FFCP PHASE1:Mm9::chr11:92960534..92960544,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72605 | |EntrezGene=72605 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=Q78UF4,P61215,Q3V1V7 | |UniProt=Q78UF4,P61215,Q3V1V7 | ||
|association_with_transcript=-59bp_to_ENSMUST00000092780,ENSMUST00000107863,NM_028296,uc007kxj.2_5end | |association_with_transcript=-59bp_to_ENSMUST00000092780,ENSMUST00000107863,NM_028296,uc007kxj.2_5end | ||
|cluster_id=chr11:92960534..92960544,+ | |||
|description=CAGE_peak_11_at_Car10_5end | |description=CAGE_peak_11_at_Car10_5end | ||
|id=chr11:92960534..92960544,+ | |id=chr11:92960534..92960544,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.77e-13!23;CL:0000337!1.77e-13!23;CL:0000540!1.73e-08!33;CL:0000047!1.73e-08!33;CL:0000031!1.73e-08!33;CL:0000404!1.73e-08!33;CL:0002614!8.39e-08!3;CL:0002612!4.78e-07!3;CL:0000393!9.59e-07!39;CL:0000211!9.59e-07!39 | |ontology_enrichment_celltype=CL:0000117!1.77e-13!23;CL:0000337!1.77e-13!23;CL:0000540!1.73e-08!33;CL:0000047!1.73e-08!33;CL:0000031!1.73e-08!33;CL:0000404!1.73e-08!33;CL:0002614!8.39e-08!3;CL:0002612!4.78e-07!3;CL:0000393!9.59e-07!39;CL:0000211!9.59e-07!39 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.64e-27!52;UBERON:0005068!2.64e-27!52;UBERON:0006241!2.64e-27!52;UBERON:0007135!2.64e-27!52;UBERON:0001017!1.31e-22!73;UBERON:0005743!1.31e-22!73;UBERON:0000073!8.35e-22!75;UBERON:0001016!8.35e-22!75;UBERON:0002346!3.79e-21!71;UBERON:0003075!3.79e-21!71;UBERON:0007284!3.79e-21!71;UBERON:0002616!1.26e-20!49;UBERON:0000955!4.32e-20!50;UBERON:0006238!4.32e-20!50;UBERON:0000033!4.59e-19!63;UBERON:0004121!1.39e-17!102;UBERON:0000924!1.39e-17!102;UBERON:0006601!1.39e-17!102;UBERON:0003076!2.40e-17!12;UBERON:0003057!2.40e-17!12;UBERON:0002020!1.33e-14!34;UBERON:0002298!1.09e-13!6;UBERON:0003080!1.70e-13!40;UBERON:0002240!6.78e-13!6;UBERON:0005174!6.78e-13!6;UBERON:0001137!6.78e-13!6;UBERON:0003056!8.01e-13!49;UBERON:0007811!3.32e-12!86;UBERON:0002780!3.77e-12!39;UBERON:0001890!3.77e-12!39;UBERON:0006240!3.77e-12!39;UBERON:0001948!9.31e-11!5;UBERON:0002315!9.31e-11!5;UBERON:0000153!1.29e-10!94;UBERON:0002950!6.63e-10!4;UBERON:0001891!6.63e-10!4;UBERON:0009616!6.63e-10!4;UBERON:0000025!9.60e-09!114;UBERON:0004111!1.64e-08!122;UBERON:0002791!2.48e-08!29;UBERON:0003528!2.48e-08!29;UBERON:0001893!2.48e-08!29;UBERON:0002038!8.39e-08!3;UBERON:0002308!8.39e-08!3;UBERON:0009663!8.39e-08!3;UBERON:0009661!8.39e-08!3;UBERON:0006331!8.39e-08!3;UBERON:0000125!8.39e-08!3;UBERON:0002257!4.78e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.72e-14,4;UBERON:0002680,8.72e-14,4;UBERON:0001895,8.72e-14,4;UBERON:0010092,8.72e-14,4;UBERON:0006215,8.72e-14,4;UBERON:0001851,1.16e-13,1;UBERON:0005889,1.16e-13,1;UBERON:0003076,3.87e-10,12;UBERON:0003057,3.87e-10,12;UBERON:0004733,1.61e-09,6;UBERON:0004732,1.61e-09,6;UBERON:0002028,1.61e-09,6;UBERON:0007277,1.61e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.893811366596314,0.307213066512487,0.131886287730194,0.182975287204819,0,1.3959149950069,0.56276261003168,0.61119299110724,0.294628585473668,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9772735491963,6.0739544975902,0,0,0,0,0.898743836428936,0,0,0.347648640384553,1.27857728665165,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0.51776031175182,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.893811366596314,0.307213066512487,0.131886287730194,0.182975287204819,0,1.3959149950069,0.56276261003168,0.61119299110724,0.294628585473668,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9772735491963,6.0739544975902,0,0,0,0,0.898743836428936,0,0,0.347648640384553,1.27857728665165,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0.51776031175182,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@Car10 | |short_description=p11@Car10 | ||
}} | }} |
Latest revision as of 23:21, 25 September 2015
Short description: | p11@Car10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Car10_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -59bp_to_ENSMUST00000092780, ENSMUST00000107863, NM_028296, uc007kxj.2_5end |
EntrezGene: | Car10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.72e-14 | 4 |
regional part of metencephalon | 8.72e-14 | 4 |
metencephalon | 8.72e-14 | 4 |
future metencephalon | 8.72e-14 | 4 |
rhombic lip | 8.72e-14 | 4 |
cortex | 1.16e-13 | 1 |
zygote cortex | 1.16e-13 | 1 |
posterior neural tube | 3.87e-10 | 12 |
chordal neural plate | 3.87e-10 | 12 |
segmental subdivision of hindbrain | 1.61e-09 | 6 |
segmental subdivision of nervous system | 1.61e-09 | 6 |
hindbrain | 1.61e-09 | 6 |
presumptive hindbrain | 1.61e-09 | 6 |