-17,92;UBERON:0003528,2.09e-12,29;UBERON:0002791,2.09e-12,29;UBERON:0001893,2.09e-12,29;UBERON:0003076,9.69e-10,12;UBERON:0003057,9.69e-10,12;UBERON:0002420,1.25e-09,8;UBERON:0007245,1.25e-09,8;UBERON:0010009,1.25e-09,8;UBERON:0010011,1.25e-09,8;UBERON:0000454,1.25e-09,8;UBERON:0002240,1.29e-08,6;UBERON:0005174,1.29e-08,6;UBERON:0001137,1.29e-08,6;UBERON:0001948,1.64e-07,5;UBERON:0002315,1.64e-07,5;UBERON:0002021,3.17e-07,10;UBERON:0000411,3.17e-07,10;UBERON:0001950,3.17e-07,10
|phase1_expression=1.44133962394315,0,0,0,0.500895729946347,0,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05791152148994,6.87688273053643,5.70448263155561,0.677689064138264,0,0,0,0,0.299600110518405,0,2.48855069540346,2.56511282830212,1.89292465216244,5.42736870367227,5.96345060569357,0.979926393719632,0.479227355091182,1.83843757322004,2.20231761998777,2.42605942361857,3.22573719838111,3.03338461779446,2.92760459527711,2.6045668527838,5.30447698102624,3.37657566019008,2.13917546887534,3.53554302568401,5.26775218956681,9.13357284543973,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,1.04091196059682,0.913396434936424,0,1.20578112442098,0.470354828542819,0.251333182659351,0,0.144599356919912,0,0.323533699894818,0,0.484875253135222,0,2.92780797011547,2.30391377494801,0,0,0,0,3.74476598512057,5.03250663100489,3.26701315493447,0.695297280769106,2.30143911597297,2.70124457927428,4.05603157669394,0.305518091550949,0.373220911830279,0.505445516867349,0.631325567659422,2.34216797332867,1.14951052216736,1.0803727788321,0.90422890701429,1.36072998302656,2.17793324484245,1.87403449119458,0.776110112217047,1.72454394346274,0.378212160335639,1.05570674498369,0.43839146485515,1.11218899690239,2.089512999133,0.823128545631774,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0.590292695242212,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0.660837565967596,0.264450566663544,0,0.696710015581316,0.77320476793256,0.403367049246685,0.667134131534611,0.951128130562796,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0,3.53211297973142,2.34423373184406,0,0,0.631016438832513,0.390438744296638,0.646270193198397,0.238968797952552,0.891194696329576,1.98153571552183,4.45291771842384,3.50707029493574,2.37172666767914,9.3183181762324,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0.377210159511796,0,0,0,0,0.356497378384721,0,0,0,1.36175842301515,1.26042765821917,1.16422815404479,1.92903331528433,1.59606210278046,1.07021290561242,1.81003922662333,0.304464949114599,0,0,0,0.32977250588296,0.322928853391811,0.180938774784468,0.238744688006273,0.656563598980245,0,3.8939313422207,0,0.82554747185289,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.86404272657441,0.209088296014469,0.436725127492355,0.404593039154462,0.661227645802687,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0,0,0,0,0.316011120628178,0,0.308132871494482,0.129920822977795,0.358053391334963,0,0.240390899039938,0.295379054349154,0,0,0.302478555410522,0.0974578807397524,0.192423683280659,0.116876902181569,0.453460767230423,0,0,0,0,0.187682475451182,1.28206136987086,1.50057865355346,0,3.3885110557024,1.38097570952153,1.71868654031819,2.40594455281163,4.7955776383945,1.5107877947794,1.35004500046361,1.35096360967266,0.906284817968409,2.5888015587591,0,1.99512436700516,2.73173769206615,1.45864030240976,0.838452650511929,0.367687016900028,1.33348036680969,1.44224540067226,2.24643446714271,0.505394423527595,2.78827229879264,0.943131706930381,0.842773567228942,0.960377286073039,0.861532034334199,0.952587382566147,1.62238056322798,1.54327376370964,2.47251540481984,1.61918812147837,1.02860775715625,0.532427418478012,0.953744759789284,0.726732083161643,1.41164070622996,1.4384483341585,0.914639864363863,0.789209134313529,1.49384525230448,0.561142271657738,1.42362021749009,1.18205378850676,1.22769312950907,1.23949472948773,0.771626443924566,1.99848462350357,1.16965804222704,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421
|phase1_expression=1.44133962394315,0,0,0,0.500895729946347,0,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05791152148994,6.87688273053643,5.70448263155561,0.677689064138264,0,0,0,0,0.299600110518405,0,2.48855069540346,2.56511282830212,1.89292465216244,5.42736870367227,5.96345060569357,0.979926393719632,0.479227355091182,1.83843757322004,2.20231761998777,2.42605942361857,3.22573719838111,3.03338461779446,2.92760459527711,2.6045668527838,5.30447698102624,3.37657566019008,2.13917546887534,3.53554302568401,5.26775218956681,9.13357284543973,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,1.04091196059682,0.913396434936424,0,1.20578112442098,0.470354828542819,0.251333182659351,0,0.144599356919912,0,0.323533699894818,0,0.484875253135222,0,2.92780797011547,2.30391377494801,0,0,0,0,3.74476598512057,5.03250663100489,3.26701315493447,0.695297280769106,2.30143911597297,2.70124457927428,4.05603157669394,0.305518091550949,0.373220911830279,0.505445516867349,0.631325567659422,2.34216797332867,1.14951052216736,1.0803727788321,0.90422890701429,1.36072998302656,2.17793324484245,1.87403449119458,0.776110112217047,1.72454394346274,0.378212160335639,1.05570674498369,0.43839146485515,1.11218899690239,2.089512999133,0.823128545631774,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0.590292695242212,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0.660837565967596,0.264450566663544,0,0.696710015581316,0.77320476793256,0.403367049246685,0.667134131534611,0.951128130562796,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0,3.53211297973142,2.34423373184406,0,0,0.631016438832513,0.390438744296638,0.646270193198397,0.238968797952552,0.891194696329576,1.98153571552183,4.45291771842384,3.50707029493574,2.37172666767914,9.3183181762324,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0.377210159511796,0,0,0,0,0.356497378384721,0,0,0,1.36175842301515,1.26042765821917,1.16422815404479,1.92903331528433,1.59606210278046,1.07021290561242,1.81003922662333,0.304464949114599,0,0,0,0.32977250588296,0.322928853391811,0.180938774784468,0.238744688006273,0.656563598980245,0,3.8939313422207,0,0.82554747185289,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.86404272657441,0.209088296014469,0.436725127492355,0.404593039154462,0.661227645802687,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0,0,0,0,0.316011120628178,0,0.308132871494482,0.129920822977795,0.358053391334963,0,0.240390899039938,0.295379054349154,0,0,0.302478555410522,0.0974578807397524,0.192423683280659,0.116876902181569,0.453460767230423,0,0,0,0,0.187682475451182,1.28206136987086,1.50057865355346,0,3.3885110557024,1.38097570952153,1.71868654031819,2.40594455281163,4.7955776383945,1.5107877947794,1.35004500046361,1.35096360967266,0.906284817968409,2.5888015587591,0,1.99512436700516,2.73173769206615,1.45864030240976,0.838452650511929,0.367687016900028,1.33348036680969,1.44224540067226,2.24643446714271,0.505394423527595,2.78827229879264,0.943131706930381,0.842773567228942,0.960377286073039,0.861532034334199,0.952587382566147,1.62238056322798,1.54327376370964,2.47251540481984,1.61918812147837,1.02860775715625,0.532427418478012,0.953744759789284,0.726732083161643,1.41164070622996,1.4384483341585,0.914639864363863,0.789209134313529,1.49384525230448,0.561142271657738,1.42362021749009,1.18205378850676,1.22769312950907,1.23949472948773,0.771626443924566,1.99848462350357,1.16965804222704,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421
|short_description=p1@Hs3st5
}}
}}

Latest revision as of 23:29, 25 September 2015

Short description:p1@Hs3st5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hs3st5_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 15bp_to_ENSMUST00000058738_5end
EntrezGene:Hs3st5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hs3st5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.13
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.75e-2023
neuroblast (sensu Vertebrata)1.75e-2023
neuron7.05e-2033
neuronal stem cell7.05e-2033
neuroblast7.05e-2033
electrically signaling cell7.05e-2033
electrically responsive cell2.04e-1539
electrically active cell2.04e-1539
neural cell3.66e-1343
ectodermal cell1.14e-1244
neurectodermal cell1.14e-1244

Uber anatomy
Ontology termp-valuen
central nervous system8.32e-3473
nervous system1.94e-3275
regional part of nervous system1.17e-2954
ectoderm-derived structure7.28e-2995
ectoderm7.28e-2995
presumptive ectoderm7.28e-2995
neural tube7.33e-2852
neural rod7.33e-2852
future spinal cord7.33e-2852
neural keel7.33e-2852
neurectoderm8.53e-2864
neural plate8.53e-2864
presumptive neural plate8.53e-2864
ecto-epithelium1.12e-2373
brain3.39e-2247
future brain3.39e-2247
regional part of brain4.89e-2146
pre-chordal neural plate1.05e-2049
anterior neural tube8.97e-1940
regional part of forebrain9.37e-1839
forebrain9.37e-1839
future forebrain9.37e-1839
gray matter1.09e-1734
structure with developmental contribution from neural crest2.57e-1792
brain grey matter2.09e-1229
regional part of telencephalon2.09e-1229
telencephalon2.09e-1229
posterior neural tube9.69e-1012
chordal neural plate9.69e-1012
basal ganglion1.25e-098
nuclear complex of neuraxis1.25e-098
aggregate regional part of brain1.25e-098
collection of basal ganglia1.25e-098
cerebral subcortex1.25e-098
spinal cord1.29e-086
dorsal region element1.29e-086
dorsum1.29e-086
regional part of spinal cord1.64e-075
gray matter of spinal cord1.64e-075
occipital lobe3.17e-0710
visual cortex3.17e-0710
neocortex3.17e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:36226640..36226652,%2B&oldid=4220373"